Blast performed on August-31-2010
BLASTP 2.2.13 [Nov-27-2005]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Database: uniref100
10,711,464 sequences; 3,761,183,004 total letters
Query= EG11277 thrL
(21 letters)
Database: uniref100
Posted date: Aug 29, 2010 7:14 AM
Number of letters in database: 997,490,689
Number of sequences in database: 2,508,719
Database: /data/DB/uniref100.01
Posted date: Aug 29, 2010 9:06 AM
Number of letters in database: 996,867,838
Number of sequences in database: 3,129,927
Database: /data/DB/uniref100.02
Posted date: Aug 29, 2010 10:13 AM
Number of letters in database: 996,936,024
Number of sequences in database: 3,063,842
Database: /data/DB/uniref100.03
Posted date: Aug 29, 2010 11:06 AM
Number of letters in database: 769,888,453
Number of sequences in database: 2,008,976
Lambda K H
0.311 0.123 0.322
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,001,675
Number of Sequences: 10711464
Number of extensions: 1352681
Number of successful extensions: 5359
Number of sequences better than 1.0e-01: 3
Number of HSP's better than 0.1 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5356
Number of HSP's gapped (non-prelim): 3
length of query: 21
length of database: 3,761,183,004
effective HSP length: 0
effective length of query: 21
effective length of database: 3,761,183,004
effective search space: 78984843084
effective search space used: 78984843084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 91 (39.7 bits)