Blast performed on March-16-2010
BLASTP 2.2.13 [Nov-27-2005]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: uniref100 
           9,865,668 sequences; 3,466,105,457 total letters

Query= EG11277 thrL 
         (21 letters)

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef100_B7UI46 Thr operon leader peptide n=29 Tax=Enterobacter...    44   0.003 
UniRef100_C8TGD2 Thr operon leader peptide n=1 Tax=Escherichia c...    42   0.017 
UniRef100_D2TGH6 Thr operon leader peptide (Thr operon attenuato...    40   0.064 

>UniRef100_B7UI46 Thr operon leader peptide n=29
          Tax=Enterobacteriaceae RepID=LPT_ECO27
          Length = 21

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 21/21 (100%), Positives = 21/21 (100%)

Query: 1  MKRISTTITTTITITTGNGAG 21
          MKRISTTITTTITITTGNGAG
Sbjct: 1  MKRISTTITTTITITTGNGAG 21



>UniRef100_C8TGD2 Thr operon leader peptide n=1 Tax=Escherichia
          coli O26:H11 str. 11368 RepID=C8TGD2_ECO26
          Length = 21

 Score = 42.0 bits (97), Expect = 0.017
 Identities = 20/21 (95%), Positives = 20/21 (95%)

Query: 1  MKRISTTITTTITITTGNGAG 21
          MKRISTTI TTITITTGNGAG
Sbjct: 1  MKRISTTIITTITITTGNGAG 21



>UniRef100_D2TGH6 Thr operon leader peptide (Thr operon
          attenuator) n=1 Tax=Citrobacter rodentium ICC168
          RepID=D2TGH6_CITRO
          Length = 21

 Score = 40.0 bits (92), Expect = 0.064
 Identities = 19/21 (90%), Positives = 19/21 (90%)

Query: 1  MKRISTTITTTITITTGNGAG 21
          MKRISTTI TT TITTGNGAG
Sbjct: 1  MKRISTTIITTTTITTGNGAG 21




  Database: uniref100
    Posted date:  Mar 14, 2010  3:43 AM
  Number of letters in database: 997,485,377
  Number of sequences in database:  2,513,869
  
  Database: /data/DB/uniref100.01
    Posted date:  Mar 14, 2010  3:49 AM
  Number of letters in database: 996,838,839
  Number of sequences in database:  3,161,040
  
  Database: /data/DB/uniref100.02
    Posted date:  Mar 14, 2010  3:55 AM
  Number of letters in database: 996,933,278
  Number of sequences in database:  3,066,433
  
  Database: /data/DB/uniref100.03
    Posted date:  Mar 14, 2010  3:58 AM
  Number of letters in database: 474,847,963
  Number of sequences in database:  1,124,326
  
Lambda     K      H
   0.311    0.123    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,709,670
Number of Sequences: 9865668
Number of extensions: 1242413
Number of successful extensions: 5061
Number of sequences better than 1.0e-01: 3
Number of HSP's better than  0.1 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5058
Number of HSP's gapped (non-prelim): 3
length of query: 21
length of database: 3,466,105,457
effective HSP length: 0
effective length of query: 21
effective length of database: 3,466,105,457
effective search space: 72788214597
effective search space used: 72788214597
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 91 (39.7 bits)