Score E
Sequences producing significant alignments: (bits) Value
ref|NP_414602.1| DNA polymerase II [Escherichia coli K12] >... 1614 0.0
pdb|1Q8I|A Chain A, Crystal Structure Of Escherichia Coli D... 1613 0.0
ref|ZP_00704349.1| COG0417: DNA polymerase elongation subun... 1613 0.0
ref|ZP_00695826.1| COG0417: DNA polymerase elongation subun... 1612 0.0
ref|ZP_00715669.1| COG0417: DNA polymerase elongation subun... 1611 0.0
ref|YP_406611.1| DNA polymerase II [Shigella boydii Sb227] ... 1611 0.0
ref|YP_309096.1| DNA polymerase II [Shigella sonnei Ss046] ... 1611 0.0
ref|ZP_00702429.1| COG0417: DNA polymerase elongation subun... 1609 0.0
ref|ZP_00727779.1| COG0417: DNA polymerase elongation subun... 1608 0.0
ref|ZP_00923866.1| COG0417: DNA polymerase elongation subun... 1607 0.0
gb|AAA63764.1| DNA polymerase II 1607 0.0
ref|ZP_00709650.1| COG0417: DNA polymerase elongation subun... 1605 0.0
ref|YP_687644.1| DNA polymerase II [Shigella flexneri 5 str... 1603 0.0
ref|NP_706014.1| DNA polymerase II [Shigella flexneri 2a st... 1603 0.0
ref|NP_285756.1| DNA polymerase II [Escherichia coli O157:H... 1600 0.0
ref|ZP_00734354.1| COG0417: DNA polymerase elongation subun... 1594 0.0
ref|YP_851261.1| DNA polymerase II [Escherichia coli APEC O... 1590 0.0
ref|ZP_00721002.1| COG0417: DNA polymerase elongation subun... 1589 0.0
ref|NP_752023.1| DNA polymerase II [Escherichia coli CFT073... 1586 0.0
ref|YP_539106.1| DNA polymerase II [Escherichia coli UTI89]... 1585 0.0
gb|AAA24406.1| DNA polymerase II >gi|147320|gb|AAA24407.1| ... 1520 0.0
ref|YP_149443.1| DNA polymerase II [Salmonella enterica sub... 1471 0.0
ref|NP_459102.1| DNA polymerase II [Salmonella typhimurium ... 1470 0.0
ref|NP_454709.1| DNA polymerase II [Salmonella enterica sub... 1469 0.0
ref|YP_215079.1| DNA polymerase II [Salmonella enterica sub... 1465 0.0
ref|ZP_01591264.1| DNA polymerase B, exonuclease [Enterobac... 1388 0.0
ref|ZP_00831663.1| COG0417: DNA polymerase elongation subun... 1172 0.0
ref|ZP_00823781.1| COG0417: DNA polymerase elongation subun... 1170 0.0
ref|YP_051940.1| DNA polymerase II [Erwinia carotovora subs... 1169 0.0
ref|ZP_01497924.1| hypothetical protein YpseI_02003097 [Yer... 1167 0.0
ref|YP_069201.1| DNA polymerase II [Yersinia pseudotubercul... 1166 0.0
ref|NP_404162.1| DNA polymerase II [Yersinia pestis CO92] >... 1165 0.0
ref|ZP_00825741.1| COG0417: DNA polymerase elongation subun... 1165 0.0
ref|YP_001004989.1| DNA polymerase II [Yersinia enterocolit... 1161 0.0
ref|ZP_01536922.1| DNA polymerase B, exonuclease [Serratia ... 1144 0.0
ref|ZP_01508998.1| DNA polymerase B, exonuclease [Burkholde... 1123 0.0
ref|ZP_01296195.1| hypothetical protein PaerP_01001956 [Pse... 1118 0.0
ref|YP_554375.1| DNA polymerase II [Burkholderia xenovorans... 1117 0.0
ref|ZP_00969710.1| COG0417: DNA polymerase elongation subun... 1115 0.0
ref|ZP_00975739.1| COG0417: DNA polymerase elongation subun... 1113 0.0
ref|NP_250577.1| DNA polymerase II [Pseudomonas aeruginosa ... 1111 0.0
ref|YP_791353.1| DNA polymerase II [Pseudomonas aeruginosa ... 1110 0.0
ref|YP_259587.1| DNA polymerase II [Pseudomonas fluorescens... 1105 0.0
ref|YP_274692.1| DNA polymerase II [Pseudomonas syringae pv... 1093 0.0
ref|YP_583797.1| DNA polymerase B, exonuclease [Ralstonia m... 1092 0.0
ref|NP_792430.1| DNA polymerase II [Pseudomonas syringae pv... 1088 0.0
ref|YP_235438.1| DNA polymerase II [Pseudomonas syringae pv... 1086 0.0
ref|YP_349463.1| DNA polymerase II [Pseudomonas fluorescens... 1085 0.0
ref|YP_726151.1| DNA polymerase II [Ralstonia eutropha H16]... 1085 0.0
ref|YP_298778.1| DNA-directed DNA polymerase B [Ralstonia e... 1082 0.0
ref|YP_608907.1| DNA polymerase II and 3'-> 5' exonuclease ... 1082 0.0
ref|ZP_01505446.1| DNA polymerase B region [Burkholderia ph... 1077 0.0
ref|ZP_01524745.1| DNA polymerase B region [Pseudomonas men... 1067 0.0
ref|NP_744541.1| DNA polymerase II [Pseudomonas putida KT24... 1067 0.0
ref|ZP_00897810.1| DNA-directed DNA polymerase B [Pseudomon... 1066 0.0
ref|ZP_01639523.1| DNA polymerase B region [Pseudomonas put... 1064 0.0
ref|ZP_01563692.1| DNA polymerase B region [Burkholderia ce... 1061 0.0
ref|ZP_00978320.1| COG0417: DNA polymerase elongation subun... 1059 0.0
ref|YP_624860.1| DNA polymerase B region [Burkholderia ceno... 1055 0.0
ref|ZP_01568337.1| DNA polymerase B region [Burkholderia mu... 1053 0.0
ref|ZP_00422403.1| DNA polymerase B, exonuclease:DNA polyme... 1050 0.0
gb|EAH89442.1| unknown [environmental sequence] 1048 0.0
ref|YP_373756.1| DNA polymerase B [Burkholderia sp. 383] >g... 1046 0.0
ref|ZP_01555899.1| DNA polymerase B region [Burkholderia am... 1046 0.0
ref|YP_776967.1| DNA polymerase B region [Burkholderia cepa... 1046 0.0
gb|AAG43149.1|AF063187_1 DNA polymerase II [Pseudomonas flu... 1000 0.0
gb|AAA23684.1| DNA polymerase II 945 0.0
ref|ZP_01521594.1| DNA polymerase B region [Comamonas testo... 887 0.0
ref|NP_761852.1| DNA polymerase II [Vibrio vulnificus CMCP6... 811 0.0
ref|NP_934025.1| DNA polymerase II [Vibrio vulnificus YJ016... 807 0.0
gb|EAY32799.1| DNA polymerase II [Vibrio cholerae 1587] 804 0.0
ref|NP_230857.1| DNA polymerase II [Vibrio cholerae O1 biov... 803 0.0
ref|NP_798325.1| DNA polymerase II [Vibrio parahaemolyticus... 800 0.0
gb|EAY39695.1| DNA polymerase II [Vibrio cholerae MZO-3] 798 0.0
ref|ZP_00756048.1| COG0417: DNA polymerase elongation subun... 798 0.0
ref|ZP_01481657.1| hypothetical protein VchoR_02002443 [Vib... 798 0.0
ref|ZP_01234586.1| DNA polymerase II [Vibrio angustum S14] ... 796 0.0
ref|ZP_01160150.1| DNA polymerase II [Photobacterium sp. SK... 796 0.0
ref|ZP_01067097.1| DNA polymerase II [Vibrio sp. MED222] >g... 778 0.0
ref|ZP_00992952.1| DNA polymerase II [Vibrio splendidus 12B... 775 0.0
ref|ZP_01218538.1| DNA polymerase II [Photobacterium profun... 773 0.0
ref|YP_129744.1| DNA polymerase II [Photobacterium profundu... 768 0.0
ref|YP_856637.1| DNA polymerase II [Aeromonas hydrophila su... 761 0.0
ref|YP_205011.1| DNA polymerase II [Vibrio fischeri ES114] ... 758 0.0
ref|YP_432839.1| DNA polymerase II [Hahella chejuensis KCTC... 743 0.0
ref|YP_526985.1| DNA polymerase elongation subunit [Sacchar... 743 0.0
ref|ZP_00832123.1| COG0417: DNA polymerase elongation subun... 729 0.0
gb|EAI79277.1| unknown [environmental sequence] 728 0.0
ref|YP_663186.1| DNA polymerase B region [Pseudoalteromonas... 723 0.0
ref|ZP_01615425.1| DNA polymerase II [marine gamma proteoba... 710 0.0
ref|YP_943233.1| DNA polymerase B region [Psychromonas ingr... 706 0.0
ref|ZP_01167632.1| DNA polymerase II [Oceanospirillum sp. M... 676 0.0
gb|AAL91993.1|AF483915_1 DNA polymerase [Escherichia coli] ... 668 0.0
gb|AAL92006.1|AF483928_1 DNA polymerase [Escherichia coli] 667 0.0
gb|AAP50170.1| polymerase [Escherichia coli] 667 0.0
gb|AAP50191.1| polymerase [Escherichia coli] 667 0.0
gb|AAL91998.1|AF483920_1 DNA polymerase [Escherichia coli] ... 667 0.0
gb|AAL91995.1|AF483917_1 DNA polymerase [Escherichia coli] 667 0.0
gb|AAP50175.1| polymerase [Escherichia coli] 666 0.0
gb|AAP50213.1| polymerase [Escherichia coli] 666 0.0
gb|AAP50201.1| polymerase [Escherichia coli] 666 0.0
gb|AAP50221.1| polymerase [Escherichia coli] 665 0.0
gb|AAL91992.1|AF483914_1 DNA polymerase [Escherichia coli] 665 0.0
gb|AAP50209.1| polymerase [Escherichia coli] 665 0.0
gb|AAP50171.1| polymerase [Escherichia coli] >gi|37954014|g... 665 0.0
gb|AAP50206.1| polymerase [Escherichia coli] 665 0.0
gb|AAL92005.1|AF483927_1 DNA polymerase [Escherichia coli] 665 0.0
gb|AAL92015.1|AF483937_1 DNA polymerase [Escherichia coli] ... 665 0.0
gb|AAL92000.1|AF483922_1 DNA polymerase [Escherichia coli] ... 665 0.0
gb|AAS11688.1| SOS inducible DNA polymerase [Escherichia coli] 665 0.0
gb|AAP50179.1| polymerase [Escherichia coli] 665 0.0
gb|AAP50222.1| polymerase [Escherichia coli] 664 0.0
gb|AAL92009.1|AF483931_1 DNA polymerase [Escherichia coli] 664 0.0
gb|AAL91999.1|AF483921_1 DNA polymerase [Escherichia coli] 664 0.0
gb|AAL92012.1|AF483934_1 DNA polymerase [Escherichia coli] ... 664 0.0
gb|AAP50172.1| polymerase [Escherichia coli] 664 0.0
gb|AAL92011.1|AF483933_1 DNA polymerase [Escherichia coli] 664 0.0
gb|AAP50169.1| polymerase [Escherichia coli] 663 0.0
gb|AAP50212.1| polymerase [Escherichia coli] 663 0.0
gb|AAP50195.1| polymerase [Escherichia coli] 663 0.0
gb|AAP50187.1| polymerase [Escherichia coli] 662 0.0
gb|AAP50178.1| polymerase [Escherichia coli] 662 0.0
gb|AAS11692.1| SOS inducible DNA polymerase [Shigella sonnei] 660 0.0
ref|ZP_01132534.1| DNA polymerase II [Pseudoalteromonas tun... 660 0.0
gb|AAP50183.1| polymerase [Escherichia coli] 659 0.0
ref|ZP_01217006.1| DNA polymerase II [Psychromonas sp. CNPT... 659 0.0
gb|AAP50211.1| polymerase [Escherichia coli] 657 0.0
gb|AAP50184.1| polymerase [Escherichia coli] 657 0.0
ref|ZP_01604198.1| DNA polymerase B region [Shewanella peal... 651 0.0
gb|AAP50210.1| polymerase [Escherichia coli] 650 0.0
gb|EAK47024.1| unknown [environmental sequence] 649 0.0
ref|YP_927127.1| DNA polymerase II [Shewanella amazonensis ... 645 0.0
gb|EAK47023.1| unknown [environmental sequence] 644 0.0
ref|ZP_01114466.1| DNA-directed DNA polymerase B [Reinekea ... 639 0.0
ref|YP_268993.1| DNA polymerase II [Colwellia psychrerythra... 635 e-180
ref|ZP_01307445.1| DNA polymerase II [Oceanobacter sp. RED6... 615 e-174
ref|ZP_01109042.1| DNA polymerase II [Alteromonas macleodii... 613 e-174
ref|YP_734597.1| DNA polymerase B region [Shewanella sp. MR... 608 e-172
ref|YP_738579.1| DNA polymerase B region [Shewanella sp. MR... 608 e-172
ref|NP_717428.1| DNA polymerase II [Shewanella oneidensis M... 604 e-171
gb|EAY52067.1| DNA polymerase B region [Shewanella putrefac... 603 e-170
ref|YP_963964.1| DNA polymerase B region [Shewanella sp. W3... 602 e-170
ref|ZP_00815422.1| DNA polymerase B, exonuclease:DNA polyme... 602 e-170
ref|ZP_00583381.1| DNA polymerase B, exonuclease:DNA polyme... 601 e-170
ref|ZP_01543046.1| DNA polymerase B region [Shewanella wood... 600 e-169
ref|ZP_01435945.1| DNA polymerase B region [Shewanella balt... 598 e-169
gb|EAK55813.1| unknown [environmental sequence] 597 e-168
ref|YP_870262.1| DNA polymerase B region [Shewanella sp. AN... 595 e-168
ref|YP_340489.1| DNA polymerase II [Pseudoalteromonas halop... 594 e-168
gb|EAJ57406.1| unknown [environmental sequence] 593 e-167
gb|AAL92017.1|AF483939_1 DNA polymerase [Escherichia coli] 592 e-167
ref|YP_751308.1| DNA polymerase B region [Shewanella frigid... 588 e-166
gb|AAP50188.1| polymerase [Escherichia coli] 588 e-166
ref|ZP_00838669.1| DNA polymerase B, exonuclease:DNA polyme... 580 e-163
ref|ZP_01484224.1| hypothetical protein VchoV5_02003205 [Vi... 577 e-162
gb|AAS11689.1| SOS inducible DNA polymerase [Escherichia coli] 569 e-160
ref|YP_563431.1| DNA polymerase B region [Shewanella denitr... 565 e-159
gb|AAL91991.1|AF483913_1 DNA polymerase [Escherichia coli] 564 e-159
gb|AAL92003.1|AF483925_1 DNA polymerase [Escherichia coli] 550 e-154
ref|ZP_01596042.1| DNA polymerase B region [Marinomonas sp.... 533 e-149
ref|ZP_01075839.1| DNA polymerase II [Marinomonas sp. MED12... 509 e-142
gb|AAP50173.1| polymerase [Escherichia coli] 494 e-138
gb|EAK78603.1| unknown [environmental sequence] 442 e-122
gb|EAG76673.1| unknown [environmental sequence] 427 e-117
gb|ABC97707.1| PolB [Shigella dysenteriae] >gi|86516125|gb|... 418 e-115
gb|ABC97721.1| PolB [Shigella boydii] >gi|86516149|gb|ABC97... 416 e-114
gb|ABC97719.1| PolB [Shigella flexneri] >gi|86516167|gb|ABC... 416 e-114
gb|ABC97704.1| PolB [Shigella dysenteriae] >gi|86516109|gb|... 416 e-114
gb|AAP50200.1| polymerase [Escherichia coli] 416 e-114
gb|ABC97715.1| PolB [Shigella flexneri] 416 e-114
gb|ABC97710.1| PolB [Shigella dysenteriae] 415 e-114
gb|ABC97743.1| PolB [Escherichia coli] >gi|86516187|gb|ABC9... 414 e-113
gb|ABC97729.1| PolB [Shigella boydii] 414 e-113
gb|AAS11687.1| SOS inducible DNA polymerase [Escherichia coli] 414 e-113
gb|ABC97740.1| PolB [Shigella dysenteriae] 413 e-113
gb|ABC97711.1| PolB [Shigella dysenteriae] 412 e-113
ref|ZP_00832122.1| COG0417: DNA polymerase elongation subun... 409 e-112
gb|AAL92010.1|AF483932_1 DNA polymerase [Escherichia coli] 407 e-111
gb|AAL91990.1|AF483912_1 DNA polymerase [Escherichia coli] 404 e-110
gb|EAG84507.1| unknown [environmental sequence] 395 e-108
gb|EAI12136.1| unknown [environmental sequence] 389 e-106
gb|EAJ75235.1| unknown [environmental sequence] 366 3e-99
ref|ZP_01262924.1| DNA polymerase II [Vibrio alginolyticus ... 364 1e-98
ref|YP_998903.1| DNA polymerase II [Verminephrobacter eisen... 333 2e-89
gb|EAH61999.1| unknown [environmental sequence] 274 1e-71
ref|ZP_01614940.1| DNA polymerase II [Alteromonadales bacte... 248 1e-63
gb|EAI45646.1| unknown [environmental sequence] 235 7e-60
ref|ZP_01613638.1| DNA polymerase II [Alteromonadales bacte... 219 5e-55
gb|AAZ32459.1| DNA polymerase family B [uncultured euryarch... 201 1e-49
emb|CAA90888.1| DNA-dependent DNA polymerase [Pyrococcus ab... 196 5e-48
ref|NP_127396.1| DNA polymerase I [Pyrococcus abyssi GE5] >... 193 4e-47
emb|CAA90887.1| DNA-dependent DNA polymerase; endonuclease ... 191 2e-46
emb|CAC12847.1| DNA polymerase [Pyrococcus sp. ST700] 187 2e-45
ref|NP_111342.1| DNA polymerase II [Thermoplasma volcanium ... 184 2e-44
dbj|BAB59979.1| DNA polymerase [Thermoplasma volcanium GSS1] 184 2e-44
emb|CAA60631.1| DNA polymerase alpha [Physarum polycephalum] 181 2e-43
emb|CAB81809.1| DNA polymerase [Pyrococcus glycovorans] 180 3e-43
gb|AAA67131.1| DNA polymerase 179 8e-43
emb|CAC12849.1| DNA polymerase [Pyrococcus glycovorans] 178 1e-42
ref|NP_559770.1| DNA polymerase II [Pyrobaculum aerophilum ... 175 9e-42
ref|NP_577941.1| DNA-directed DNA polymerase [Pyrococcus fu... 175 9e-42
ref|NP_394366.1| DNA polymerase II [Thermoplasma acidophilu... 174 2e-41
ref|YP_930480.1| DNA polymerase Pol2 [Pyrobaculum islandicu... 172 7e-41
pdb|1WNS|A Chain A, Crystal Structure Of Family B Dna Polym... 167 2e-39
ref|NP_378066.1| DNA polymerase II [Sulfolobus tokodaii str... 167 3e-39
pdb|1QQC|A Chain A, Crystal Structure Of An Archaebacterial... 167 3e-39
ref|ZP_00609020.1| DNA polymerase B, exonuclease domain:DNA... 166 5e-39
pdb|1WN7|A Chain A, Crystal Structure Of Archaeal Family B ... 164 2e-38
dbj|BAA93703.1| DNA polymerase B3 [Sulfurisphaera ohwakuensis] 164 3e-38
sp|Q56366|DPOL_THES9 DNA polymerase >gi|1197452|gb|AAA88769... 164 3e-38
sp|P56689|DPOL_THEGO DNA polymerase (TO POL) >gi|4699806|pd... 163 3e-38
ref|YP_022906.1| DNA polymerase II [Picrophilus torridus DS... 163 4e-38
gb|EAG05935.1| unknown [environmental sequence] 161 2e-37
ref|NP_069333.1| DNA polymerase B1 (polB) [Archaeoglobus fu... 160 2e-37
ref|YP_998904.1| DNA polymerase II [Verminephrobacter eisen... 159 8e-37
ref|YP_001030057.1| hypothetical protein Mlab_0616 [Methano... 158 1e-36
ref|YP_919805.1| DNA polymerase Pol2 [Thermofilum pendens H... 158 1e-36
pdb|1QHT|A Chain A, Dna Polymerase From Thermococcus Sp. 9o... 158 1e-36
sp|O48901|DPOD1_SOYBN DNA polymerase delta catalytic subuni... 158 1e-36
gb|EAG14024.1| unknown [environmental sequence] 157 2e-36
ref|YP_843812.1| DNA polymerase Pol2 [Methanosaeta thermoph... 157 3e-36
gb|AAA72101.1| DNA dependent DNA polymerase 156 5e-36
ref|YP_305298.1| DNA-directed DNA polymerase [Methanosarcin... 154 2e-35
gb|AAX97697.1| DNA polymerase [Sulfophobococcus zilligii] 154 2e-35
ref|NP_001067405.1| Os11g0186400 [Oryza sativa (japonica cu... 153 3e-35
pdb|1D5A|A Chain A, Crystal Structure Of An Archaebacterial... 152 8e-35
gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic ... 152 1e-34
ref|NP_201201.1| 3'-5' exonuclease/ DNA binding / DNA-direc... 152 1e-34
ref|YP_566332.1| DNA polymerase (pol2) [Methanococcoides bu... 151 2e-34
ref|ZP_01601577.1| DNA polymerase Pol2 [Metallosphaera sedu... 150 2e-34
gb|EAI07656.1| unknown [environmental sequence] 150 4e-34
ref|ZP_01392411.1| DNA polymerase B, exonuclease:DNA polyme... 149 7e-34
ref|XP_955596.1| DNA polymerase delta catalytic subunit [En... 149 9e-34
emb|CAJ35163.1| DNA-directed DNA polymerase B [uncultured m... 147 3e-33
ref|NP_279569.1| DNA polymerase B1 [Halobacterium sp. NRC-1... 147 3e-33
ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoform... 146 6e-33
gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus ... 146 6e-33
ref|NP_634028.1| DNA polymerase delta catalytic subunit [Me... 145 7e-33
ref|NP_614322.1| B family DNA polymerase [Methanopyrus kand... 144 2e-32
ref|XP_001211449.1| DNA polymerase delta catalytic subunit ... 143 5e-32
ref|NP_615844.1| DNA-directed DNA polymerase [Methanosarcin... 142 8e-32
gb|EAY50434.1| DNA polymerase Pol2 [Methanococcus vannielii... 141 1e-31
ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus... 141 1e-31
ref|XP_687096.1| PREDICTED: polymerase (DNA directed), alph... 140 2e-31
ref|NP_148383.2| family B DNA polymerase II [Aeropyrum pern... 140 4e-31
ref|YP_502623.1| DNA polymerase B region [Methanospirillum ... 140 4e-31
sp|O93746|DPOL2_AERPE DNA polymerase 2 (DNA polymerase II) 140 4e-31
emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic ... 139 5e-31
ref|ZP_01655396.1| DNA polymerase family B [Methanococcus m... 139 7e-31
gb|EAK63344.1| unknown [environmental sequence] 139 9e-31
ref|NP_987500.1| DNA polymerase family B [Methanococcus mar... 139 9e-31
dbj|BAA75663.1| DNA polymerase II [Aeropyrum pernix] 139 9e-31
dbj|BAD92010.1| DNA polymerase alpha catalytic subunit [Cai... 138 1e-30
dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyr... 138 1e-30
dbj|BAA07580.1| DNA polymerase [Pyrodictium occultum] 138 2e-30
gb|AAA35303.1| DNA polymerase delta 137 2e-30
ref|NP_596124.1| hypothetical protein SPBC336.04 [Schizosac... 137 2e-30
ref|XP_321134.3| ENSANGP00000018383 [Anopheles gambiae str.... 137 3e-30
ref|YP_001013090.1| DNA polymerase III [Hyperthermus butyli... 137 3e-30
gb|AAT68051.1| DNA polymerase alpha [Danio rerio] 137 3e-30
dbj|BAC76767.1| DNA polymerase alpha catalytic subunit [Cop... 137 3e-30
ref|XP_416792.2| PREDICTED: similar to DNA polymerase alpha... 136 4e-30
dbj|BAD92011.1| DNA polymerase alpha catalytic subunit [Gal... 136 4e-30
ref|NP_776852.1| polymerase (DNA directed), delta 1, cataly... 136 4e-30
ref|XP_001116065.1| PREDICTED: polymerase (DNA directed), d... 136 6e-30
ref|XP_001240726.1| hypothetical protein CIMG_07889 [Coccid... 135 7e-30
dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae] 135 7e-30
ref|NP_067694.1| polymerase (DNA directed), delta 1, cataly... 135 7e-30
dbj|BAD92009.1| DNA polymerase alpha catalytic subunit [Igu... 135 1e-29
emb|CAA29920.1| unnamed protein product [Homo sapiens] 135 1e-29
ref|NP_058633.2| polymerase (DNA-directed), alpha [Homo sap... 135 1e-29
ref|XP_001275367.1| DNA polymerase alpha catalytic subunit,... 134 2e-29
ref|NP_700639.1| DNA polymerase delta catalytic subunit [Pl... 134 2e-29
ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago m... 134 2e-29
ref|NP_499437.2| Y47D3A.29 [Caenorhabditis elegans] >gi|250... 134 2e-29
gb|EAH18799.1| unknown [environmental sequence] 134 3e-29
dbj|BAD92008.1| DNA polymerase alpha catalytic subunit [Tra... 134 3e-29
ref|YP_254794.1| DNA polymerase II [Sulfolobus acidocaldari... 134 3e-29
emb|CAE75373.1| Hypothetical protein CBG23360 [Caenorhabdit... 134 3e-29
ref|NP_506017.1| F10C2.4 [Caenorhabditis elegans] >gi|13124... 133 4e-29
ref|XP_961558.1| hypothetical protein [Neurospora crassa OR... 133 4e-29
ref|XP_614762.3| PREDICTED: similar to polymerase (DNA dire... 132 6e-29
ref|XP_001116048.1| PREDICTED: polymerase (DNA directed), d... 132 6e-29
gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalyti... 132 6e-29
sp|P28340|DPOD1_HUMAN DNA polymerase delta catalytic subuni... 132 6e-29
ref|XP_001261127.1| DNA polymerase delta large chain [Neosa... 132 8e-29
ref|XP_967510.1| PREDICTED: similar to CG6349-PA [Tribolium... 132 8e-29
ref|NP_536736.2| DNA polymerase alpha 180kD CG6349-PA [Dros... 132 8e-29
ref|XP_387351.1| conserved hypothetical protein [Gibberella... 132 8e-29
ref|XP_729844.1| DNA polymerase delta catalytic subunit [Pl... 132 8e-29
ref|XP_001091195.1| PREDICTED: polymerase (DNA-directed), a... 132 1e-28
dbj|BAC40275.1| unnamed protein product [Mus musculus] 132 1e-28
ref|XP_001275938.1| DNA polymerase delta large chain [Asper... 131 1e-28
ref|XP_001208868.1| hypothetical protein ATEG_01503 [Asperg... 131 1e-28
emb|CAJ38096.1| DNA-directed DNA polymerase B [uncultured m... 131 1e-28
gb|AAP50186.1| polymerase [Escherichia coli] 131 1e-28
emb|CAE67630.1| Hypothetical protein CBG13184 [Caenorhabdit... 131 1e-28
dbj|BAE40829.1| unnamed protein product [Mus musculus] >gi|... 131 1e-28
ref|XP_755997.1| DNA polymerase delta large chain [Aspergil... 131 1e-28
ref|NP_002682.1| polymerase (DNA directed), delta 1, cataly... 131 2e-28
ref|NP_035261.2| polymerase (DNA directed), delta 1, cataly... 131 2e-28
emb|CAG02717.1| unnamed protein product [Tetraodon nigrovir... 131 2e-28
sp|P52431|DPOD1_MOUSE DNA polymerase delta catalytic subuni... 131 2e-28
dbj|BAD92797.1| polymerase (DNA directed), delta 1, catalyt... 130 2e-28
ref|XP_362488.1| hypothetical protein MG08071.4 [Magnaporth... 130 2e-28
ref|XP_001260549.1| DNA polymerase alpha catalytic subunit,... 130 3e-28
gb|EAU90154.1| hypothetical protein CC1G_05692 [Coprinopsis... 130 3e-28
ref|XP_537985.2| PREDICTED: similar to DNA polymerase alpha... 130 3e-28
gb|AAA35768.1| DNA polymerase delta 130 4e-28
ref|NP_001039204.1| polymerase (DNA directed), delta 1, cat... 130 4e-28
sp|P97283|DPOD1_MESAU DNA polymerase delta catalytic subuni... 130 4e-28
gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus ... 129 5e-28
sp|P52025|DPOL_METVO DNA polymerase >gi|495654|gb|AAA72443.... 129 5e-28
ref|XP_001064735.1| PREDICTED: similar to DNA polymerase al... 129 7e-28
ref|XP_001239851.1| hypothetical protein CIMG_09472 [Coccid... 129 7e-28
dbj|BAD92007.1| DNA polymerase alpha catalytic subunit [Amb... 129 7e-28
ref|NP_032918.1| polymerase (DNA directed), alpha 1 [Mus mu... 129 7e-28
ref|XP_755406.1| DNA polymerase alpha catalytic subunit [As... 129 7e-28
sp|O89042|DPOLA_RAT DNA polymerase alpha catalytic subunit ... 129 9e-28
ref|XP_001225371.1| conserved hypothetical protein [Chaetom... 128 1e-27
gb|EAG61699.1| unknown [environmental sequence] 128 2e-27
gb|EAL28710.1| GA19530-PA [Drosophila pseudoobscura] 128 2e-27
ref|XP_863454.1| PREDICTED: similar to DNA polymerase delta... 127 2e-27
ref|XP_851285.1| PREDICTED: similar to DNA polymerase delta... 127 2e-27
emb|CAA41968.1| catalytic subunit DNA polymerase delta [Sch... 127 3e-27
ref|XP_001032353.1| DNA polymerase family B containing prot... 127 3e-27
gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus] 127 3e-27
gb|EAT84659.1| hypothetical protein SNOG_08383 [Phaeosphaer... 126 5e-27
gb|EAT39994.1| DNA polymerase alpha catalytic subunit [Aede... 126 5e-27
ref|XP_951513.1| DNA polymerase delta catalytic subunit [Tr... 126 5e-27
ref|YP_919711.1| DNA polymerase B region [Thermofilum pende... 126 6e-27
gb|AAH81093.1| Pold protein [Xenopus laevis] 125 1e-26
ref|XP_001121438.1| PREDICTED: similar to DNA polymerase al... 124 2e-26
gb|AAB24152.1| DNA polymerase-primase 180 kda subunit [Dros... 124 2e-26
ref|XP_808567.1| DNA polymerase delta catalytic subunit [Tr... 124 2e-26
emb|CAA61282.1| DNA-directed DNA polymerase III [Candida al... 124 2e-26
ref|XP_499875.1| hypothetical protein [Yarrowia lipolytica]... 124 2e-26
pir||JC5757 DNA-directed DNA polymerase (EC 2.7.7.7) III - ... 124 2e-26
ref|XP_638283.1| DNA polymerase delta catalytic subunit [Di... 124 2e-26
ref|XP_454020.1| unnamed protein product [Kluyveromyces lac... 124 3e-26
ref|XP_888889.1| hypothetical protein CaJ7.0319 [Candida al... 124 3e-26
sp|P46588|DPOD_CANAL DNA polymerase delta catalytic subunit... 124 3e-26
ref|XP_640277.1| DNA polymerase alpha catalytic subunit [Di... 124 3e-26
emb|CAJ06437.1| DNA polymerase delta catalytic subunit, put... 123 4e-26
ref|XP_760676.1| hypothetical protein UM04529.1 [Ustilago m... 123 4e-26
emb|CAA43922.1| DNA polymerase III catalytic subunit [Sacch... 123 5e-26
ref|NP_001034899.1| DNA polymerase delta1 catalytic subunit... 123 5e-26
ref|NP_010181.1| Catalytic subunit of DNA polymerase delta;... 123 5e-26
gb|AAI24084.1| Unknown (protein for MGC:152688) [Danio rerio] 122 7e-26
gb|EAT33548.1| DNA polymerase delta catalytic subunit [Aede... 122 7e-26
ref|XP_449097.1| unnamed protein product [Candida glabrata]... 122 9e-26
ref|XP_001221663.1| hypothetical protein CHGG_05568 [Chaeto... 122 1e-25
ref|XP_623795.1| PREDICTED: similar to DNA polymerase delta... 121 2e-25
ref|XP_663536.1| hypothetical protein AN5932.2 [Aspergillus... 121 2e-25
ref|XP_967290.1| PREDICTED: similar to DNA polymerase delta... 120 2e-25
gb|AAL48000.1| GM13460p [Drosophila melanogaster] 119 6e-25
emb|CAG38139.1| DNA polymerase B [Haloferax volcanii] 119 6e-25
dbj|BAE65042.1| unnamed protein product [Aspergillus oryzae] 119 7e-25
sp|Q9DE46|DPOLA_XENLA DNA polymerase alpha catalytic subuni... 119 7e-25
ref|XP_320778.2| ENSANGP00000014184 [Anopheles gambiae str.... 119 7e-25
gb|EAT82147.1| hypothetical protein SNOG_10753 [Phaeosphaer... 119 9e-25
ref|XP_963131.1| hypothetical protein [Neurospora crassa OR... 119 9e-25
gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens] 117 3e-24
ref|NP_985361.1| AFL189Wp [Ashbya gossypii ATCC 10895] >gi|... 117 3e-24
ref|NP_276336.1| DNA-dependent DNA polymerase family B (Pol... 117 4e-24
ref|XP_385597.1| hypothetical protein FG05421.1 [Gibberella... 117 4e-24
emb|CAA33504.1| unnamed protein product [Saccharomyces cere... 115 8e-24
ref|XP_001326973.1| polymerase zeta subunit, putative [Tric... 115 1e-23
dbj|BAA32745.1| DNA polymerase alpha 180K subunit [Drosophi... 115 1e-23
dbj|BAA14340.1| DNA polymerase alpha [Drosophila melanogaster] 115 1e-23
ref|NP_524099.2| DNA-polymerase-delta CG5949-PA [Drosophila... 115 1e-23
ref|NP_048532.1| PBVC-1 DNA polymerase [Paramecium bursaria... 115 1e-23
ref|XP_805939.1| DNA polymerase delta catalytic subunit [Tr... 114 2e-23
emb|CAK75833.1| unnamed protein product [Paramecium tetraur... 114 3e-23
ref|YP_001013449.1| DNA polymerase I [Hyperthermus butylicu... 113 4e-23
ref|XP_369882.1| hypothetical protein MG06397.4 [Magnaporth... 113 4e-23
emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster] 113 5e-23
dbj|BAA07579.1| DNA polymerase [Pyrodictium occultum] 113 5e-23
ref|XP_627772.1| DNA polymerase delta catalytic subunit. DN... 113 5e-23
ref|XP_766420.1| DNA polymerase delta catalytic subunit [Th... 112 9e-23
gb|AAC57976.2| DNA polymerase [retroperitoneal fibromatosis... 112 1e-22
dbj|BAA35142.1| DNA polymerase [Chlorella virus K2] 112 1e-22
gb|EAI54611.1| unknown [environmental sequence] 110 3e-22
emb|CAL54807.1| DNA-directed DNA polymerase alpha catalytic... 110 3e-22
ref|XP_503837.1| hypothetical protein [Yarrowia lipolytica]... 110 3e-22
gb|AAY23282.1| Similar to dna polymerase delta catalytic su... 110 3e-22
gb|AAF16520.1|AF191042_1 DNA polymerase [porcine lymphotrop... 109 6e-22
ref|XP_571383.1| DNA polymerase alpha catalytic subunit [C... 108 1e-21
gb|EAL20261.1| hypothetical protein CNBF0730 [Cryptococcus ... 108 1e-21
dbj|BAE95222.1| DNA-directed DNA polymerase B [uncultured c... 108 2e-21
ref|NP_597442.1| DNA-DIRECTED DNA POLYMERASE ALPHA [Encepha... 108 2e-21
gb|EAL30522.1| GA19253-PA [Drosophila pseudoobscura] 108 2e-21
ref|XP_462512.1| hypothetical protein DEHA0G23650g [Debaryo... 107 3e-21
sp|P30320|DPOL_PBCVN DNA polymerase >gi|281076|pir||B42543 ... 107 3e-21
ref|XP_741713.1| DNA polymerase delta catalytic subunit [Pl... 107 4e-21
gb|EAK59129.1| unknown [environmental sequence] 106 5e-21
ref|ZP_01600325.1| DNA polymerase B region [Metallosphaera ... 106 6e-21
gb|AAO46909.1| DNA polymerase [Sus barbatus lymphotropic he... 105 8e-21
gb|AAO12301.1| DNA polymerase [Porcine lymphotropic herpesv... 105 1e-20
ref|YP_293784.1| putative DNA polymerase delta catalytic su... 105 1e-20
ref|YP_448519.1| putative DNA polymerase [Methanosphaera st... 104 2e-20
ref|XP_657373.1| DNA polymerase alpha catalytic subunit [En... 104 2e-20
gb|EAY21445.1| DNA polymerase family B containing protein [... 104 2e-20
ref|NP_001044920.1| Os01g0868300 [Oryza sativa (japonica cu... 104 2e-20
gb|AAO12282.1| DNA polymerase [Porcine lymphotropic herpesv... 104 2e-20
gb|AAF16522.1|AF191043_1 DNA-dependent DNA polymerase [porc... 104 2e-20
sp|O48653|DPOLA_ORYSA DNA polymerase alpha catalytic subunit 104 2e-20
ref|XP_953875.1| DNA polymerase delta catalytic subunit [Th... 103 3e-20
emb|CAB57881.1| DNA-directed DNA polymerase [Schizosaccharo... 103 4e-20
ref|NP_594186.1| hypothetical protein SPAC3H5.06c [Schizosa... 103 4e-20
gb|AAF81662.1|AF204166_2 DNA polymerase [retroperitoneal fi... 102 7e-20
ref|NP_143776.1| DNA-directed DNA polymerase [Pyrococcus ho... 102 7e-20
dbj|BAD81999.1| putative DNA polymerase alpha catalytic sub... 102 9e-20
ref|NP_377384.1| DNA polymerase II [Sulfolobus tokodaii str... 102 9e-20
pdb|1S5J|A Chain A, Insight In Dna Replication: The Crystal... 102 1e-19
emb|CAA45795.1| DNA-directed DNA polymerase [Sulfolobus sol... 102 1e-19
sp|O50607|DPOL1_SULOH DNA polymerase 1 (DNA polymerase I) (... 102 1e-19
gb|AAC26681.2| DNA polymerase catalytic subunit [Hawaiian g... 100 3e-19
gb|AAK00812.1| DNA polymerase [unidentified herpesvirus] 100 3e-19
ref|NP_963362.1| hypothetical protein NEQ068 [Nanoarchaeum ... 100 3e-19
gb|AAQ97671.1| DNA polymerase alpha [Paraurostyla weissei] 100 3e-19
ref|XP_654477.1| DNA polymerase delta catalytic subunit [En... 100 3e-19
ref|XP_767359.1| DNA polymerase alpha subunit [Giardia lamb... 100 3e-19
gb|AAG52947.1| type I DNA polymerase alpha [Urostyla grandis] 100 3e-19
gb|AAG52946.1| type II DNA polymerase alpha [Urostyla grandis] 100 3e-19
ref|XP_954899.1| DNA polymerase alpha, catalytic subunit [T... 100 3e-19
dbj|BAA75662.1| DNA polymerase [Aeropyrum pernix] 100 3e-19
gb|AAU84534.1| polymerase [Fibropapilloma-associated turtle... 100 5e-19
dbj|BAE63522.1| unnamed protein product [Aspergillus oryzae] 100 5e-19
gb|AAT11258.1| DNA polymerase alpha [Uroleptus sp. WJC-2003] 100 6e-19
ref|NP_342079.1| DNA polymerase II [Sulfolobus solfataricus... 100 6e-19
ref|YP_068007.1| BALF5 [Cercopithecine herpesvirus 15] >gi|... 99 8e-19
gb|AAZ22505.1| Pol1p [Saccharomyces cerevisiae] 99 8e-19
ref|NP_014297.1| Catalytic subunit of the DNA polymerase al... 99 8e-19
gb|ABK77804.1| DNA polymerase elongation subunit (family B)... 99 1e-18
gb|AAP45776.1| DNA polymerase catalytic subunit alpha [Styl... 99 1e-18
gb|AAC62689.1| archael family B DNA polymerase [Cenarchaeum... 99 1e-18
ref|YP_386125.1| DNA polymerase B, exonuclease [Geobacter m... 99 1e-18
gb|ABB89286.1| BALF5 [Human herpesvirus 4] 99 1e-18
gb|AAP45773.1| DNA polymerase catalytic subunit alpha [Styl... 99 1e-18
gb|AAP45774.1| DNA polymerase catalytic subunit alpha [Styl... 99 1e-18
gb|AAA34888.1| polymerase I 99 1e-18
gb|AAY41154.1| unknown [Human herpesvirus 4] 99 1e-18
gb|AAT11255.1| DNA polymerase alpha [Holosticha sp. WJC-2003] 98 2e-18
ref|YP_256144.1| DNA polymerase II [Sulfolobus acidocaldari... 98 2e-18
gb|AAP45775.1| DNA polymerase catalytic subunit alpha [Styl... 98 2e-18
gb|AAP45778.1| DNA polymerase catalytic subunit alpha [Styl... 98 2e-18
gb|AAC62712.1| archael family B DNA polymerase B [Cenarchae... 98 2e-18
gb|AAB94881.1| DNA polymerase [Cenarchaeum symbiosum] 98 2e-18
ref|YP_401712.1| BALF5 [Human herpesvirus 4] >gi|118858|sp|... 98 2e-18
gb|EAU90184.1| hypothetical protein CC1G_05722 [Coprinopsis... 97 3e-18
ref|XP_452791.1| unnamed protein product [Kluyveromyces lac... 97 3e-18
gb|AAP45772.1| DNA polymerase catalytic subunit alpha [Styl... 97 3e-18
ref|NP_559825.1| DNA polymerase II [Pyrobaculum aerophilum ... 97 4e-18
dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Ory... 97 4e-18
ref|XP_001217329.1| hypothetical protein ATEG_08743 [Asperg... 97 5e-18
gb|AAP45777.1| DNA polymerase catalytic subunit alpha [Styl... 97 5e-18
ref|NP_065512.1| DNA Polymerase [Alcelaphine herpesvirus 1]... 97 5e-18
ref|XP_001013747.1| DNA polymerase catalytic subunit [Tetra... 96 7e-18
emb|CAD91912.1| DNA polymerase B1 [Acidianus brierleyi] 96 7e-18
ref|NP_146963.1| family B DNA polymerase I [Aeropyrum perni... 96 7e-18
ref|NP_985237.1| AER381Cp [Ashbya gossypii ATCC 10895] >gi|... 96 9e-18
ref|NP_201511.1| 3'-5' exonuclease/ DNA binding / DNA-direc... 96 9e-18
ref|XP_626972.1| DNA polymerase alpha catalytic subunit [Cr... 96 9e-18
gb|EAK15573.1| unknown [environmental sequence] 96 1e-17
ref|NP_076501.1| DNA polymerase [Bovine herpesvirus 4] >gi|... 96 1e-17
emb|CAF97991.1| unnamed protein product [Tetraodon nigrovir... 96 1e-17
ref|XP_662393.1| hypothetical protein AN4789.2 [Aspergillus... 95 1e-17
ref|NP_042605.1| DNA polymerase replicative subunit [Equid ... 95 2e-17
gb|ABB22230.1| DNA polymerase-like protein [Ovine herpesvir... 94 2e-17
gb|AAU81560.1| polymerase [Fibropapilloma-associated turtle... 94 2e-17
ref|YP_438136.1| ORF9 [Ovine herpesvirus 2] >gi|61970963|gb... 94 2e-17
gb|AAO73537.1| DNA polymerase catalytic subunit alpha [Styl... 94 3e-17
gb|AAU81565.1| polymerase [Fibropapilloma-associated turtle... 94 4e-17
gb|AAC72338.1| DNA polymerase alpha; DNAP alpha [Giardia in... 94 4e-17
sp|Q51334|DPOL_PYRSD DNA polymerase (Deep vent DNA polymera... 94 4e-17
ref|XP_001263773.1| DNA polymerase zeta catalytic subunit, ... 93 6e-17
ref|XP_446650.1| unnamed protein product [Candida glabrata]... 93 6e-17
gb|AAF63493.2|AF239684_1 polymerase [Green turtle herpesvirus] 93 7e-17
ref|XP_818012.1| DNA polymerase I alpha catalytic subunit [... 93 7e-17
ref|XP_723089.1| putative DNA polymerase I alpha subunit p1... 93 7e-17
emb|CAJ04158.1| DNA polymerase I alpha catalytic subunit, p... 92 9e-17
ref|YP_182414.1| DNA-directed DNA polymerase, family B [The... 92 9e-17
dbj|BAA06142.2| DNA-dependent DNA polymerase [Pyrococcus sp.] 92 9e-17
ref|XP_754928.1| DNA polymerase zeta catalytic subunit [Asp... 92 9e-17
ref|XP_001246628.1| hypothetical protein CIMG_00399 [Coccid... 92 1e-16
ref|XP_847318.1| DNA polymerase alpha catalytic subunit [Tr... 92 1e-16
pir||S71551 DNA-directed DNA polymerase (EC 2.7.7.7) KOD, i... 92 1e-16
sp|P27727|DPOLA_TRYBB DNA polymerase alpha catalytic subuni... 92 1e-16
gb|AAU81562.1| polymerase [Fibropapilloma-associated turtle... 92 2e-16
sp|O00874|DPOLA_LEIDO DNA polymerase alpha catalytic subuni... 92 2e-16
ref|XP_763220.1| DNA polymerase alpha [Theileria parva stra... 92 2e-16
ref|YP_930335.1| DNA polymerase B region [Pyrobaculum islan... 91 2e-16
gb|ABD14869.1| PolA precursor [Thermococcus sp. GT] 91 2e-16
ref|XP_001270698.1| DNA polymerase zeta catalytic subunit, ... 91 3e-16
gb|ABD14868.1| PolA precursor [Thermococcus zilligii] 91 3e-16
ref|YP_238317.1| JM14 [Macaca fuscata rhadinovirus] >gi|465... 91 3e-16
ref|NP_594068.1| hypothetical protein SPAC688.10 [Schizosac... 91 4e-16
ref|YP_717843.1| gp176 [Bacteriophage Syn9] >gi|76574579|gb... 90 5e-16
gb|AAC44598.1| DNA polymerase 90 5e-16
gb|EAJ10361.1| unknown [environmental sequence] 90 6e-16
gb|ABK59374.1| PolB precursor [Thermococcus sp. OGL-20P] 90 6e-16
ref|XP_460862.1| hypothetical protein DEHA0F12474g [Debaryo... 90 6e-16
gb|ABC11972.1| family B-type DNA-dependent polymerase precu... 90 6e-16
ref|NP_498248.2| Y37B11A.2 [Caenorhabditis elegans] >gi|771... 90 6e-16
sp|Q94636|DPOLA_OXYNO DNA polymerase alpha catalytic subuni... 90 6e-16
gb|EAC56135.1| unknown [environmental sequence] 89 8e-16
gb|AAM62282.1|AF376034_2 DNA polymerase [badger herpesvirus] 89 8e-16
ref|NP_982443.1| AAL099Cp [Ashbya gossypii ATCC 10895] >gi|... 89 1e-15
emb|CAK79060.1| unnamed protein product [Paramecium tetraur... 89 1e-15
ref|NP_040211.1| DNA polymerase [Saimiriine herpesvirus 2] ... 89 1e-15
ref|ZP_01386584.1| DNA polymerase B, exonuclease:DNA polyme... 88 2e-15
sp|Q9HH05|DPOL_THEHY DNA polymerase [Contains: Endonuclease... 88 2e-15
ref|ZP_00532680.1| DNA polymerase B, exonuclease [Chlorobiu... 88 2e-15
ref|XP_458050.1| hypothetical protein DEHA0C09438g [Debaryo... 87 3e-15
emb|CAC84304.1| polmerase [Saimiriine herpesvirus 2] 87 3e-15
ref|XP_673793.1| hypothetical protein PB300723.00.0 [Plasmo... 87 3e-15
gb|EAI04771.1| unknown [environmental sequence] 87 4e-15
ref|NP_570750.1| DNA polymerase [Cercopithecine herpesvirus... 87 4e-15
gb|ABD46763.1| REV3 [Neurospora crassa] 87 5e-15
gb|AAY88346.1| REV3 [Neurospora crassa] 86 7e-15
gb|ABD46762.1| REV3 [Neurospora crassa] 86 7e-15
ref|XP_389074.1| hypothetical protein FG08898.1 [Gibberella... 86 7e-15
ref|XP_964235.1| hypothetical protein [Neurospora crassa OR... 86 7e-15
ref|NP_542554.1| putative DNA-dependent DNA polymerase [Hal... 86 9e-15
ref|NP_077578.1| EsV-1-93 [Ectocarpus siliculosus virus] >g... 86 9e-15
gb|ABD46758.1| REV3 [Neurospora crassa] 86 9e-15
gb|ABD46764.1| REV3 [Neurospora crassa] 86 9e-15
gb|ABD46761.1| REV3 [Neurospora crassa] 86 9e-15
ref|YP_380298.1| DNA-directed DNA polymerase B [Chlorobium ... 86 9e-15
gb|ABD46760.1| REV3 [Neurospora crassa] 85 2e-14
ref|YP_214707.1| gp43 [Cyanophage P-SSM4] >gi|61563892|gb|A... 85 2e-14
sp|Q27152|DPOLA_OXYTR DNA polymerase alpha catalytic subuni... 85 2e-14
gb|EAT92185.1| hypothetical protein SNOG_00690 [Phaeosphaer... 85 2e-14
gb|AAF81664.1|AF204167_1 DNA polymerase [Macaca nemestrina ... 85 2e-14
gb|AAG41999.1|AF322977_3 DNA polymerase [Elephantid herpesv... 85 2e-14
ref|NP_733857.1| ORF5 [Callitrichine herpesvirus 3] >gi|136... 85 2e-14
gb|AAB62593.1| ORF 09 [Human herpesvirus 8] 84 3e-14
gb|AAB67116.1| DNA-dependent DNA polymerase homolog [Feldma... 84 3e-14
ref|NP_047983.1| DNA polymerase [Ateline herpesvirus 3] >gi... 84 3e-14
gb|ABD28853.1| ORF9 [Human herpesvirus 8] 84 3e-14
ref|NP_572057.1| ORF 9; DNA polymerase homolog; EBV BALF5 h... 84 3e-14
ref|YP_195168.1| DNA polymerase gp43 [Bacteriophage S-PM2] ... 84 3e-14
sp|P30317|DPOL_THELI DNA polymerase (Vent DNA polymerase) [... 84 3e-14
ref|XP_717004.1| hypothetical protein CaO19.5182 [Candida a... 84 4e-14
gb|ABE93548.1| DNA-directed DNA polymerase B [Medicago trun... 83 6e-14
ref|XP_452640.1| unnamed protein product [Kluyveromyces lac... 83 6e-14
dbj|BAE06251.1| B-family DNA polymerase [Heterosigma akashi... 83 6e-14
ref|YP_828600.1| DNA polymerase B region [Solibacter usitat... 83 6e-14
ref|XP_001195607.1| PREDICTED: similar to DNA polymerase al... 83 8e-14
ref|NP_954286.1| DNA polymerase II, putative [Geobacter sul... 83 8e-14
sp|O05706|DPOL3_SULSH DNA polymerase 3 (DNA polymerase III)... 83 8e-14
ref|XP_001222687.1| hypothetical protein CHGG_06592 [Chaeto... 82 1e-13
gb|AAK28843.1|AF327830_1 DNA polymerase [bovine lymphotropi... 82 1e-13
gb|ABD46759.1| REV3 [Neurospora crassa] 82 1e-13
ref|ZP_00530960.1| DNA polymerase B region [Chlorobium phae... 82 1e-13
ref|XP_366910.1| hypothetical protein MG02986.4 [Magnaporth... 82 2e-13
ref|YP_136425.1| DNA polymerase B elongation subunit [Haloa... 82 2e-13
emb|CAB61753.1| DNA polymerase [Chlorocebus rhadinovirus 1] 82 2e-13
gb|EAQ71358.1| hypothetical protein MGCH7_ch7g765 [Magnapor... 82 2e-13
gb|AAG13396.2|AF283477_1 DNA polymerase [Caprine herpesviru... 81 2e-13
ref|NP_044849.1| DNA polymerase [Murid herpesvirus 4] >gi|6... 81 2e-13
sp|Q9HH84|DPOL_THEG8 DNA polymerase [Contains: Endonuclease... 81 2e-13
gb|AAG30070.1|AF282130_33 UL30 DNA polymerase [Meleagrid he... 81 3e-13
gb|ABD57304.1| REV3 [Neurospora crassa] 81 3e-13
ref|NP_073324.1| UL30 DNA polymerase catalytic subunit [Mel... 81 3e-13
gb|AAD29860.1|AF093136_1 DNA polymerase alpha catalytic sub... 81 3e-13
gb|ABB46350.1| UPR1 [Neurospora tetrasperma] 80 4e-13
gb|AAF80107.1|AF268039_1 DNA polymerase [porcine cytomegalo... 80 5e-13
gb|ABB46349.1| UPR1 [Neurospora tetrasperma] 80 5e-13
ref|XP_677988.1| DNA polymerase alpha [Plasmodium berghei s... 80 5e-13
ref|ZP_00589843.1| DNA polymerase B, exonuclease:DNA polyme... 80 5e-13
gb|ABF21966.1| DNA polymerase catalytic subunit [Human herp... 80 6e-13
gb|ABF21820.1| DNA polymerase catalytic subunit [Human herp... 80 6e-13
gb|ABF21893.1| DNA polymerase catalytic subunit [Human herp... 80 6e-13
gb|AAL06317.1| DNA polymerase [Pan rhadino-herpesvirus 2] 80 6e-13
gb|AAL06318.1| DNA polymerase [Pan rhadino-herpesvirus 2] 80 6e-13
ref|NP_040151.1| DNA polymerase catalytic subunit [Human he... 80 6e-13
gb|EAK71162.1| unknown [environmental sequence] 79 8e-13
emb|CAD42683.1| putative DNA polymerase B [uncultured crena... 79 8e-13
gb|AAL06316.1| DNA polymerase [Pan rhadino-herpesvirus 2] 79 8e-13
ref|YP_068333.1| DNA polymerase [Suid herpesvirus 1] >gi|43... 79 8e-13
gb|EAH98896.1| unknown [environmental sequence] 79 1e-12
gb|AAF80109.1|AF268041_1 DNA polymerase; DPOL [porcine cyto... 79 1e-12
gb|AAF80108.1|AF268040_1 DNA polymerase; DPOL [porcine cyto... 79 1e-12
gb|AAF80111.1|AF268042_2 DNA polymerase; DPOL [porcine cyto... 79 1e-12
ref|YP_326412.1| DNA-directed DNA polymerase (family B) [Na... 79 1e-12
pir||E64410 DNA-directed DNA polymerase (EC 2.7.7.7) family... 79 1e-12
ref|NP_247880.1| DNA polymerase B1 [Methanocaldococcus jann... 79 1e-12
ref|ZP_00592424.1| DNA polymerase B, exonuclease:DNA polyme... 79 1e-12
ref|XP_726706.1| DNA polymerase alpha [Plasmodium yoelii yo... 79 1e-12
ref|XP_001306852.1| polymerase, putative [Trichomonas vagin... 78 2e-12
gb|ABF22039.1| DNA polymerase catalytic subunit [Human herp... 78 2e-12
ref|YP_073706.1| DNA polymerase elongation subunit family B... 78 2e-12
ref|NP_078724.1| DNA polymerase family B [Lymphocystis dise... 78 2e-12
ref|NP_015158.1| Catalytic subunit of DNA polymerase zeta, ... 78 2e-12
dbj|BAB41072.1| DNA polymerase [Human herpesvirus 3] >gi|66... 78 2e-12
ref|ZP_00512192.1| DNA polymerase B, exonuclease:DNA polyme... 78 2e-12
ref|YP_373940.1| DNA-directed DNA polymerase B [Pelodictyon... 78 2e-12
ref|YP_134417.1| DNA polymerase B2 exonuclease domain [Halo... 78 2e-12
dbj|BAB41075.1| DNA polymerase [Human herpesvirus 3] 78 2e-12
gb|EAF75720.1| unknown [environmental sequence] 77 3e-12
ref|XP_786092.2| PREDICTED: similar to DNA polymerase zeta ... 77 3e-12
ref|XP_758078.1| hypothetical protein UM01931.1 [Ustilago m... 77 3e-12
gb|EAJ39637.1| unknown [environmental sequence] 77 4e-12
gb|EAB61458.1| unknown [environmental sequence] 77 5e-12
ref|YP_073778.1| U38 [Human herpesvirus 7] >gi|2746268|gb|A... 77 5e-12
sp|P52342|DPOL_HHV7J DNA polymerase >gi|1139640|gb|AAC54700... 77 5e-12
ref|YP_910521.1| DNA polymerase B region [Chlorobium phaeob... 77 5e-12
dbj|BAB41073.1| DNA polymerase [Human herpesvirus 3] 76 7e-12
dbj|BAE94412.1| DNA polymerase II [uncultured crenarchaeote] 76 9e-12
ref|XP_746040.1| DNA polymerase alpha [Plasmodium chabaudi ... 76 9e-12
gb|AAK28844.1|AF327831_1 DNA polymerase [Ovine herpesvirus 2] 75 1e-11
gb|AAK30251.1|AF351198_1 DNA polymerase delta catalytic cha... 75 2e-11
gb|EAK59228.1| unknown [environmental sequence] 75 2e-11
ref|XP_449434.1| hypothetical protein CAGL0M02035g [Candida... 75 2e-11
dbj|BAB41074.1| DNA polymerase [Human herpesvirus 3] 75 2e-11
gb|AAK54493.1|AF368230_1 RSIV DNA polymerase-like protein [... 74 3e-11
ref|ZP_01466953.1| DNA polymerase B, exonuclease [Stigmatel... 74 5e-11
dbj|BAE94413.1| DNA polymerase II [uncultured crenarchaeote] 74 5e-11
emb|CAJ04879.1| DNA polymerase zeta catalytic subunit, puta... 74 5e-11
gb|AAL77804.1|AF389451_11 DNA polymerase-like protein [Tige... 73 8e-11
ref|XP_502101.1| hypothetical protein [Yarrowia lipolytica]... 73 8e-11
ref|NP_395847.1| DNA polymerase B2 [Halobacterium sp. NRC-1... 72 1e-10
ref|YP_802988.1| DNA polymerase [Bacteriophage RB32] >gi|11... 71 2e-10
emb|CAJ37775.1| putative DNA-directed DNA polymerase B [unc... 71 2e-10
ref|YP_031639.1| DNA polymerase-like protein [Frog virus 3]... 71 2e-10
gb|AAB28217.1| DNA polymerase alpha, DNAPol alpha [Plasmodi... 71 2e-10
ref|NP_049662.1| gp43 DNA polymerase [Enterobacteria phage ... 71 2e-10
gb|ABM92130.1| DNA polymerase [Duck enteritis virus] 71 3e-10
ref|NP_963808.1| hypothetical protein NEQ528 [Nanoarchaeum ... 71 3e-10
ref|NP_275351.1| DNA-dependent DNA polymerase family B (Pol... 71 3e-10
ref|NP_899330.1| DNA polymerase [Vibrio phage KVP40] >gi|34... 70 4e-10
ref|XP_001351430.1| DNA polymerase alpha [Plasmodium falcip... 70 4e-10
gb|AAK14825.1| DNA polymerase alpha [Plasmodium falciparum] 70 4e-10
gb|AAR05086.1| DNA polymerase [Phaeocystis globosa virus] 70 5e-10
sp|P74918|DPOL_THEFM DNA polymerase (Pol Tfu) [Contains: En... 70 5e-10
ref|XP_666513.1| DNA polymerase alpha, DNAPol alpha [Crypto... 70 5e-10
ref|ZP_00609157.1| DNA polymerase B domain [Ferroplasma aci... 70 5e-10
ref|YP_654692.1| hypothetical protein MIV120R [Aedes taenio... 70 7e-10
ref|YP_003817.1| DNA polymerase [Ambystoma tigrinum virus] ... 70 7e-10
gb|AAR05089.1| DNA polymerase [Phaeocystis globosa virus] >... 70 7e-10
sp|O33845|DPOL_THEAG DNA polymerase (Pol Tfu) [Contains: Ta... 70 7e-10
gb|EAJ82673.1| unknown [environmental sequence] 69 9e-10
ref|NP_944403.1| DNA polymerase [Psittacid herpesvirus 1] >... 69 1e-09
sp|Q69025|DPOL_GPCMV DNA polymerase >gi|459763|gb|AAA43832.... 69 1e-09
ref|XP_001303643.1| DNA polymerase family B containing prot... 69 1e-09
emb|CAI19192.1| REV3-like, catalytic subunit of DNA polymer... 69 1e-09
emb|CAI19191.1| REV3-like, catalytic subunit of DNA polymer... 69 1e-09
gb|AAG09402.1|AF179428_1 DNA polymerase zeta catalytic subu... 69 1e-09
ref|NP_002903.1| REV3-like, catalytic subunit of DNA polyme... 69 1e-09
gb|AAB88486.1| DNA polymerase zeta [Homo sapiens] 69 1e-09
ref|XP_686511.1| PREDICTED: similar to DNA polymerase alpha... 69 1e-09
sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit... 69 1e-09
ref|XP_001251273.1| PREDICTED: similar to REV3-like, cataly... 68 2e-09
ref|XP_870894.2| PREDICTED: similar to REV3-like, catalytic... 68 2e-09
gb|AAW57296.1| DNA polymerase [Murid herpesvirus 2] 68 2e-09
ref|ZP_00660975.1| DNA polymerase B, exonuclease:DNA polyme... 68 2e-09
gb|EAB71588.1| unknown [environmental sequence] 68 2e-09
gb|EAB22052.1| unknown [environmental sequence] 68 2e-09
gb|AAR05088.1| DNA polymerase [Phaeocystis globosa virus] 68 2e-09
ref|NP_341651.1| DNA polymerase III (DNA polymerase B3) (pf... 67 3e-09
ref|NP_393928.1| DNA polymerase II [Thermoplasma acidophilu... 67 3e-09
gb|EAD73902.1| unknown [environmental sequence] 67 4e-09
gb|EAG58057.1| unknown [environmental sequence] 67 4e-09
gb|EAC72286.1| unknown [environmental sequence] 67 4e-09
ref|XP_426179.2| PREDICTED: similar to DNA polymerase zeta ... 67 4e-09
gb|AAR05087.1| DNA polymerase [Phaeocystis globosa virus] 67 4e-09
ref|NP_077443.1| DNA polymerase [Cercopithecine herpesvirus... 67 4e-09
ref|XP_001086055.1| PREDICTED: REV3-like, catalytic subunit... 67 6e-09
gb|AAT71835.1| DNA polymerase type-B family member [Rock br... 67 6e-09
gb|AAR05084.1| DNA polymerase [Phaeocystis globosa virus] 67 6e-09
ref|XP_539084.2| PREDICTED: similar to DNA polymerase zeta ... 67 6e-09
ref|XP_665153.1| DNA polymerase family B subunit [Cryptospo... 67 6e-09
ref|XP_228273.4| PREDICTED: similar to DNA polymerase zeta ... 66 7e-09
ref|NP_612241.1| putative DNA polymerase [Infectious spleen... 66 7e-09
ref|YP_214414.1| T4-like DNA polymerase [Cyanophage P-SSM2]... 66 7e-09
ref|XP_569204.1| zeta DNA polymerase [Cryptococcus neoforma... 66 7e-09
dbj|BAE36943.1| unnamed protein product [Mus musculus] 66 7e-09
dbj|BAA11461.1| DNA polymerase [Mus musculus] 66 7e-09
sp|Q61493|DPOLZ_MOUSE DNA polymerase zeta catalytic subunit... 66 7e-09
ref|NP_035394.1| REV3-like, catalytic subunit of DNA polyme... 66 7e-09
gb|EAL24900.1| GA15135-PA [Drosophila pseudoobscura] 66 7e-09
gb|EAL22753.1| hypothetical protein CNBB2010 [Cryptococcus ... 66 7e-09
gb|AAX82331.1| DNA polymerase [Orange-spotted grouper irido... 66 9e-09
gb|AAS47466.1| DNA polymerase [Murid herpesvirus 4] >gi|444... 66 9e-09
gb|AAS47480.1| DNA polymerase [Murid herpesvirus 4] >gi|124... 66 9e-09
gb|AAS47478.1| DNA polymerase [Murid herpesvirus 4] 66 9e-09
gb|AAS47481.1| DNA polymerase [Murid herpesvirus 4] 66 9e-09
ref|XP_815001.1| DNA polymerase zeta catalytic subunit [Try... 66 9e-09
emb|CAK57293.1| unnamed protein product [Paramecium tetraur... 65 1e-08
gb|AAS47472.1| DNA polymerase [Murid herpesvirus 4] 65 1e-08
gb|AAS47469.1| DNA polymerase [Murid herpesvirus 4] 65 1e-08
gb|AAR05085.1| DNA polymerase [Phaeocystis globosa virus] 65 1e-08
ref|NP_663155.1| DNA polymerase family B protein [Chlorobiu... 65 1e-08
ref|XP_001322798.1| DNA polymerase family B containing prot... 65 2e-08
emb|CAF05813.1| delta DNA polymerase [Spodoptera exiguae as... 65 2e-08
gb|AAL55728.1|AF275657_1 DNA polymerase [Badger herpesvirus] 65 2e-08
gb|AAS47471.1| DNA polymerase [Murid herpesvirus 4] 65 2e-08
gb|AAS47470.1| DNA polymerase [Murid herpesvirus 4] 65 2e-08
gb|EAG29737.1| unknown [environmental sequence] 64 3e-08
gb|AAS47477.1| DNA polymerase [Murid herpesvirus 4] 64 3e-08
gb|AAS47483.1| DNA polymerase [Murid herpesvirus 4] 64 3e-08
gb|AAS47476.1| DNA polymerase [Murid herpesvirus 4] 64 3e-08
gb|AAT79466.1| DNA polymerase [Vulture herpesvirus] 64 3e-08
sp|O70736|DPOL_RSIV DNA polymerase >gi|3176380|dbj|BAA28669... 64 3e-08
gb|AAS47468.1| DNA polymerase [Murid herpesvirus 4] 64 4e-08
gb|AAR26842.1| FirrV-1-A18 [Feldmannia irregularis virus a] 64 4e-08
ref|NP_064160.1| pR54 [Murid herpesvirus 2] >gi|21264440|sp... 64 4e-08
gb|EAT38236.1| DNA polymerase zeta catalytic subunit [Aedes... 64 5e-08
gb|AAS47485.1| DNA polymerase [Murid herpesvirus 4] 64 5e-08
gb|AAS47482.1| DNA polymerase [Murid herpesvirus 4] 64 5e-08
ref|XP_685242.1| PREDICTED: similar to DNA polymerase alpha... 64 5e-08
emb|CAC84133.1| delta DNA polymerase [Iridovirus RMIV (IV22... 64 5e-08
ref|XP_001017761.1| DNA polymerase family B containing prot... 63 6e-08
gb|AAU29238.1| T4 gp43-like, DNA polymerase [Enterobacteria... 63 6e-08
sp|P27172|DPOL_MCMVS DNA polymerase >gi|330518|gb|AAA45940.... 63 6e-08
gb|EAB45965.1| unknown [environmental sequence] 63 8e-08
gb|AAS47479.1| DNA polymerase [Murid herpesvirus 4] 63 8e-08
gb|AAS47484.1| DNA polymerase [Murid herpesvirus 4] 63 8e-08
gb|AAL58191.1|AF236050_1 DNA polymerase [California sea lio... 63 8e-08
ref|YP_053075.1| DNA polymerase [Equid herpesvirus 1] >gi|1... 63 8e-08
gb|EAI16560.1| unknown [environmental sequence] 62 1e-07
gb|EAC76327.1| unknown [environmental sequence] 62 1e-07
gb|AAY43136.1| DNA polymerase [Heliotis virescens ascovirus... 62 1e-07
emb|CAF05812.1| delta DNA polymerase [Heliotis virescens as... 62 1e-07
gb|AAL13918.1| LD40801p [Drosophila melanogaster] 62 1e-07
ref|NP_524881.2| mutagen-sensitive 205 CG1925-PA [Drosophil... 62 1e-07
ref|XP_001203298.1| PREDICTED: similar to Pold protein, par... 62 1e-07
ref|XP_847160.1| DNA polymerase zeta catalytic subunit, put... 62 1e-07
gb|AAC38856.1| DNA polymerase alpha [Paraurostyla viridis] 62 1e-07
sp|Q6S6P1|DPOL_EHV1V DNA polymerase >gi|42795157|gb|AAS4591... 62 1e-07
emb|CAE64391.1| Hypothetical protein CBG09081 [Caenorhabdit... 62 1e-07
gb|EAJ15141.1| unknown [environmental sequence] 62 2e-07
gb|EAI48768.1| unknown [environmental sequence] 62 2e-07
gb|EAD79457.1| unknown [environmental sequence] 62 2e-07
gb|AAO11798.1| DNA polymerase [unknown phycodnavirus] 62 2e-07
emb|CAC19127.1| delta DNA polymerase [Diadromus pulchellus ... 62 2e-07
ref|XP_001011832.1| DNA polymerase family B containing prot... 62 2e-07
ref|NP_111564.1| DNA polymerase II [Thermoplasma volcanium ... 62 2e-07
emb|CAL49423.1| REV3-like, catalytic subunit of DNA polymer... 61 2e-07
gb|AAY43139.1| DNA polymerase [Trichoplusia ni ascovirus 2d] 61 2e-07
dbj|BAA78259.1| DNA polymerase [Human herpesvirus 6B] 61 2e-07
ref|NP_050219.1| DNA polymerase [Human herpesvirus 6B] >gi|... 61 2e-07
dbj|BAC21632.1| hypothetical protein [Macaca fascicularis] 61 3e-07
ref|NP_861746.1| gp43 DNA polymerase [Enterobacteria phage ... 61 3e-07
gb|AAD55134.1|AF181249_1 DNA-dependent DNA polymerase [Bovi... 60 4e-07
gb|AAC18785.1|AAC18785 Similar to putative DNA polymerase g... 60 4e-07
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catal... 60 4e-07
ref|NP_068312.1| PxORF93 peptide [Plutella xylostella granu... 60 4e-07
ref|NP_176917.2| ATREV3; DNA binding [Arabidopsis thaliana]... 60 4e-07
gb|AAO11797.1| DNA polymerase [unknown phycodnavirus] 60 5e-07
ref|YP_238764.1| DNA polymerase, N-terminal fragment [Aerom... 60 5e-07
ref|NP_932391.1| DNA polymerase, N-terminal fragment; gp43 ... 60 5e-07
ref|NP_835679.1| similar to DNA-directed DNA polymerase [Ba... 60 5e-07
gb|EAK10434.1| unknown [environmental sequence] 60 7e-07
ref|NP_148473.2| DNA polymerase II [Aeropyrum pernix K1] >g... 60 7e-07
gb|AAL02187.1|AF405576_1 DNA polymerase [unknown phycodnavi... 60 7e-07
gb|AAC38862.1| DNA polymerase alpha [Urostyla grandis] 60 7e-07
ref|YP_448301.1| hypothetical protein Msp_1281 [Methanospha... 60 7e-07
gb|AAV91098.1| DNA polymerase [Grouper iridovirus] 59 9e-07
gb|AAB60596.1| DNA-directed DNA polymerase 59 9e-07
sp|P42489|DPOL_ASFB7 DNA polymerase >gi|457624|gb|AAA42690.... 59 9e-07
sp|P43139|DPOL_ASFL6 DNA polymerase >gi|397586|emb|CAA51757... 59 9e-07
ref|NP_042783.1| DNA polymerase [African swine fever virus]... 59 9e-07
ref|YP_629872.1| putative DNA polymerase II [Myxococcus xan... 59 1e-06
emb|CAC12848.1| DNA polymerase [Thermococcus chitonophagus] 59 1e-06
gb|AAB60597.1| DNA-directed DNA polymerase 59 1e-06
emb|CAC84471.1| delta DNA polymerase [Heliotis virescens as... 59 1e-06
emb|CAC16596.1| DNA polymerase [Pan troglodytes rhadinoviru... 59 1e-06
gb|AAO11799.1| DNA polymerase [unknown phycodnavirus] 59 2e-06
gb|AAL02198.1|AF405587_1 DNA polymerase [unknown phycodnavi... 59 2e-06
gb|AAC38857.1| DNA polymerase alpha [Stylonychia lemnae] 59 2e-06
gb|AAC38861.1| DNA polymerase alpha [Uroleptus gallina] 59 2e-06
gb|AAR10814.1| DNA polymerase [Marine aerosol phycodnavirus] 58 2e-06
gb|AAL02207.1|AF405596_1 DNA polymerase [unknown phycodnavi... 58 2e-06
gb|AAG30223.1| DNA polymerase zeta catalytic subunit [Droso... 58 2e-06
ref|XP_361376.1| hypothetical protein MG03850.4 [Magnaporth... 58 3e-06
gb|AAL02205.1|AF405594_1 DNA polymerase [unknown phycodnavi... 58 3e-06
gb|AAL02190.1|AF405579_1 DNA polymerase [unknown phycodnavi... 58 3e-06
gb|AAF21598.1|AF004713_1 DNA-dependent DNA polymerase [Homo... 58 3e-06
gb|AAB60598.1| DNA-directed DNA polymerase 58 3e-06
ref|YP_657473.1| DNA-directed DNA polymerase (family B) [Ha... 57 3e-06
gb|ABE90691.1| DNA-directed DNA polymerase B [Medicago trun... 57 3e-06
ref|NP_042931.1| U38, DNA polymerase [Human herpesvirus 6A]... 57 3e-06
ref|NP_377652.1| hypothetical DNA-directed DNA polymerase I... 57 3e-06
ref|YP_164223.1| DNA polymerase [Singapore grouper iridovir... 57 4e-06
gb|AAC38859.1| DNA polymerase alpha [Halteria sp.] 57 4e-06
ref|XP_448057.1| unnamed protein product [Candida glabrata]... 57 4e-06
ref|XP_001227892.1| conserved hypothetical protein [Chaetom... 57 4e-06
gb|EAF23694.1| unknown [environmental sequence] 57 6e-06
ref|YP_164473.1| DNA polymerase catalytic subunit [Cercopit... 57 6e-06
ref|NP_954917.1| DNA polymerase catalytic subunit [Bovine h... 57 6e-06
gb|AAR10815.1| DNA polymerase [Marine aerosol phycodnavirus] 57 6e-06
gb|AAO11800.1| DNA polymerase [unknown phycodnavirus] 57 6e-06
gb|AAL02188.1|AF405577_1 DNA polymerase [unknown phycodnavi... 57 6e-06
ref|YP_656272.1| gp43 split DNA polymerase [Aeromonas phage... 57 6e-06
gb|AAB49748.1| DNA polymerase 57 6e-06
ref|NP_045247.1| 30 [Equid herpesvirus 4] >gi|2605974|gb|AA... 57 6e-06
ref|XP_868501.1| PREDICTED: similar to DNA polymerase zeta ... 57 6e-06
emb|CAA12264.1| DNA polymerase [Felid herpesvirus 1] 57 6e-06
ref|YP_502310.1| DNA polymerase B region [Methanospirillum ... 56 8e-06
gb|EAC55888.1| unknown [environmental sequence] 56 1e-05
ref|YP_182359.1| DNA polymerase [Gallid herpesvirus 1] >gi|... 56 1e-05
dbj|BAA93702.1| DNA polymerase B2 [Sulfurisphaera ohwakuensis] 56 1e-05
sp|P07918|DPOL_HHV21 DNA polymerase >gi|330292|gb|AAA45853.... 56 1e-05
gb|EAB90452.1| unknown [environmental sequence] 55 1e-05
pdb|2DTU|A Chain A, Crystal Structure Of The Beta Hairpin L... 55 1e-05
gb|AAL02209.1|AF405598_1 DNA polymerase [unknown phycodnavi... 55 1e-05
gb|AAK28931.1| DNA polymerase [Paramecium bursaria Chlorell... 55 1e-05
gb|AAK28921.1| DNA polymerase [Paramecium bursaria Chlorell... 55 1e-05
gb|AAD01637.1| DNA polymerase epsilon homolog [Aspergillus ... 55 1e-05
ref|NP_045328.1| DNA polymerase catalytic subunit [Bovine h... 55 1e-05
ref|XP_660671.1| hypothetical protein AN3067.2 [Aspergillus... 55 1e-05
gb|EAC31253.1| unknown [environmental sequence] 55 2e-05
gb|AAK28951.1| DNA polymerase [Paramecium bursaria Chlorell... 55 2e-05
gb|AAK28924.1| DNA polymerase [Paramecium bursaria Chlorell... 55 2e-05
gb|ABD62757.1| DNA polymerase [Phaeocystis globosa virus] 55 2e-05
dbj|BAE19744.1| DNA polymerase UL30 [Human herpesvirus 1] 55 2e-05
gb|EAC42497.1| unknown [environmental sequence] 55 2e-05
gb|AAO11795.1| DNA polymerase [unknown phycodnavirus] 55 2e-05
gb|AAZ80589.1| rhUL54 [Cercopithecine herpesvirus 8] 55 2e-05
gb|AAF61904.1|AF215639_1 DNA polymerase [Spodoptera littora... 55 2e-05
pdb|1Q9Y|A Chain A, Crystal Structure Of Enterobacteria Pha... 55 2e-05
pdb|1IG9|A Chain A, Structure Of The Replicating Complex Of... 55 2e-05
ref|YP_068180.1| rh87 [Cercopithecine herpesvirus 8] >gi|60... 55 2e-05
ref|XP_779847.1| DNA-directed DNA polymerase delta subunit ... 55 2e-05
gb|AAK28919.1| DNA polymerase [Paramecium bursaria Chlorell... 54 3e-05
gb|AAL02191.1|AF405580_1 DNA polymerase [unknown phycodnavi... 54 3e-05
gb|AAK28930.1| DNA polymerase [Paramecium bursaria Chlorell... 54 3e-05
emb|CAA26941.1| DNA polymerase [Human herpesvirus 1] 54 4e-05
gb|AAN87165.1| DNA polymerase [Baboon herpesvirus 2] 54 4e-05
ref|YP_443877.1| DNA polymerase catalytic subunit [Cercopit... 54 4e-05
sp|P07917|DPOL_HHV1A DNA polymerase >gi|59861|emb|CAA28183.... 54 4e-05
ref|NP_044632.1| DNA polymerase catalytic subunit [Human he... 54 4e-05
ref|NP_014137.1| Catalytic subunit of DNA polymerase epsilo... 54 4e-05
emb|CAA63235.1| POL2 [Saccharomyces cerevisiae] 54 4e-05
ref|XP_656768.1| DNA polymerase zeta catalytic subunit [Ent... 54 4e-05
gb|EAC36376.1| unknown [environmental sequence] 54 5e-05
gb|EAB59120.1| unknown [environmental sequence] 54 5e-05
ref|XP_001270952.1| DNA polymerase epsilon, catalytic subun... 54 5e-05
gb|AAO11792.1| DNA polymerase [unknown phycodnavirus] 54 5e-05
gb|AAO11796.1| DNA polymerase [unknown phycodnavirus] 54 5e-05
gb|AAB49739.1| DNA polymerase [Chrysochromulina brevifilum ... 54 5e-05
gb|AAK28952.1| DNA polymerase [Paramecium bursaria Chlorell... 54 5e-05
gb|AAK28956.1| DNA polymerase [Paramecium bursaria Chlorell... 54 5e-05
sp|P09854|DPOL_HHV1S DNA polymerase >gi|59840|emb|CAA28464.... 54 5e-05
ref|NP_342896.1| DNA polymerase II (DNA polymerase B2) carb... 54 5e-05
sp|Q07635|DPOL2_SULSO DNA polymerase 2 (DNA polymerase II) ... 54 5e-05
emb|CAA50600.1| 70 kDa DNA polymerase [Sulfolobus solfatari... 54 5e-05
dbj|BAB69448.1| DNA polymerase [Human herpesvirus 1] 54 5e-05
gb|EAF89519.1| unknown [environmental sequence] 53 6e-05
gb|EAC29233.1| unknown [environmental sequence] 53 6e-05
gb|EAD81878.1| unknown [environmental sequence] 53 6e-05
emb|CAK84879.1| unnamed protein product [Paramecium tetraur... 53 6e-05
ref|XP_001263503.1| DNA polymerase epsilon, catalytic subun... 53 6e-05
gb|ABI63492.1| UL30 [Human herpesvirus 1] 53 6e-05
ref|YP_758381.1| dnapol [Leucania separata nuclear polyhedr... 53 6e-05
pdb|2GV9|A Chain A, Crystal Structure Of The Herpes Simplex... 53 6e-05
gb|AAO11794.1| DNA polymerase [unknown phycodnavirus] 53 6e-05
gb|AAK28920.1| DNA polymerase [Paramecium bursaria Chlorell... 53 6e-05
gb|AAL02185.1|AF405574_1 DNA polymerase [unknown phycodnavi... 53 6e-05
gb|AAB18298.1| DNA polymerase [unidentified phycodnavirus c... 53 6e-05
dbj|BAE19749.1| DNA polymerase UL30 [Human herpesvirus 1] 53 6e-05
dbj|BAE19745.1| DNA polymerase UL30 [Human herpesvirus 1] 53 6e-05
dbj|BAE19746.1| DNA polymerase UL30 [Human herpesvirus 1] 53 6e-05
dbj|BAE19747.1| DNA polymerase UL30 [Human herpesvirus 1] 53 6e-05
pdb|1RV2|A Chain A, Crystal Structure Of Rb69 Gp43 In Compl... 53 6e-05
dbj|BAB64292.2| DNA polymerase [Human herpesvirus 1] >gi|73... 53 6e-05
sp|P04292|DPOL_HHV1K DNA polymerase >gi|330186|gb|AAA66438.... 53 6e-05
ref|XP_754663.1| DNA polymerase epsilon, catalytic subunit ... 53 6e-05
ref|XP_386241.1| hypothetical protein FG06065.1 [Gibberella... 53 6e-05
gb|AAK28923.1| DNA polymerase [Paramecium bursaria Chlorell... 53 8e-05
gb|AAK72381.1| DNA polymerase [human herpesvirus 2] 53 8e-05
dbj|BAE56228.1| unnamed protein product [Aspergillus oryzae] 53 8e-05
ref|NP_044500.1| DNA polymerase catalytic subunit [Human he... 53 8e-05
gb|EAB21243.1| unknown [environmental sequence] 52 1e-04
ref|NP_891597.1| DNA polymerase [Enterobacteria phage RB49]... 52 1e-04
gb|AAL02201.1|AF405590_1 DNA polymerase [unknown phycodnavi... 52 1e-04
ref|NP_943895.1| DNA polymerase [Bacteriophage Aeh1] >gi|33... 52 1e-04
gb|AAB66713.1| DNA polymerase [Micromonas pusilla virus SP1] 52 1e-04
ref|NP_116408.1| T54 [Tupaia herpesvirus] >gi|9296964|sp|Q9... 52 1e-04
sp|Q9YUS3|DPOL_TUHV1 DNA polymerase >gi|4165073|gb|AAD08666... 52 1e-04
gb|EAB35769.1| unknown [environmental sequence] 52 2e-04
gb|EAD86821.1| unknown [environmental sequence] 52 2e-04
gb|AAO11791.1| DNA polymerase [unknown phycodnavirus] 52 2e-04
gb|AAL02193.1|AF405582_1 DNA polymerase [unknown phycodnavi... 52 2e-04
ref|XP_712675.1| DNA polymerase II subunit epsilon [Candida... 52 2e-04
ref|XP_955939.1| hypothetical protein [Neurospora crassa OR... 52 2e-04
gb|EAE80033.1| unknown [environmental sequence] 51 2e-04
gb|AAB49741.1| DNA polymerase [Micromonas pusilla virus SP2] 51 2e-04
gb|AAB49740.1| DNA polymerase [Chrysochromulina brevifilum ... 51 2e-04
gb|AAK72380.1| DNA polymerase [human herpesvirus 2] 51 2e-04
ref|XP_452312.1| unnamed protein product [Kluyveromyces lac... 51 2e-04
ref|XP_001248123.1| hypothetical protein CIMG_01894 [Coccid... 51 3e-04
gb|AAL02203.1|AF405592_1 DNA polymerase [unknown phycodnavi... 51 3e-04
gb|AAL02202.1|AF405591_1 DNA polymerase [unknown phycodnavi... 51 3e-04
emb|CAF94751.1| unnamed protein product [Tetraodon nigrovir... 51 3e-04
gb|EAC08406.1| unknown [environmental sequence] 50 4e-04
gb|AAT38486.1| gp43A [Acinetobacter phage 133] 50 4e-04
gb|AAL02204.1|AF405593_1 DNA polymerase [unknown phycodnavi... 50 4e-04
gb|AAL02189.1|AF405578_1 DNA polymerase [unknown phycodnavi... 50 4e-04
dbj|BAB64293.2| DNA polymerase [Human herpesvirus 1] 50 4e-04
gb|EAD20401.1| unknown [environmental sequence] 50 5e-04
gb|EAE40728.1| unknown [environmental sequence] 50 5e-04
gb|EAT80363.1| hypothetical protein SNOG_11951 [Phaeosphaer... 50 5e-04
gb|AAL02199.1|AF405588_1 DNA polymerase [unknown phycodnavi... 50 5e-04
gb|AAH48166.1| Polymerase (DNA directed), epsilon [Mus musc... 50 5e-04
gb|AAD45244.1|AF123502_1 DNA polymerase epsilon catalytic s... 50 5e-04
gb|AAT67222.1| DNA polymerase catalytic subunit [Cercopithe... 50 5e-04
dbj|BAE24794.1| unnamed protein product [Mus musculus] 50 5e-04
ref|NP_851890.1| DNA polymerase catalytic subunit [Cercopit... 50 5e-04
ref|NP_035262.1| DNA polymerase epsilon catalytic subunit [... 50 5e-04
gb|EAA81933.1| unknown [environmental sequence] 50 7e-04
gb|ABC33905.1| DNA polymerase [Risso's dolphin gammaherpesv... 50 7e-04
gb|AAL02206.1|AF405595_1 DNA polymerase [unknown phycodnavi... 50 7e-04
gb|AAL02208.1|AF405597_1 DNA polymerase [unknown phycodnavi... 50 7e-04
gb|EAF32604.1| unknown [environmental sequence] 49 0.001
gb|ABC33906.1| DNA polymerase [Atlantic bottlenose dolphin ... 49 0.001
gb|AAX86472.1| DNA polymerase [Paramecium bursaria Chlorell... 49 0.001
gb|AAK28933.1| DNA polymerase [Paramecium bursaria Chlorell... 49 0.001
gb|AAK28932.1| DNA polymerase [Paramecium bursaria Chlorell... 49 0.001
ref|NP_071265.1| DNA polymerase II [Archaeoglobus fulgidus ... 49 0.001
ref|NP_559083.1| possible DNA-directed DNA polymerase (B2) ... 49 0.001
ref|NP_818705.1| DNA polymerase [Adoxophyes honmai NPV] >gi... 49 0.001
gb|AAL02197.1|AF405586_1 DNA polymerase [unknown phycodnavi... 49 0.002
gb|AAL02184.1|AF405573_1 DNA polymerase [unknown phycodnavi... 49 0.002
gb|AAL02196.1|AF405585_1 DNA polymerase [unknown phycodnavi... 49 0.002
ref|NP_663268.1| DNA polymerase [Phthorimaea operculella gr... 49 0.002
gb|AAL02200.1|AF405589_1 DNA polymerase [unknown phycodnavi... 49 0.002
ref|NP_932390.1| DNA polymerase, C-terminal fragment; gp43B... 49 0.002
gb|AAO51574.1| similar to Arabidopsis thaliana (Mouse-ear c... 49 0.002
ref|ZP_00784248.1| DNA polymerase delta large chain, fragme... 49 0.002
ref|XP_645553.1| DNA polymerase zeta catalytic subunit [Dic... 49 0.002
gb|EAK78233.1| unknown [environmental sequence] 48 0.002
gb|EAG22370.1| unknown [environmental sequence] 48 0.002
gb|AAR90916.1| gp43A core DNA polymerase of replisome [Aero... 48 0.002
gb|AAO11793.1| DNA polymerase [unknown phycodnavirus] 48 0.002
gb|AAX47054.1| DNA polymerase [Bottlenose dolphin gammaherp... 48 0.002
ref|YP_446104.1| putative DNA polymerase II [Salinibacter r... 48 0.002
gb|AAA81882.1| DNA polymerase 48 0.002
ref|XP_001208903.1| hypothetical protein ATEG_01538 [Asperg... 48 0.003
ref|NP_037853.1| ORF93 DNA polymerase [Spodoptera exigua nu... 48 0.003
ref|NP_542692.1| DNA polymerase [Helicoverpa zea single nuc... 48 0.003
gb|AAX55678.1| DNA polymerase [Bottlenose dolphin herpesvirus] 48 0.003
gb|AAB08423.1| DNA polymerase [Helicoverpa armigera nuclear... 48 0.003
gb|AAC33749.1| DNA polymerase [Spodoptera exigua nucleopoly... 48 0.003
ref|NP_203622.1| DNA polymerase [Helicoverpa armigera nucle... 48 0.003
ref|NP_075136.1| DNA pol [Heliocoverpa armigera nucleopolyh... 48 0.003
ref|YP_239014.1| gp43 DNA polymerase [Enterobacteria phage ... 48 0.003
ref|NP_172303.1| EMB2284; 3'-5' exonuclease/ DNA binding / ... 48 0.003
ref|YP_762356.1| 125.8 kDa Delta DNA Polymerase [Spodoptera... 48 0.003
emb|CAA46847.1| DNA-directed DNA polymerase [Physarum polyc... 47 0.005
dbj|BAC27362.1| unnamed protein product [Mus musculus] 47 0.005
ref|YP_529770.1| DNAPOL [Agrotis segetum nucleopolyhedrovir... 47 0.005
gb|AAX55676.1| DNA polymerase [Atlantic bottlenose dolphin ... 47 0.005
gb|AAX47051.1| DNA polymerase [Blainville's beaked whale ga... 47 0.005
gb|AAX47053.1| DNA polymerase [Dwarf sperm whale gammaherpe... 47 0.005
gb|AAA58700.1| DNA-directed DNA polymerase 47 0.005
ref|NP_986205.1| AFR657Cp [Ashbya gossypii ATCC 10895] >gi|... 47 0.005
ref|XP_757155.1| hypothetical protein UM01008.1 [Ustilago m... 47 0.005
gb|EAG97427.1| unknown [environmental sequence] 47 0.006
gb|EAD20311.1| unknown [environmental sequence] 47 0.006
gb|EAF23367.1| unknown [environmental sequence] 47 0.006
gb|EAB61873.1| unknown [environmental sequence] 47 0.006
gb|EAD83507.1| unknown [environmental sequence] 47 0.006
gb|AAX47050.1| DNA polymerase [Canid herpesvirus 1] 47 0.006
dbj|BAA82555.1| DNA polymerase [Porcine cytomegalovirus OF-1] 47 0.006
ref|XP_639211.1| putative DNA polymerase epsilon subunit A ... 47 0.006
ref|XP_001233985.1| PREDICTED: polymerase (DNA directed), e... 46 0.008
emb|CAH65230.1| hypothetical protein [Gallus gallus] 46 0.008
gb|AAR90917.1| gp43B core DNA polymerase of replisome [Aero... 46 0.008
gb|AAB49742.1| DNA polymerase [Micromonas pusilla virus GM1... 46 0.008
ref|NP_258337.1| DNA polymerase [Spodoptera litura nucleopo... 46 0.008
ref|YP_656270.1| gp43 split DNA polymerase [Aeromonas phage... 46 0.008
gb|AAC33750.1| DNA polymerase [Spodoptera litura nucleopoly... 46 0.008
pdb|1NOZ|A Chain A, T4 Dna Polymerase Fragment (Residues 1-... 46 0.008
gb|EAJ73956.1| unknown [environmental sequence] 46 0.010
gb|EAD23400.1| unknown [environmental sequence] 46 0.010
ref|XP_222255.3| PREDICTED: similar to DNA polymerase epsil... 46 0.010
ref|XP_543348.2| PREDICTED: similar to DNA polymerase epsil... 46 0.010
gb|EAC15881.1| unknown [environmental sequence] 45 0.013
gb|EAE53973.1| unknown [environmental sequence] 45 0.013
gb|ABM45802.1| DNA polymerase [Spodoptera frugiperda MNPV] 45 0.013
ref|NP_001046939.1| Os02g0511900 [Oryza sativa (japonica cu... 45 0.013
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic s... 45 0.013
gb|EAH64091.1| unknown [environmental sequence] 45 0.017
gb|AAG35631.1| DNA polymerase epsilon [Xenopus laevis] 45 0.017
ref|NP_203396.1| CUN091 putative dnapolymerase, similar to ... 45 0.017
gb|EAC51314.1| unknown [environmental sequence] 45 0.023
gb|EAF35020.1| unknown [environmental sequence] 45 0.023
gb|AAK19171.1|AF292067_1 DNA polymerase [unidentified herpe... 45 0.023
prf||1412173A DNA polymerase 45 0.023
gb|EAA88256.1| unknown [environmental sequence] 44 0.030
gb|EAW54830.1| polymerase (DNA directed), epsilon, isoform ... 44 0.030
gb|EAW54834.1| polymerase (DNA directed), epsilon, isoform ... 44 0.030
gb|EAW54832.1| polymerase (DNA directed), epsilon, isoform ... 44 0.030
gb|EAW54831.1| polymerase (DNA directed), epsilon, isoform ... 44 0.030
ref|YP_803224.1| DNA polymerase [Trichoplusia ni ascovirus ... 44 0.030
dbj|BAD93139.1| DNA polymerase epsilon catalytic subunit va... 44 0.030
gb|AAA15448.1| DNA polymerase epsilon catalytic subunit [Ho... 44 0.030
gb|AAP12650.1| polymerase (DNA directed), epsilon [Homo sap... 44 0.030
gb|AAD44691.1| DNA polymerase epsilon catalytic subunit pro... 44 0.030
gb|AAD44692.1| DNA polymerase epsilon catalytic subunit pro... 44 0.030
gb|AAD44690.1| DNA polymerase epsilon catalytic subunit pro... 44 0.030
ref|NP_006222.2| DNA polymerase epsilon catalytic subunit [... 44 0.030
gb|AAC19148.1| DNA polymerase epsilon, catalytic polypeptid... 44 0.030
pir||G02434 DNA-directed DNA polymerase (EC 2.7.7.7) epsilo... 44 0.030
emb|CAG08538.1| unnamed protein product [Tetraodon nigrovir... 44 0.039
ref|NP_586236.1| DNA POLYMERASE EPSILON [Encephalitozoon cu... 44 0.039
gb|EAA80844.1| unknown [environmental sequence] 44 0.050
gb|EAW48292.1| REV3-like, catalytic subunit of DNA polymera... 44 0.050
ref|YP_717605.1| DNA polymerase [Clanis bilineata nucleopol... 44 0.050
gb|AAL02192.1|AF405581_1 DNA polymerase [unknown phycodnavi... 44 0.050
emb|CAB62529.1| hypothetical protein [Homo sapiens] 44 0.050
ref|XP_627031.1| DNA polymerase epsilon catalytic subunit [... 44 0.050
gb|EAD30622.1| unknown [environmental sequence] 43 0.066
gb|EAU86017.1| hypothetical protein CC1G_11689 [Coprinopsis... 43 0.066
gb|AAC77870.1| putative DNA polymerase epsilon catalytic su... 43 0.066
ref|NP_180280.2| 3'-5' exonuclease/ DNA binding / DNA-direc... 43 0.066
gb|EAB00168.1| unknown [environmental sequence] 43 0.086
gb|EAU86784.1| hypothetical protein CC1G_09909 [Coprinopsis... 43 0.086
ref|YP_667860.1| DNA polymerase [Neodiprion abietis nucleop... 43 0.086
gb|AAF67244.1| DNA polymerase [Leishmania enriettii] 43 0.086
>ref|NP_414602.1| DNA polymerase II [Escherichia coli K12]
ref|AP_000724.1| DNA polymerase II [Escherichia coli W3110]
sp|P21189|DPO2_ECOLI DNA polymerase II (Pol II)
emb|CAA38616.1| DNA polymerase II [Escherichia coli W3110]
gb|AAC73171.1| DNA polymerase II [Escherichia coli K12]
dbj|BAB96628.2| DNA polymerase II [Escherichia coli W3110]
gb|EAY46549.1| DNA-directed DNA polymerase [Escherichia coli B]
prf||1712306B DNA polymerase:ISOTYPE=II
Length = 783
Score = 1614 bits (4179), Expect = 0.0
Identities = 783/783 (100%), Positives = 783/783 (100%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>pdb|1Q8I|A Chain A, Crystal Structure Of Escherichia Coli Dna Polymerase Ii
Length = 783
Score = 1613 bits (4178), Expect = 0.0
Identities = 782/783 (99%), Positives = 783/783 (100%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSI+RTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIVRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00704349.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli HS]
ref|ZP_00718677.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli E110019]
Length = 783
Score = 1613 bits (4176), Expect = 0.0
Identities = 782/783 (99%), Positives = 783/783 (100%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVR+TIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00695826.1| COG0417: DNA polymerase elongation subunit (family B) [Shigella
boydii BS512]
Length = 783
Score = 1612 bits (4175), Expect = 0.0
Identities = 782/783 (99%), Positives = 783/783 (100%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FL+PTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLIPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00715669.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli B7A]
Length = 783
Score = 1611 bits (4172), Expect = 0.0
Identities = 781/783 (99%), Positives = 782/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIE QGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIETQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVR+TIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|YP_406611.1| DNA polymerase II [Shigella boydii Sb227]
gb|ABB64783.1| DNA polymerase II [Shigella boydii Sb227]
Length = 783
Score = 1611 bits (4171), Expect = 0.0
Identities = 782/783 (99%), Positives = 782/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LG ENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGSENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|YP_309096.1| DNA polymerase II [Shigella sonnei Ss046]
gb|AAZ86861.1| DNA polymerase II [Shigella sonnei Ss046]
Length = 783
Score = 1611 bits (4171), Expect = 0.0
Identities = 781/783 (99%), Positives = 782/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQG+
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGK 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPH SPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHTSPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00702429.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli E24377A]
Length = 783
Score = 1609 bits (4167), Expect = 0.0
Identities = 781/783 (99%), Positives = 782/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRP LLEKLNAWFAN+DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00727779.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli E22]
Length = 783
Score = 1608 bits (4163), Expect = 0.0
Identities = 780/783 (99%), Positives = 781/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRP LLEKLNAWFAN+DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGR LVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRVLVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00923866.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli 101-1]
Length = 783
Score = 1607 bits (4162), Expect = 0.0
Identities = 779/783 (99%), Positives = 781/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QG RLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGVRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNG IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>gb|AAA63764.1| DNA polymerase II
Length = 783
Score = 1607 bits (4160), Expect = 0.0
Identities = 780/783 (99%), Positives = 781/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWR+ GFKNGVFFAQAKG LIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWRDDGFKNGVFFAQAKGGLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00709650.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli B171]
Length = 783
Score = 1605 bits (4156), Expect = 0.0
Identities = 779/783 (99%), Positives = 780/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALK FHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKGFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRP LLEKLNAWFAN+DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGR LVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRVLVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|YP_687644.1| DNA polymerase II [Shigella flexneri 5 str. 8401]
gb|ABF02339.1| DNA polymerase II [Shigella flexneri 5 str. 8401]
Length = 783
Score = 1603 bits (4151), Expect = 0.0
Identities = 778/783 (99%), Positives = 781/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFI ADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIHADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRP LLEKLNAWFAN+DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRD+A
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDKA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVR+TIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|NP_706014.1| DNA polymerase II [Shigella flexneri 2a str. 301]
ref|NP_835796.1| DNA polymerase II [Shigella flexneri 2a str. 2457T]
gb|AAN41721.1| DNA polymerase II [Shigella flexneri 2a str. 301]
gb|AAP15601.1| DNA polymerase II [Shigella flexneri 2a str. 2457T]
Length = 783
Score = 1603 bits (4150), Expect = 0.0
Identities = 777/783 (99%), Positives = 781/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFI ADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIHADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRP LLEKLNAWFAN+DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRD+A
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDKA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
+IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 IIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVR+TIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|NP_285756.1| DNA polymerase II [Escherichia coli O157:H7 EDL933]
ref|NP_308091.1| DNA polymerase II [Escherichia coli O157:H7 str. Sakai]
gb|AAG54364.1|AE005183_1 DNA polymerase II [Escherichia coli O157:H7 EDL933]
dbj|BAB33487.1| DNA polymerase II [Escherichia coli O157:H7 str. Sakai]
Length = 783
Score = 1600 bits (4144), Expect = 0.0
Identities = 774/783 (98%), Positives = 778/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHIL+GE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILRGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNG IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRL SSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEA KIGRALVQHVN WWAETLQKQ+LTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQQLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEY RETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYFRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00734354.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli 53638]
Length = 783
Score = 1594 bits (4127), Expect = 0.0
Identities = 771/783 (98%), Positives = 780/783 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQV LAPQESVAFIPADQVPRAQHIL+GE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVFLAPQESVAFIPADQVPRAQHILRGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDM+NG IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMYNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRPQLLEKLNAWFAN+DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPQLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQ+KGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQSKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEG+AQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGIAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAH+EEEAAKIG ALVQHVNAWWAETLQ+QRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHAEEEAAKIGSALVQHVNAWWAETLQQQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|YP_851261.1| DNA polymerase II [Escherichia coli APEC O1]
gb|ABI99546.1| DNA polymerase II [Escherichia coli APEC O1]
Length = 783
Score = 1590 bits (4118), Expect = 0.0
Identities = 771/783 (98%), Positives = 774/783 (98%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPAD VPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADHVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDM NG IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRP LLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPLLLEKLNAWFATHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKN VFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNDVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTK LIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKTLIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELD RLVYRKRLRRPLSEYQRNVPPHVRAARLADEEN KRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDTRLVYRKRLRRPLSEYQRNVPPHVRAARLADEENHKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_00721002.1| COG0417: DNA polymerase elongation subunit (family B) [Escherichia
coli F11]
ref|YP_668000.1| DNA polymerase II [Escherichia coli 536]
gb|ABG68101.1| DNA polymerase II [Escherichia coli 536]
Length = 783
Score = 1589 bits (4115), Expect = 0.0
Identities = 770/783 (98%), Positives = 774/783 (98%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDM NG IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRP LLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPLLLEKLNAWFATHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKN VFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNDVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTK LIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKTLIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVN WWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNVWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELD +LVYRKRLRRPLSEYQRNVPPHVRAARLADEEN KRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDTQLVYRKRLRRPLSEYQRNVPPHVRAARLADEENHKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|NP_752023.1| DNA polymerase II [Escherichia coli CFT073]
gb|AAN78567.1|AE016755_67 DNA polymerase II [Escherichia coli CFT073]
Length = 783
Score = 1586 bits (4106), Expect = 0.0
Identities = 769/783 (98%), Positives = 773/783 (98%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLRE GVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREAGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDM NG IVNARLK HPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMRNGAIVNARLKQHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRP LLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPLLLEKLNAWFATHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQ NKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTK LIEAQGYD
Sbjct: 481 KRQSNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKTLIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELD +LVYRKRLRRPLSEYQRNVPPHVRAARLADEEN KRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDTQLVYRKRLRRPLSEYQRNVPPHVRAARLADEENHKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|YP_539106.1| DNA polymerase II [Escherichia coli UTI89]
gb|ABE05575.1| DNA polymerase II [Escherichia coli UTI89]
Length = 783
Score = 1585 bits (4105), Expect = 0.0
Identities = 770/783 (98%), Positives = 773/783 (98%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSF LATDNGPLQVTLAPQESVAFIPAD VPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFLLATDNGPLQVTLAPQESVAFIPADHVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDM NG IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDAS+LDFELEYVASRP LLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASALDFELEYVASRPLLLEKLNAWFATHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKN VFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNDVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTK LIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKTLIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELD RLVYRKRLRRPLSEYQRNVPPHVRAARLADEEN KRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDTRLVYRKRLRRPLSEYQRNVPPHVRAARLADEENHKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL
Sbjct: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>gb|AAA24406.1| DNA polymerase II
gb|AAA24407.1| DNA polymerase (polB) (gtg start codon)
Length = 768
Score = 1520 bits (3936), Expect = 0.0
Identities = 737/739 (99%), Positives = 737/739 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLE CGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEACGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR
Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL
Sbjct: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
Query: 721 QYQNRGTIKYVWTTNGPEP 739
QYQNRGTIKYVWTT GPEP
Sbjct: 721 QYQNRGTIKYVWTTTGPEP 739
>ref|YP_149443.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gb|AAV76131.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
Length = 783
Score = 1471 bits (3808), Expect = 0.0
Identities = 705/783 (90%), Positives = 740/783 (94%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQ TLAPQESVAFIP Q RA +LQ E
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQATLAPQESVAFIPTSQTSRAASLLQAE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
+ +RLTPL L+DFHRQPV GLYCR HRQLM EK LRE GVTVYEADVRPPERYLMERFI
Sbjct: 61 KDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWV+G+M NG I NARLKPHPDYRPPLKWVS+DIETTRHGELYCIGLEGCGQR VYM
Sbjct: 121 TSPVWVDGEMRNGVIRNARLKPHPDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGP NGD LDFEL YVASRPQLLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPANGDDRQLDFELVYVASRPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQA+GR+IIDGI+ALKSAFWNFSSFSLE V+QEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFA+DKPALATYNLKDCELVT+IFHKTEIM FLLERAT+NG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMSFLLERATING 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPP ASPGGYVMDS+PGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIV+ IWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGH IMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWL+ AHSE +AA+IG LV+HVN WWA+TLQ+Q LTSALELE+ETHFCR
Sbjct: 541 VIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGD QRMVFKGLETVRTDWTPLAQ+FQQELYLR+FRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVRETIDKLMAGELDA+LVYRKRLRRPL EYQRNVPPHVRAARLADE+N K+GRP
Sbjct: 661 PYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVPPHVRAARLADEQNLKQGRPA 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRG IKYVWT NGPEP+DYQ+SPLDYEHYLTRQLQPVAEGILPF+EDNFATL+TGQL
Sbjct: 721 QYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|NP_459102.1| DNA polymerase II [Salmonella typhimurium LT2]
gb|AAL19061.1| DNA polymerase II [Salmonella typhimurium LT2]
Length = 783
Score = 1470 bits (3805), Expect = 0.0
Identities = 704/783 (89%), Positives = 740/783 (94%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGP+Q TLAPQESVAFIP Q RA +LQ E
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQTSRAASLLQAE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
+ +RLTPL L+DFHRQPV GLYCR HRQLM EK LRE GVTVYEADVRPPERYLMERFI
Sbjct: 61 KDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWV+G+M NG I NARLKPH DYRPPLKWVS+DIETTRHGELYCIGLEGCGQR VYM
Sbjct: 121 TSPVWVDGEMRNGVIRNARLKPHSDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGP NGD LDFEL YVASRPQLLEKLNAWFA +DPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPANGDDHQLDFELVYVASRPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQA+GR+IIDGI+ALKSAFWNFSSFSLE V+QEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFA+DKPALATYNLKDCELVT+IFHKTEIMPFLLERAT+NG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATING 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPP ASPGGYVMDS+PGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIV+ IWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGH IMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWL+ AHSE +AA+IG LV+HVN WWA+TLQ+Q LTSALELE+ETHFCR
Sbjct: 541 VIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGD QRMVFKGLETVRTDWTPLAQ+FQQELYLR+FRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVRETIDKLMAGELDA+LVYRKRLRRPL EYQRNVPPHVRAARLADE+N K+GRP
Sbjct: 661 PYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVPPHVRAARLADEQNLKQGRPA 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRG IKYVWT NGPEP+DYQ+SPLDYEHYLTRQLQPVAEGILPF+EDNFATL+TGQL
Sbjct: 721 QYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|NP_454709.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
ref|NP_803984.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Typhi Ty2]
pir||AE0514 DNA polymerase II [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
emb|CAD01253.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Typhi]
gb|AAO67833.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Typhi Ty2]
Length = 783
Score = 1469 bits (3802), Expect = 0.0
Identities = 703/783 (89%), Positives = 740/783 (94%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQ TLAPQESVAFIP Q RA +LQ E
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQATLAPQESVAFIPTSQTSRAASLLQAE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
+ +RLTPL L+DFHRQPV GLYCR HRQLM EK LRE GVTVYEADVRPPERYLMERFI
Sbjct: 61 KDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWV+G+M NG I NARLKPHPDYRPPLKWVS+DIETTRHGELYCIGLEGCGQR VYM
Sbjct: 121 TSPVWVDGEMRNGVIRNARLKPHPDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGP NGD LDFEL YVASRPQLLEKLNAWFA +DPDVIIGWNVVQFDLRMLQK+AERY
Sbjct: 181 LGPANGDERQLDFELVYVASRPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKYAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQA+GR+IIDGI+ALKSAFWNFSSFSLE V+QEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFA+DKPALATYNLKDCELVT+IFHKTEIMPFLLERAT+NG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATING 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGY+APNLGEVPP ASPGGYVMDS+PGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYIAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIV+ IWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGH IMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWL+ AHSE +AA+IG LV+HVN WWA+TLQ+Q LTSALELE+ETHFCR
Sbjct: 541 VIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGD QRMVFKGLETVRTDWTPLAQ+FQQELYLR+FRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVRETIDKLMAGELDA+LVYRKRLRRPL EYQRNVP HVRAARLADE+N K+GRP
Sbjct: 661 PYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVPSHVRAARLADEQNLKQGRPA 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRG IKYVWT NGPEP+DYQ+SPLDYEHYLTRQLQPVAEGILPF+EDNFATL+TGQL
Sbjct: 721 QYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|YP_215079.1| DNA polymerase II [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gb|AAX63998.1| DNA polymerase II and and 3' --> 5' exonuclease [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 783
Score = 1465 bits (3793), Expect = 0.0
Identities = 702/783 (89%), Positives = 738/783 (94%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGP+Q TLAPQESVAFIP Q RA +LQ E
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQTSRAASLLQAE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
+ +RLTPL L+DFHRQPV GLYCR HRQLM EK LRE GVTVYEADVRPPERYLMERFI
Sbjct: 61 KDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWV+G+M NG I NARLKPHPDYRPPLKWVS+DIETTRHGELYCIGLEGCGQR VYM
Sbjct: 121 TSPVWVDGEMRNGVIRNARLKPHPDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGP NGD LDFEL YVASRPQLLEKLNAWFA + PDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPANGDDRQLDFELVYVASRPQLLEKLNAWFAEHAPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
R+PLRLGRDNSELEWREHGFKNGVFFAQA+GR+IIDGI+ALKSAFWNFSSFSLE V+QEL
Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFA+DKPALATYNLKDCELVT+IFHKTEIMPFLLERAT+NG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATING 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPP ASPGGYVMDS+PGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIV+ IWHGRDEA
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEA 480
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQGNKP SQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGH IMRQTKALIEAQGYD
Sbjct: 481 KRQGNKPPSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYD 540
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR 600
VIYGDTDSTFVWL+ AHSE +AA+IG LV+HVN WWA+TLQ+Q LTSALELE+ETHFCR
Sbjct: 541 VIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCR 600
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGADTGSKKRYAGLIQEGD RMVFKGLETVRTDWTPLAQ+FQQELYLR+FRNE
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGDSHRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNE 660
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVRETIDKLMAGELDA+LVYRKRLRRPL EYQRNVPPHVRAARLADE+N K+GRP
Sbjct: 661 PYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVPPHVRAARLADEQNLKQGRPA 720
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQNRG IKYVWT NGPEP+DYQ+SPLDYEHYLTRQLQPVAEGILPF+EDNFATL+TGQL
Sbjct: 721 QYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQL 780
Query: 781 GLF 783
GLF
Sbjct: 781 GLF 783
>ref|ZP_01591264.1| DNA polymerase B, exonuclease [Enterobacter sp. 638]
gb|EAV82485.1| DNA polymerase B, exonuclease [Enterobacter sp. 638]
Length = 820
Score = 1388 bits (3592), Expect = 0.0
Identities = 664/782 (84%), Positives = 716/782 (91%)
Query: 2 AQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQ 61
AQ GF+LTRHWRDTP GTEV FWLATDNGPL VTL PQESV FIP V + + +L+GE
Sbjct: 39 AQEGFLLTRHWRDTPHGTEVEFWLATDNGPLNVTLPPQESVTFIPEQYVEQTKDVLRGEN 98
Query: 62 GFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121
G+R+TPL LKDFHRQPVYGLYCRAHRQLM YEK LRE G+T+YEAD+RPPER+LMERFIT
Sbjct: 99 GWRITPLDLKDFHRQPVYGLYCRAHRQLMRYEKLLREAGITLYEADIRPPERFLMERFIT 158
Query: 122 SPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
+PVWV+G + NARLKP+P YRPPLKWVS+DIETTRHGELYCIGLEGCGQRIVYML
Sbjct: 159 APVWVDGTPQGNRLTNARLKPNPHYRPPLKWVSLDIETTRHGELYCIGLEGCGQRIVYML 218
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDAS LDFELEYV+SRPQLLEKLN WFA +DPDV+IGWNVVQFDLR+LQKHAERYR
Sbjct: 219 GPPNGDASGLDFELEYVSSRPQLLEKLNQWFAKHDPDVLIGWNVVQFDLRVLQKHAERYR 278
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL LGR NSELEWREHGFKNGVFFAQA GRLIIDGIEALKSAFW+FSSFSLE V++ELL
Sbjct: 279 IPLVLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWSFSSFSLEAVSRELL 338
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGKSIDNPWDRMDEIDRRF EDKPALATYNLKDCELVT+IFHKTEIMPFLLERATVNGL
Sbjct: 339 GEGKSIDNPWDRMDEIDRRFHEDKPALATYNLKDCELVTRIFHKTEIMPFLLERATVNGL 398
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
VDRHGGSVAAFGHLY PRMHRAGYVAPNLGEVPP ASPGGYVMDSRPGLYDSVLVLDYK
Sbjct: 399 AVDRHGGSVAAFGHLYIPRMHRAGYVAPNLGEVPPQASPGGYVMDSRPGLYDSVLVLDYK 458
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLVEGMAQPD HSTEGFL A FSREK+CLPEIV+ IW GR+EAK
Sbjct: 459 SLYPSIIRTFLIDPVGLVEGMAQPDEAHSTEGFLGARFSREKNCLPEIVSQIWLGREEAK 518
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R NKPLSQALKIIMNAFYGVLGT+ACRFFDPRLASSITMRGH+IMRQTKAL+E+QGYDV
Sbjct: 519 RHSNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHEIMRQTKALVESQGYDV 578
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRF 601
IYGDTDSTFVWLKGAHSEE+A KIG+ LV VN WW LQK+RLTSALELE+ETHFCRF
Sbjct: 579 IYGDTDSTFVWLKGAHSEEDATKIGKHLVSFVNDWWHNHLQKERLTSALELEFETHFCRF 638
Query: 602 LMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
LMPTIRG + GSKKRYAGLIQE +QRMVFKGLETVRTDWTPLAQQFQQ LYLR+FRNEP
Sbjct: 639 LMPTIRGTEQGSKKRYAGLIQESTEQRMVFKGLETVRTDWTPLAQQFQQTLYLRVFRNEP 698
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+YVRETI LM G+LD++LVYRKRLRRPL EYQRNVPPHVRAARLADEEN +RGR Q
Sbjct: 699 YQDYVRETIASLMDGQLDSQLVYRKRLRRPLEEYQRNVPPHVRAARLADEENVRRGRAPQ 758
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQNRGTIKYVWTT+GPEP+DYQ+SPLDY+HYLTRQL PVA+GILPF++D+FATLMTGQLG
Sbjct: 759 YQNRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTRQLMPVADGILPFVDDDFATLMTGQLG 818
Query: 782 LF 783
LF
Sbjct: 819 LF 820
>ref|ZP_00831663.1| COG0417: DNA polymerase elongation subunit (family B) [Yersinia
frederiksenii ATCC 33641]
Length = 790
Score = 1172 bits (3031), Expect = 0.0
Identities = 568/784 (72%), Positives = 657/784 (83%), Gaps = 5/784 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDT GTEV FWLATD GP QV L PQ SVAFIPA+Q RA+ +L+ E+ ++
Sbjct: 7 GFLLTRHWRDTQAGTEVEFWLATDEGPQQVRLPPQPSVAFIPAEQRQRAETVLRNERRWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PL L DFH++PV GLYC HRQL+ EK LRE GV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLELTDFHQRPVLGLYCSQHRQLIRLEKLLRESGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W G+ + NG ++N+++KP DYRP LK +S+DIET+ +GELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGEENGNGPLLNSQMKPADDYRPTLKLLSLDIETSENGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGDAS---SLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
NG+A+ +LDF+LEYVASRP LLEKLN W A +DPD IIGWN+VQFDLR+LQKHA+RY
Sbjct: 187 PNGNAADEAALDFKLEYVASRPLLLEKLNQWLAEHDPDAIIGWNLVQFDLRVLQKHADRY 246
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
++PLR GR + LEWREHGFK G FFA A GRLIIDGIEALKSA WNF SFSLE+V+Q L
Sbjct: 247 QIPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQTL 306
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGK+ D+P+ RMDEI++RFA DKPALA YNLKDCELVT+IF KTE++ FLLER+TV G
Sbjct: 307 LGEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLERSTVTG 366
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
L DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG+VMDS+PGLYDSVLVLDY
Sbjct: 367 LAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSVLVLDY 426
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLVEGM+QPD +HS GF AWFSREKHCLP IV IW GR+ A
Sbjct: 427 KSLYPSIIRTFLIDPVGLVEGMSQPDEKHSVPGFRGAWFSREKHCLPAIVNQIWQGREAA 486
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH IMRQT+ LIEAQGY
Sbjct: 487 KRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHDIMRQTRELIEAQGYQ 546
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWW-AETLQKQRLTSALELEYETHFC 599
VIYGDTDSTFVWLK AHSE +A++IG+ALVQHVN WW A Q L ALELE+ETH+
Sbjct: 547 VIYGDTDSTFVWLKSAHSETQASRIGKALVQHVNQWWQAHIRQTYDLPCALELEFETHYR 606
Query: 600 RFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
RFLMPTIRGA+ GSKKRYAGLI +M++KGLETVRTDWTPLAQQFQ+ELYLRIF+
Sbjct: 607 RFLMPTIRGAEQGSKKRYAGLISTPTGDQMIYKGLETVRTDWTPLAQQFQRELYLRIFQQ 666
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVR+ + + + GELD +L+YRKRLRR L +YQRNVPPH RAARLADE N+K GRP
Sbjct: 667 QPYQDYVRDYVARTLKGELDEQLIYRKRLRRRLDDYQRNVPPHARAARLADEYNRKLGRP 726
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA+ ILPF+ D+F TL+TGQ
Sbjct: 727 LQYQNGGWISYVMTTAGPEPLEIRQSPIDYDHYLTRQLQPVADAILPFMHDDFTTLITGQ 786
Query: 780 LGLF 783
+GLF
Sbjct: 787 MGLF 790
>ref|ZP_00823781.1| COG0417: DNA polymerase elongation subunit (family B) [Yersinia
bercovieri ATCC 43970]
Length = 790
Score = 1170 bits (3027), Expect = 0.0
Identities = 570/784 (72%), Positives = 648/784 (82%), Gaps = 5/784 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDT GTEV FWLATD GP V L PQ SVAFIPA+Q R + +L+ E+ ++
Sbjct: 7 GFLLTRHWRDTQAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQRQRVETLLRDERRWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PL L DFH +PV GLYC HRQL+ EK LRE GV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLELTDFHHRPVLGLYCTQHRQLIRLEKLLRESGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W GD + NG ++N ++KP +YRP LK +S+DIET+ HGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGDENGNGPLLNTQMKPADNYRPALKLLSLDIETSEHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGD---ASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
NGD +++LDF LEYVASRP LLEKLN W YDPD IIGWN+VQFDLR+LQKHA+RY
Sbjct: 187 PNGDDAESAALDFNLEYVASRPLLLEKLNQWLERYDPDAIIGWNLVQFDLRVLQKHADRY 246
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
++PLR GR S LEWREHGFK G FFA A GRLIIDGIEALKSA WNF SFSLE+V+Q L
Sbjct: 247 QIPLRFGRGGSLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQTL 306
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGK+ DNP+ RMDEI+ RFA DKPALA YNLKDCELVT+IF KTE++ FLLERATV G
Sbjct: 307 LGEGKASDNPYQRMDEINHRFANDKPALARYNLKDCELVTRIFAKTELLSFLLERATVTG 366
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
L DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG+VMDSRPGLYDSVLVLDY
Sbjct: 367 LAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSRPGLYDSVLVLDY 426
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLV GM QPD EHS GF AWFSREKHCLP IV IW GR+ A
Sbjct: 427 KSLYPSIIRTFLIDPVGLVAGMQQPDDEHSVPGFRGAWFSREKHCLPAIVNQIWQGREAA 486
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMRQT+ LIEAQGY
Sbjct: 487 KRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQGYQ 546
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFC 599
VIYGDTDSTFVWLK AHSE +AA+IG+ LVQHVN WW + Q L ALELE+ETH+
Sbjct: 547 VIYGDTDSTFVWLKNAHSEAQAARIGKELVQHVNQWWQNHIRQTFNLPCALELEFETHYR 606
Query: 600 RFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
RFLMPTIRGA+ GSKKRYAGLI +MV+KGLETVRTDWTPLAQQFQ+ELYL IF+
Sbjct: 607 RFLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELYLLIFQQ 666
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVR+ + + + GELD +L+YRKRLRR L +YQRNVPPH RAARLADE N+K+GRP
Sbjct: 667 QPYQDYVRDYVARTLNGELDEQLIYRKRLRRRLDDYQRNVPPHARAARLADEFNRKQGRP 726
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA+ ILPF+ D+F TL+TGQ
Sbjct: 727 LQYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFMHDDFTTLITGQ 786
Query: 780 LGLF 783
+GLF
Sbjct: 787 MGLF 790
>ref|YP_051940.1| DNA polymerase II [Erwinia carotovora subsp. atroseptica SCRI1043]
emb|CAG76750.1| DNA polymerase II [Erwinia carotovora subsp. atroseptica SCRI1043]
Length = 788
Score = 1169 bits (3023), Expect = 0.0
Identities = 565/782 (72%), Positives = 648/782 (82%), Gaps = 3/782 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHW DTP GT+V FWLATD GPL L QE++AFIPA Q A+ +LQ E+ ++
Sbjct: 7 GFLLTRHWNDTPAGTQVEFWLATDEGPLLARLPVQEAIAFIPAQQEALARTLLQQEKRWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLA++DFH QP+ GLYC +RQL+ EK LREGGV VYEAD+RPPER+LMERFIT+PV
Sbjct: 67 LKPLAMQDFHHQPLLGLYCPQYRQLLRLEKLLREGGVQVYEADIRPPERFLMERFITAPV 126
Query: 125 WVEGD-MHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W+ G + + AR+KP+PDYRP L+ VS+DIET RHGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WLNGTPTSDNLLTQARMKPNPDYRPTLRLVSLDIETNRHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGDASSLD-FELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRL 242
NG + D F LEYVASRP LLEKLN W +DPD IIGWN+VQFDLR+LQKHAERY +
Sbjct: 187 PNGTPAEHDNFNLEYVASRPLLLEKLNTWMQQHDPDAIIGWNLVQFDLRVLQKHAERYHI 246
Query: 243 PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLG 302
PL+LGR+ LEWREHGFK G FFA A GRLIIDGIEALKSA WNF+SFSLE VAQ LLG
Sbjct: 247 PLKLGRNGQALEWREHGFKQGHFFASATGRLIIDGIEALKSATWNFASFSLEFVAQSLLG 306
Query: 303 EGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLP 362
EGK+ID P+ RMDEIDRRFAEDKPALA YNL+DCELVT+IF KTE++PFLLERA+V GL
Sbjct: 307 EGKAIDTPYQRMDEIDRRFAEDKPALARYNLQDCELVTRIFDKTELLPFLLERASVTGLA 366
Query: 363 VDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKS 422
DR GGSVAAF HLY PRMHR GYVAPNLGEV ASPGG+VMDSRPGLYDSVLVLDYKS
Sbjct: 367 ADRSGGSVAAFSHLYLPRMHRMGYVAPNLGEVALEASPGGFVMDSRPGLYDSVLVLDYKS 426
Query: 423 LYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKR 482
LYPSIIRTFLIDPVGL G PD +H+ GF AWFSRE+HCLP IV IW GR+ AKR
Sbjct: 427 LYPSIIRTFLIDPVGLAVGTQNPDAQHAVSGFRGAWFSREQHCLPAIVEQIWQGREAAKR 486
Query: 483 QGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVI 542
NKPLSQALKIIMNAFYGVLG T CRFFDPRLASSIT+RGH+IMR+T+ LIE QGY VI
Sbjct: 487 TNNKPLSQALKIIMNAFYGVLGATGCRFFDPRLASSITLRGHEIMRKTRELIEEQGYQVI 546
Query: 543 YGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQ-KQRLTSALELEYETHFCRF 601
YGDTDSTFVWLK AHSEEEAAKIG++LVQHVN WW + LQ Q+LTSALELE+ETHF RF
Sbjct: 547 YGDTDSTFVWLKHAHSEEEAAKIGKSLVQHVNQWWTQHLQDTQQLTSALELEFETHFRRF 606
Query: 602 LMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
LMPTIRGA+ GSKKRYAGLI ++MVFKGLETVRTDWTPLAQQFQQ+LYL IF+ +P
Sbjct: 607 LMPTIRGAEQGSKKRYAGLIDTPQGEKMVFKGLETVRTDWTPLAQQFQQQLYLLIFQQQP 666
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+++R+ +D + G+ D L+YRKRLRR L +YQRNVPPH RAA++AD+ N+++GRPLQ
Sbjct: 667 YQDWLRDYVDHTLNGDFDDLLIYRKRLRRKLDDYQRNVPPHARAAKIADDYNRQQGRPLQ 726
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQN G I YV T NGPEPL+ + SPLDY+HY+ RQLQPVA+ ILPF+ D+FATL+TGQ+G
Sbjct: 727 YQNGGWISYVMTVNGPEPLETRHSPLDYQHYVERQLQPVADAILPFLHDDFATLVTGQMG 786
Query: 782 LF 783
LF
Sbjct: 787 LF 788
>ref|ZP_01497924.1| hypothetical protein YpseI_02003097 [Yersinia pseudotuberculosis IP
31758]
Length = 789
Score = 1167 bits (3018), Expect = 0.0
Identities = 568/783 (72%), Positives = 650/783 (83%), Gaps = 4/783 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV FWLATD GP V L PQ SVAFIPA+Q RA+ +L+ E+ ++
Sbjct: 7 GFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQQQRAETVLRAERHWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL DFHR+PV GLYC HRQL+ EKRLRE GV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLALTDFHRRPVLGLYCTQHRQLIRLEKRLRESGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEGDMHN-GTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W G ++ G ++N +LKP DYRP LK VS+DIET+ HGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGQENDHGPLLNTQLKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGDASS--LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
NG+ + LDF LEYVASRP LLEKLN W A +DPD IIGWN+VQFDLR+LQKHA+RY+
Sbjct: 187 PNGETTGTPLDFNLEYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQKHADRYQ 246
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLR GR + LEWREHGFK G FFA A GRLIIDGIEALKSA WNF SFSLE+V+Q LL
Sbjct: 247 IPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQTLL 306
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ D+P+ RMDEI++RFA DKPALA YNLKDCELVT+IF KTE++ FLLER+TV GL
Sbjct: 307 GEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLERSTVTGL 366
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG+VMDS+PGLYDSVLVLDYK
Sbjct: 367 AADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSVLVLDYK 426
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLV GM QPD +HS GF AWFSREKHCLP IV IW GR+ AK
Sbjct: 427 SLYPSIIRTFLIDPVGLVAGMQQPDIQHSVPGFRGAWFSREKHCLPAIVNQIWQGREAAK 486
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
RQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMRQT+ LIEAQGY V
Sbjct: 487 RQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQGYQV 546
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWLK AH++E+A +IG LVQ VN WW +Q+ L ALELE+E H+ R
Sbjct: 547 IYGDTDSTFVWLKSAHNDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEFEIHYRR 606
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGA+ GSKKRYAGLI +MV+KGLETVRTDWTPLAQQFQ+ELYLRIF+ +
Sbjct: 607 FLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELYLRIFQQQ 666
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVR+ + + + GELD +LVYRKRLRR L +YQRNVPPH RAARLADE N+K GRPL
Sbjct: 667 PYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDDYQRNVPPHARAARLADEFNRKLGRPL 726
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA+ ILPF +D+F TL+TGQ+
Sbjct: 727 QYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFTQDDFTTLITGQM 786
Query: 781 GLF 783
GLF
Sbjct: 787 GLF 789
>ref|YP_069201.1| DNA polymerase II [Yersinia pseudotuberculosis IP 32953]
emb|CAH19899.1| DNA polymerase II and and 3'--> 5' exonuclease [Yersinia
pseudotuberculosis IP 32953]
Length = 789
Score = 1166 bits (3017), Expect = 0.0
Identities = 568/783 (72%), Positives = 650/783 (83%), Gaps = 4/783 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV FWLATD GP V L PQ SVAFIPA+Q RA+ +L+ E+ ++
Sbjct: 7 GFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQQQRAETVLRAERHWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL DFH++PV GLYC HRQL+ EKRLRE GV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLALTDFHQRPVLGLYCTQHRQLIRLEKRLRESGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEGDMHN-GTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W G ++ G ++N +LKP DYRP LK VS+DIET+ HGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGQENDHGPLLNTQLKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGDASS--LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
NG+ + LDF LEYVASRP LLEKLN W A +DPD IIGWN+VQFDLR+LQKHA+RY+
Sbjct: 187 PNGETTGTPLDFNLEYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQKHADRYQ 246
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLR GR + LEWREHGFK G FFA A GRLIIDGIEALKSA WNF SFSLE+V+Q LL
Sbjct: 247 IPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQTLL 306
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ D+P+ RMDEI++RFA DKPALA YNLKDCELVT+IF KTE++ FLLER+TV GL
Sbjct: 307 GEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLERSTVTGL 366
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG+VMDS+PGLYDSVLVLDYK
Sbjct: 367 AADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSVLVLDYK 426
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLV GM QPD +HS GF AWFSREKHCLP IV IW GR+ AK
Sbjct: 427 SLYPSIIRTFLIDPVGLVAGMQQPDIQHSVPGFRGAWFSREKHCLPAIVNQIWQGREAAK 486
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
RQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMRQT+ LIEAQGY V
Sbjct: 487 RQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQGYQV 546
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWLK AHS+E+A +IG LVQ VN WW +Q+ L ALELE+E H+ R
Sbjct: 547 IYGDTDSTFVWLKSAHSDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEFEIHYRR 606
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGA+ GSKKRYAGLI +MV+KGLETVRTDWTPLAQQFQ+ELYLRIF+ +
Sbjct: 607 FLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELYLRIFQQQ 666
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVR+ + + + GELD +LVYRKRLRR L +YQRNVPPH RAARLADE N+K GRPL
Sbjct: 667 PYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDDYQRNVPPHARAARLADEFNRKLGRPL 726
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA+ ILPF +D+F TL+TGQ+
Sbjct: 727 QYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFTQDDFTTLITGQM 786
Query: 781 GLF 783
GLF
Sbjct: 787 GLF 789
>ref|NP_404162.1| DNA polymerase II [Yersinia pestis CO92]
ref|NP_670952.1| DNA polymerase II [Yersinia pestis KIM]
ref|NP_994932.1| DNA polymerase II [Yersinia pestis biovar Microtus str. 91001]
ref|ZP_00795624.1| COG0417: DNA polymerase elongation subunit (family B) [Yersinia
pestis Angola]
ref|ZP_01177309.1| COG0417: DNA polymerase elongation subunit (family B) [Yersinia
pestis biovar Orientalis str. IP275]
ref|YP_653484.1| DNA polymerase II [Yersinia pestis Antiqua]
ref|YP_646325.1| DNA polymerase II [Yersinia pestis Nepal516]
gb|AAM87203.1|AE013968_5 DNA polymerase II [Yersinia pestis KIM]
gb|AAS63809.1| DNA polymerase II [Yersinia pestis biovar Microtus str. 91001]
gb|ABG16725.1| DNA polymerase II [Yersinia pestis Nepal516]
gb|ABG15539.1| DNA polymerase II [Yersinia pestis Antiqua]
emb|CAL19199.1| DNA polymerase II [Yersinia pestis CO92]
Length = 789
Score = 1165 bits (3014), Expect = 0.0
Identities = 567/783 (72%), Positives = 650/783 (83%), Gaps = 4/783 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV FWLATD GP V L PQ SVAFIPA+Q RA+ +L+ E+ ++
Sbjct: 7 GFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQQQRAETVLRAERHWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL DFH++PV GLYC HRQL+ EKRLRE GV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLALTDFHQRPVLGLYCTQHRQLIRLEKRLRESGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEGDMHN-GTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W G ++ G ++N +LKP DYRP LK VS+DIET+ HGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGQENDHGPLLNTQLKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGDASS--LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
NG+ + LDF LEYVASRP LLEKLN W A +DPD IIGWN+VQFDLR+LQKHA+RY+
Sbjct: 187 PNGETTGTPLDFNLEYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQKHADRYQ 246
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLR GR + LEWREHGFK G FFA A GRLIIDGIEALKSA WNF SFSLE+V+Q LL
Sbjct: 247 IPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQTLL 306
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ D+P+ RMDEI++RFA DKPALA YNLKDCELVT+IF KTE++ FLLER+TV GL
Sbjct: 307 GEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLERSTVTGL 366
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG+VMDS+PGLYDSVLVLDYK
Sbjct: 367 AADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSVLVLDYK 426
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLV GM QPD +HS GF AWFSREKHCLP IV IW GR+ AK
Sbjct: 427 SLYPSIIRTFLIDPVGLVAGMQQPDIQHSVPGFRGAWFSREKHCLPAIVNQIWQGREAAK 486
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
RQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMRQT+ LIEAQGY V
Sbjct: 487 RQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQGYQV 546
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWLK AH++E+A +IG LVQ VN WW +Q+ L ALELE+E H+ R
Sbjct: 547 IYGDTDSTFVWLKSAHNDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEFEIHYRR 606
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
FLMPTIRGA+ GSKKRYAGLI +MV+KGLETVRTDWTPLAQQFQ+ELYLRIF+ +
Sbjct: 607 FLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELYLRIFQQQ 666
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PYQ+YVR+ + + + GELD +LVYRKRLRR L +YQRNVPPH RAARLADE N+K GRPL
Sbjct: 667 PYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDDYQRNVPPHARAARLADEFNRKLGRPL 726
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA+ ILPF +D+F TL+TGQ+
Sbjct: 727 QYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFTQDDFTTLITGQM 786
Query: 781 GLF 783
GLF
Sbjct: 787 GLF 789
>ref|ZP_00825741.1| COG0417: DNA polymerase elongation subunit (family B) [Yersinia
mollaretii ATCC 43969]
Length = 808
Score = 1165 bits (3013), Expect = 0.0
Identities = 570/802 (71%), Positives = 652/802 (81%), Gaps = 23/802 (2%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDT GTEV FWLATD GP V L PQ SVAFIPA+Q RA+ +L E+ ++
Sbjct: 7 GFLLTRHWRDTQAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQRQRAETLLCDERRWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PL L DFH++PV GLYC HRQL+ EK LREGGV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLELTDFHQRPVLGLYCTQHRQLIRLEKLLREGGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEG-DMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W G D NG ++N ++KP +YRP LK +S+DIET+ HGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGEDNGNGPLLNTQMKPAEEYRPTLKLLSLDIETSEHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENGD---------------------ASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIG 222
NGD +++LDF LEYVASRP LLEKLN W YDPD IIG
Sbjct: 187 PNGDDAGSGNSAGSGNSAGSGNSAKSAALDFNLEYVASRPLLLEKLNQWLERYDPDAIIG 246
Query: 223 WNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALK 282
WN+VQFDLR+LQKHA+RY++PLR GR + LEWREHGFK G FFA A GRLIIDGIEALK
Sbjct: 247 WNLVQFDLRVLQKHADRYQIPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALK 306
Query: 283 SAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQI 342
SA WNF SFSLE+V+Q LLGEGK+ DNP+ RMDEI+ RFA DKPALA YNLKDCELVT+I
Sbjct: 307 SATWNFPSFSLESVSQTLLGEGKASDNPYQRMDEINHRFANDKPALARYNLKDCELVTRI 366
Query: 343 FHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGG 402
F KTE++ FLLER+TV GL DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG
Sbjct: 367 FAKTELLSFLLERSTVTGLAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGG 426
Query: 403 YVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSRE 462
+VMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLV GM QPD EHS GF AWFSRE
Sbjct: 427 FVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVAGMQQPDDEHSVPGFRGAWFSRE 486
Query: 463 KHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMR 522
KHCLP IV IW GR+ AKRQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+R
Sbjct: 487 KHCLPAIVNQIWQGREAAKRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLR 546
Query: 523 GHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQ 582
GH+IMRQT+ LIEAQGY VIYGDTDSTFVWLK AHSE +A++IG+ LVQHVN WW ++
Sbjct: 547 GHEIMRQTRELIEAQGYQVIYGDTDSTFVWLKNAHSEAQASRIGKELVQHVNQWWQNHIR 606
Query: 583 KQ-RLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDW 641
+ L ALELE+ETH+ RFLMPTIRGA+ GSKKRYAGLI +MV+KGLETVRTDW
Sbjct: 607 ETFNLPCALELEFETHYRRFLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDW 666
Query: 642 TPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPP 701
TPLAQQFQ+ELYLRIF+ +PYQ+YVR+ + + + GELD +L+YRKRLRR L EYQRNVPP
Sbjct: 667 TPLAQQFQRELYLRIFQQQPYQDYVRDYVARTLNGELDEQLIYRKRLRRRLEEYQRNVPP 726
Query: 702 HVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVA 761
HVRAARLADE N+++GRPLQYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA
Sbjct: 727 HVRAARLADEFNRQQGRPLQYQNGGWISYVITTAGPEPLETRQSPIDYDHYLTRQLQPVA 786
Query: 762 EGILPFIEDNFATLMTGQLGLF 783
+ ILPF+ D+F TL+TGQ+GLF
Sbjct: 787 DAILPFMHDDFTTLITGQMGLF 808
>ref|YP_001004989.1| DNA polymerase II [Yersinia enterocolitica subsp. enterocolitica
8081]
emb|CAL10749.1| DNA polymerase II [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 790
Score = 1161 bits (3004), Expect = 0.0
Identities = 564/784 (71%), Positives = 652/784 (83%), Gaps = 5/784 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDT GTEV FWLATD GP QV L PQ SVAFIPA+Q RA+ +L+ E+ ++
Sbjct: 7 GFLLTRHWRDTQAGTEVEFWLATDEGPQQVRLPPQPSVAFIPAEQRQRAETVLRDERRWQ 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PL L DFH++PV GLYC HRQL+ EK L+E GV VYE D+RPPER+LMERFIT+PV
Sbjct: 67 LRPLELTDFHQRPVLGLYCNQHRQLIRLEKLLKESGVNVYEGDIRPPERFLMERFITAPV 126
Query: 125 WVEG-DMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
W G D NG ++N ++KP DYRP LK VS+DIET+ HGELYCIGLEGCGQR VYMLGP
Sbjct: 127 WFSGEDNGNGPLLNTQMKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQVYMLGP 186
Query: 184 ENG---DASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
NG D ++LDF LEYVASRP LLEKLN W +DPD IIGWN+VQFDLR+LQKHA+RY
Sbjct: 187 PNGNQADETALDFNLEYVASRPLLLEKLNQWLELHDPDAIIGWNLVQFDLRVLQKHADRY 246
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
++PLR GR + LEWREHGFK G FFA A GRLIIDGIEALKSA WNF SFSLE+V+Q L
Sbjct: 247 QIPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQTL 306
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGK+ D+P+ RMDEI++RFA DKPALA YNLKDCELVT+IF KTE++ FLLERATV G
Sbjct: 307 LGEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLERATVTG 366
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
L DR GGSVAAF HLY PRMHR GYVAPNLGE+P SPGG+VMDS+PGLYDSVLVLDY
Sbjct: 367 LAADRSGGSVAAFTHLYMPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSVLVLDY 426
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGLV GM+QPD +H+ GF AWFSREKHCLP IV IW GR+ A
Sbjct: 427 KSLYPSIIRTFLIDPVGLVVGMSQPDEQHAVPGFRGAWFSREKHCLPAIVNQIWQGREAA 486
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQ NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGH+IMR+T+ LIEA+GY
Sbjct: 487 KRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRKTRELIEARGYQ 546
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFC 599
VIYGDTDSTFVWLK AHSEE+AA IG+ LVQ+VN WW +++ L ALELE+ETH+
Sbjct: 547 VIYGDTDSTFVWLKNAHSEEQAASIGQELVQYVNQWWQTHIRETFDLPCALELEFETHYR 606
Query: 600 RFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
RFLMPTIRGA+ GSKKRYAGLI +M++KGLETVRTDWTPLAQQFQ+ELYL+IF+
Sbjct: 607 RFLMPTIRGAEQGSKKRYAGLISTPTGDQMIYKGLETVRTDWTPLAQQFQRELYLKIFQQ 666
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVR+ + + + GELD +L+YRKRLRR L +YQRNVPPH RAARLADE N+K GRP
Sbjct: 667 QPYQDYVRDYVARTLNGELDEQLIYRKRLRRRLDDYQRNVPPHARAARLADEFNRKLGRP 726
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQN G I YV TT GPEPL+ ++SP+DY+HYLTRQLQPVA+ ILPF+ D+F TL+TGQ
Sbjct: 727 LQYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFMHDDFTTLITGQ 786
Query: 780 LGLF 783
+GLF
Sbjct: 787 MGLF 790
>ref|ZP_01536922.1| DNA polymerase B, exonuclease [Serratia proteamaculans 568]
gb|EAV31078.1| DNA polymerase B, exonuclease [Serratia proteamaculans 568]
Length = 787
Score = 1144 bits (2958), Expect = 0.0
Identities = 557/784 (71%), Positives = 643/784 (82%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHWRDTP GTEV FWLATD+GP Q+ LAPQ SVAFIPA+Q R + +L+ E+
Sbjct: 4 QQGFLLTRHWRDTPAGTEVEFWLATDSGPQQLRLAPQTSVAFIPAEQRQRTELLLREERQ 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
+ L PL L DFH +PV GLYCR HRQL+ E+ L++GGV +YEAD+RPPERYLMERFIT+
Sbjct: 64 WELKPLPLTDFHHRPVLGLYCRQHRQLIKLERLLKDGGVNLYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PVW G + NG ++N ++KP P+YRP LK VS+DIETT HGELY I LEGCGQR VYML
Sbjct: 124 PVWFSGQANGNGPLINGQMKPAPEYRPTLKLVSLDIETTAHGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NG +LDF+LEY SRPQ+LE+LN W +DPD IIGWN+VQFDLR+LQKHAERY+
Sbjct: 184 GPANGGNEALDFDLEYCVSRPQMLERLNQWLERHDPDAIIGWNLVQFDLRVLQKHAERYQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL+LGR + LEWREHGFK FFA A GRLIIDGIEALKSA WNF SFSLE V+Q LL
Sbjct: 244 IPLKLGRGGNLLEWREHGFKQNHFFASAAGRLIIDGIEALKSATWNFPSFSLEHVSQTLL 303
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGKSIDNP+ RM EIDRRFAEDKPALA YNLKDCELVTQIF KT+++ FLLERATV GL
Sbjct: 304 GEGKSIDNPYQRMAEIDRRFAEDKPALARYNLKDCELVTQIFAKTDLLTFLLERATVTGL 363
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF +LY PRMHR G+VAPNLGE P SPGG+VMDS+PGLYDSVLVLDYK
Sbjct: 364 AADRSGGSVAAFSNLYMPRMHRLGFVAPNLGEQPEEHSPGGFVMDSQPGLYDSVLVLDYK 423
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLVEGM P S GF A FSR KHCLP IV IW GR+ AK
Sbjct: 424 SLYPSIIRTFLIDPVGLVEGMQHPGDADSVPGFRHARFSRSKHCLPAIVEQIWQGREAAK 483
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
RQ NK LSQALKIIMNA YGVLG++ CRFFDPRLASSIT+RGH+IMRQT+ LIEAQGY V
Sbjct: 484 RQQNKALSQALKIIMNALYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQGYQV 543
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWLK H E++AA+IGR LV+ VN WW + LQ+Q L +ALELE+ETH+ R
Sbjct: 544 IYGDTDSTFVWLKQPHDEQQAAQIGRTLVEQVNQWWQQHLQQQYGLENALELEFETHYSR 603
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRGA+ GSKKRYAGLI + D + MV+KGLETVRTDWTPLAQQFQQ+LY RIF+
Sbjct: 604 FLMPTIRGAEQGSKKRYAGLIAKPDGSEEMVYKGLETVRTDWTPLAQQFQQQLYQRIFKR 663
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ++VRE + + + G+ D RLVYRKRLRR L EYQRNVPPHVRAAR+AD+ N+++GRP
Sbjct: 664 QPYQDFVREYVSQTLNGDFDDRLVYRKRLRRKLDEYQRNVPPHVRAARIADDYNRQQGRP 723
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQN G I YV T GPEPL+ Q+S +DY HYL RQL+PVA+ ILPF+ D+F TL+TGQ
Sbjct: 724 LQYQNGGWISYVMTVAGPEPLETQQSAIDYPHYLERQLEPVADAILPFLHDDFTTLVTGQ 783
Query: 780 LGLF 783
+GLF
Sbjct: 784 MGLF 787
>ref|ZP_01508998.1| DNA polymerase B, exonuclease [Burkholderia phytofirmans PsJN]
gb|EAV06693.1| DNA polymerase B, exonuclease [Burkholderia phytofirmans PsJN]
Length = 855
Score = 1123 bits (2906), Expect = 0.0
Identities = 551/787 (70%), Positives = 638/787 (81%), Gaps = 6/787 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDTP GTEV FWLATD GP V L PQ SVAFIPA+ RA+ IL+ E
Sbjct: 69 EQGFILTRHWRDTPAGTEVDFWLATDGGPRHVRLRPQPSVAFIPAEHRERAETILRREAP 128
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L L L+DF +PV GLYC +RQL +EKRL++GGV VYEAD+ PPERY+MERFIT+
Sbjct: 129 LDLRALDLRDFQHRPVMGLYCPQYRQLTGFEKRLKQGGVDVYEADIFPPERYMMERFITA 188
Query: 123 PVWVEGDMHN----GTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIV 178
PVW GD + G +VN+ LKP YRPPLK VS+DIET+ H ELY I LEGCGQR V
Sbjct: 189 PVWFSGDAQSNGKSGPLVNSELKPATGYRPPLKLVSLDIETSAHAELYSIALEGCGQRQV 248
Query: 179 YMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAE 238
YMLGP NG+A +LDF+LEY +R QLLEKLNAW +DPD IIGWN+VQFDLR+LQ+HAE
Sbjct: 249 YMLGPPNGEAGTLDFDLEYCETRAQLLEKLNAWLERHDPDAIIGWNLVQFDLRVLQQHAE 308
Query: 239 RYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQ 298
+YR+PLRLGR + +EWREHG K FFA A GRLIIDGIEAL+SA W+F SFSLE V++
Sbjct: 309 QYRVPLRLGRGGAVMEWREHGLKQNHFFAAAAGRLIIDGIEALRSATWSFPSFSLEHVSR 368
Query: 299 ELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATV 358
+LGEGK+IDNP+ RMDEI RRF EDKPALA YNLKDCELVT+IF KTE++PFLLERA+V
Sbjct: 369 TVLGEGKAIDNPYQRMDEIQRRFDEDKPALARYNLKDCELVTRIFAKTELLPFLLERASV 428
Query: 359 NGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVL 418
GLP DR GGSVAAF HLY PRMHR GYVAPNLG+V ASPGG+VMDSRPGLYDSVLVL
Sbjct: 429 TGLPADRSGGSVAAFTHLYMPRMHRQGYVAPNLGDVAGAASPGGFVMDSRPGLYDSVLVL 488
Query: 419 DYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRD 478
DYKSLYPSIIRTFLIDPVGLVEGM P + S GFL A FSR +HCLP IV +W GR+
Sbjct: 489 DYKSLYPSIIRTFLIDPVGLVEGMLNPADDQSVPGFLGARFSRTRHCLPSIVGQVWQGRE 548
Query: 479 EAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQG 538
AKR+ NKPLSQALKIIMNAFYGVLG+T CRFFDPRLASSITMRGH+IM T+ LI+ +G
Sbjct: 549 TAKRENNKPLSQALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGHEIMHATRELIQGEG 608
Query: 539 YDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETH 597
Y+VIYGDTDSTFVWLK AHSEE+A++IGRALV+H+NAWW + LQ++ L SALEL++E H
Sbjct: 609 YEVIYGDTDSTFVWLKHAHSEEDASRIGRALVEHINAWWRQNLQERFGLDSALELQFERH 668
Query: 598 FCRFLMPTIRGADTGSKKRYAGL-IQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRI 656
+ RF MPTIRGA+ GSKKRYAGL I + +V+KGLETVRTDWTPLAQQFQQELY RI
Sbjct: 669 YRRFFMPTIRGAEEGSKKRYAGLTILPDGSEDIVYKGLETVRTDWTPLAQQFQQELYRRI 728
Query: 657 FRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKR 716
F +PYQ+YVR+ + + G+LD +LVYRKRLRRPL EY+RNVPPHVRAAR+ADE N+++
Sbjct: 729 FTQQPYQDYVRDYVRDTLDGKLDDQLVYRKRLRRPLEEYERNVPPHVRAARVADEFNRRQ 788
Query: 717 GRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLM 776
GRPLQYQN G I YV T GPEPL+ RS +DYEHYLTRQLQPVA+ ILP + D+F TLM
Sbjct: 789 GRPLQYQNGGWISYVMTVAGPEPLETLRSAIDYEHYLTRQLQPVADAILPLLRDDFTTLM 848
Query: 777 TGQLGLF 783
+GQ LF
Sbjct: 849 SGQKQLF 855
>ref|ZP_01296195.1| hypothetical protein PaerP_01001956 [Pseudomonas aeruginosa PA7]
Length = 788
Score = 1118 bits (2893), Expect = 0.0
Identities = 545/782 (69%), Positives = 643/782 (82%), Gaps = 3/782 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV+FWLATD+GP V L PQ SVAF+P +Q R + +L GE G
Sbjct: 7 GFVLTRHWRDTPAGTEVAFWLATDHGPRHVRLPPQPSVAFVPVEQRVRVETLLAGESGAE 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL+DF ++PV GLYC+ HRQLMN EKRLR+ GV V+EAD+RPPERYLMERFIT+PV
Sbjct: 67 LRPLALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAPV 126
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
+E + +G+++ RLKP PDYRP L+ VS+DIET G+LY I LEGCGQR VYMLGP
Sbjct: 127 SLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIETNARGDLYSIALEGCGQRQVYMLGP 186
Query: 184 ENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLP 243
NGDAS++DF L+Y SR LLE+LN W A +DPD IIGWN+VQFDLR+L +HA+R ++P
Sbjct: 187 ANGDASAVDFRLDYCDSRAGLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHAQRLKVP 246
Query: 244 LRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGE 303
LRLGR E+ WREHG +N +FA A GRLIIDGIEAL+SA W+F SFSLE VA+ LLGE
Sbjct: 247 LRLGRGGDEMGWREHGSRNNHYFAAAAGRLIIDGIEALRSATWSFPSFSLENVARTLLGE 306
Query: 304 GKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPV 363
GK+IDNP+ RMDEIDR FAEDKPALA YNLKDCELVT+IF +TE++ FLLERATV GLP
Sbjct: 307 GKAIDNPYQRMDEIDRMFAEDKPALARYNLKDCELVTRIFARTELLDFLLERATVTGLPA 366
Query: 364 DRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSL 423
DR GGSVAAF HLY P MHRAG+VAPNLGE P ASPGG+VMDSRPGLY+SVLVLDYKSL
Sbjct: 367 DRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKSL 426
Query: 424 YPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQ 483
YPSIIRTFLIDPVGLVEG+ QPD EHS EGF A FSR +HCLP IV +W GR+ AKR+
Sbjct: 427 YPSIIRTFLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRE 486
Query: 484 GNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIY 543
N+PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMR+T+ LIEA+GY VIY
Sbjct: 487 RNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIY 546
Query: 544 GDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCRFL 602
GDTDSTFVWL H+EEEAA IGRALV VN WW E L+++ L SALEL++ETH+ RFL
Sbjct: 547 GDTDSTFVWLGSPHAEEEAAAIGRALVARVNDWWREHLKEEFGLASALELQFETHYRRFL 606
Query: 603 MPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
MPT+RGA+ GSKKRYAGL++ D + MVFKGLETVRTDW+PLAQ+FQQELYLRIF +P
Sbjct: 607 MPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQP 666
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+YVR+ + + +AGELD LVYRKRLRR L +YQRNVPPHVRAAR+AD+ N +RGRP Q
Sbjct: 667 YQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLQRGRPRQ 726
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQ+ G I YV GPEPL+ +RS +DYEHY+ +QLQPVA+ ILPF+ D+FATL+ Q+
Sbjct: 727 YQSGGWISYVIGVAGPEPLEARRSAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMA 786
Query: 782 LF 783
LF
Sbjct: 787 LF 788
>ref|YP_554375.1| DNA polymerase II [Burkholderia xenovorans LB400]
gb|ABE35025.1| DNA polymerase II [Burkholderia xenovorans LB400]
Length = 816
Score = 1117 bits (2889), Expect = 0.0
Identities = 542/787 (68%), Positives = 635/787 (80%), Gaps = 6/787 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDTP GTEV FWLATD+GP + L PQ SVAFIP + RA+ IL+ E
Sbjct: 30 EQGFILTRHWRDTPAGTEVDFWLATDSGPRHIRLRPQPSVAFIPVEHRERAETILRRETP 89
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L+DF +PV GLYC +RQL +EKRL++GGV VYEAD+ PPERY+MERFIT+
Sbjct: 90 LDLRPLDLRDFQHRPVMGLYCPQYRQLTGFEKRLKQGGVDVYEADIFPPERYMMERFITA 149
Query: 123 PVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIV 178
PVW D HNG ++N LKP YRPPLK VS+DIET+ H ELY I LEGCGQR V
Sbjct: 150 PVWFSADAQSNGHNGPLLNGELKPATGYRPPLKLVSLDIETSAHAELYSIALEGCGQRQV 209
Query: 179 YMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAE 238
YMLGP NG+A +LDF+LEY +R QLLEKLNAW +DPD IIGWN+VQFDLR+LQ+HAE
Sbjct: 210 YMLGPPNGNAGALDFDLEYCETRAQLLEKLNAWLERHDPDAIIGWNLVQFDLRVLQQHAE 269
Query: 239 RYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQ 298
+YR+PLRLGR + +EWREHG K FFA A GRLIIDGIEAL+SA W+F SFSLE VA+
Sbjct: 270 QYRIPLRLGRGGAVMEWREHGLKQNHFFAGAAGRLIIDGIEALRSATWSFPSFSLEHVAR 329
Query: 299 ELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATV 358
+LGEGKSIDNP+ RMDEI RRF EDKPALA YNLKDCELVT+IF KT+++PFLLERA+V
Sbjct: 330 SVLGEGKSIDNPYQRMDEIQRRFDEDKPALAQYNLKDCELVTRIFAKTDLLPFLLERASV 389
Query: 359 NGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVL 418
GLP DR GGSVAAF HLY PRMHR GYVAPNLG+V ASPGG+VMDSRPGLYDSVLVL
Sbjct: 390 TGLPADRSGGSVAAFTHLYMPRMHRQGYVAPNLGDVAGAASPGGFVMDSRPGLYDSVLVL 449
Query: 419 DYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRD 478
DYKSLYPSIIRTFLIDP GLVEGM P + S GFL A FSR +HCLP IV +W GR+
Sbjct: 450 DYKSLYPSIIRTFLIDPAGLVEGMLNPADDQSVPGFLGARFSRTRHCLPSIVGQVWQGRE 509
Query: 479 EAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQG 538
AKR+ NKPLSQALKIIMNAFYGVLG+T CRFFDPRLASSITMRGH+IM T+ LI+ +G
Sbjct: 510 TAKRENNKPLSQALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGHEIMHATRELIQGEG 569
Query: 539 YDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETH 597
Y+VIYGDTDSTFVWL+ AH EE+A++IG ALV+H+NAWW + L+++ L SALEL++E H
Sbjct: 570 YEVIYGDTDSTFVWLRHAHGEEDASRIGHALVEHINAWWRQNLRERFGLDSALELQFERH 629
Query: 598 FCRFLMPTIRGADTGSKKRYAGL-IQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRI 656
+ RF MPT+RGA+ GSKKRYAGL + ++ +V+KGLETVRTDWTPLAQQFQQELY RI
Sbjct: 630 YRRFFMPTVRGAEEGSKKRYAGLTVLPDGREDIVYKGLETVRTDWTPLAQQFQQELYRRI 689
Query: 657 FRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKR 716
F +PYQ+YVR+ + + G+LD +LVYRKR+RRPL EY+RNVPPHVRAAR+ADE N+++
Sbjct: 690 FTRQPYQDYVRDYVRDTLEGKLDDQLVYRKRVRRPLGEYERNVPPHVRAARVADEFNRRQ 749
Query: 717 GRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLM 776
GRPLQYQN G I YV T GPEPL+ RS +DYEHYLTRQLQPVA+ ILP + D+F LM
Sbjct: 750 GRPLQYQNGGWISYVMTVAGPEPLETLRSAIDYEHYLTRQLQPVADAILPLLRDDFTALM 809
Query: 777 TGQLGLF 783
+GQ LF
Sbjct: 810 SGQKPLF 816
>ref|ZP_00969710.1| COG0417: DNA polymerase elongation subunit (family B) [Pseudomonas
aeruginosa C3719]
Length = 788
Score = 1115 bits (2885), Expect = 0.0
Identities = 545/782 (69%), Positives = 643/782 (82%), Gaps = 3/782 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV+FWLAT+ GP QV L PQ SVAF+ A+Q R + +L GE G
Sbjct: 7 GFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVAFVLAEQRGRVESLLAGETGAE 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL+DF ++PV GLYC+ HRQLMN EKRLR+ GV V+EAD+RPPERYLMERFIT+PV
Sbjct: 67 LRPLALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAPV 126
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
+E + +G+++ RLKP PDYRP L+ VS+DIET G+LY I LEGCGQR VYMLGP
Sbjct: 127 SLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIETNARGDLYSIALEGCGQRQVYMLGP 186
Query: 184 ENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLP 243
NGDA+++DF L+Y SR LLE+LN W A +DPD IIGWN+VQFDLR+L +HA+R ++P
Sbjct: 187 ANGDAAAVDFRLDYCDSRAGLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHAQRLKVP 246
Query: 244 LRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGE 303
LRLGR E+ WREHG +N FFA A GRLIIDGIEAL+SA WNF SFSLE VA+ LLGE
Sbjct: 247 LRLGRGGDEMGWREHGSRNNHFFAAAAGRLIIDGIEALRSATWNFPSFSLENVARTLLGE 306
Query: 304 GKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPV 363
GK+IDNP+ RMDEIDR FAEDKPALA YNLKDCELVT+IF +TE++ FLLERATV GLP
Sbjct: 307 GKAIDNPYQRMDEIDRMFAEDKPALAHYNLKDCELVTRIFARTELLDFLLERATVTGLPA 366
Query: 364 DRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSL 423
DR GGSVAAF HLY P MHRAG+VAPNLGE P ASPGG+VMDSRPGLY+SVLVLDYKSL
Sbjct: 367 DRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKSL 426
Query: 424 YPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQ 483
YPSIIRTFLIDPVGLVEG+ QPD EHS EGF A FSR +HCLP IV +W GR+ AKR+
Sbjct: 427 YPSIIRTFLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRE 486
Query: 484 GNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIY 543
N+PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMR+T+ LIEA+GY VIY
Sbjct: 487 RNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIY 546
Query: 544 GDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCRFL 602
GDTDSTFVWL +EEEAA IGRALV VN WW E L+++ L SALEL++ETH+ RFL
Sbjct: 547 GDTDSTFVWLGSPRAEEEAAAIGRALVARVNDWWREHLKEEFGLDSALELQFETHYRRFL 606
Query: 603 MPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
MPT+RGA+ GSKKRYAGL++ D + MVFKGLETVRTDW+PLAQ+FQQELYLRIF +P
Sbjct: 607 MPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQP 666
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+YVR+ + + +AGELD LVYRKRLRR L +YQRNVPPHVRAAR+AD+ N +RGRP Q
Sbjct: 667 YQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLERGRPRQ 726
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQ+ G I YV + GPEPL+ +RS +DYEHY+ +QLQPVA+ ILPF+ D+FATL+ Q+
Sbjct: 727 YQSGGWISYVISVAGPEPLEARRSAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMA 786
Query: 782 LF 783
LF
Sbjct: 787 LF 788
>ref|ZP_00975739.1| COG0417: DNA polymerase elongation subunit (family B) [Pseudomonas
aeruginosa 2192]
ref|ZP_01365238.1| hypothetical protein PaerPA_01002354 [Pseudomonas aeruginosa PACS2]
Length = 788
Score = 1113 bits (2880), Expect = 0.0
Identities = 544/782 (69%), Positives = 643/782 (82%), Gaps = 3/782 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV+FWLAT+ GP QV L PQ SVAF+ A+Q R + +L GE G
Sbjct: 7 GFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVAFVLAEQRGRVESLLAGETGAE 66
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL+DF ++PV GLYC+ HRQLMN EKRLR+ GV V+EAD+RPPERYLMERFIT+PV
Sbjct: 67 LRPLALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAPV 126
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
+E + +G+++ RLKP PDYRP L+ VS+DIET G+LY I LEGCGQR VYMLGP
Sbjct: 127 SLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIETNARGDLYSIALEGCGQRQVYMLGP 186
Query: 184 ENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLP 243
NGDA+++DF L+Y SR LLE+LN W A +DPD IIGWN+VQFDLR+L +HA+R ++P
Sbjct: 187 ANGDAAAVDFRLDYCDSRAGLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHAQRLKVP 246
Query: 244 LRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGE 303
LRLGR E+ WREHG +N FFA A GRLIIDGIEAL+SA W+F SFSLE VA+ LLGE
Sbjct: 247 LRLGRGGDEMGWREHGSRNNHFFAAAAGRLIIDGIEALRSATWSFPSFSLENVARTLLGE 306
Query: 304 GKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPV 363
GK+IDNP+ RMDEIDR FAEDKPALA YNLKDCELVT+IF +TE++ FLLERATV GLP
Sbjct: 307 GKAIDNPYQRMDEIDRMFAEDKPALAHYNLKDCELVTRIFARTELLDFLLERATVTGLPA 366
Query: 364 DRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSL 423
DR GGSVAAF HLY P MHRAG+VAPNLGE P ASPGG+VMDSRPGLY+SVLVLDYKSL
Sbjct: 367 DRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKSL 426
Query: 424 YPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQ 483
YPSIIRTFLIDPVGLVEG+ QPD EHS EGF A FSR +HCLP IV +W GR+ AKR+
Sbjct: 427 YPSIIRTFLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRE 486
Query: 484 GNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIY 543
N+PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMR+T+ LIEA+GY VIY
Sbjct: 487 RNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIY 546
Query: 544 GDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCRFL 602
GDTDSTFVWL +EEEAA IGRALV VN WW E L+++ L SALEL++ETH+ RFL
Sbjct: 547 GDTDSTFVWLGSPRAEEEAAAIGRALVARVNDWWREHLKEEFGLDSALELQFETHYRRFL 606
Query: 603 MPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
MPT+RGA+ GSKKRYAGL++ D + MVFKGLETVRTDW+PLAQ+FQQELYLRIF +P
Sbjct: 607 MPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQP 666
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+YVR+ + + +AGELD LVYRKRLRR L +YQRNVPPHVRAAR+AD+ N +RGRP Q
Sbjct: 667 YQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLERGRPRQ 726
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQ+ G I YV + GPEPL+ +RS +DYEHY+ +QLQPVA+ ILPF+ D+FATL+ Q+
Sbjct: 727 YQSGGWISYVISVAGPEPLEARRSAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMA 786
Query: 782 LF 783
LF
Sbjct: 787 LF 788
>ref|NP_250577.1| DNA polymerase II [Pseudomonas aeruginosa PAO1]
gb|AAG05275.1|AE004614_9 DNA polymerase II [Pseudomonas aeruginosa PAO1]
Length = 787
Score = 1111 bits (2873), Expect = 0.0
Identities = 543/782 (69%), Positives = 642/782 (82%), Gaps = 3/782 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV+FWLAT+ GP QV L PQ SVAF+ A+Q R + +L GE G
Sbjct: 6 GFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVAFVLAEQRGRVESLLAGETGAE 65
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL+DF ++PV GLYC+ HRQLMN EKRLR+ GV V+EAD+RPPERYLMERFIT+PV
Sbjct: 66 LRPLALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAPV 125
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
+E + +G+++ RLKP PDYRP L+ VS+DIET G+LY I LEGC QR VYMLGP
Sbjct: 126 SLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIETNARGDLYSIALEGCDQRQVYMLGP 185
Query: 184 ENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLP 243
NGDA+++DF L+Y SR LLE+LN W A +DPD IIGWN+VQFDLR+L +HA+R ++P
Sbjct: 186 ANGDAAAVDFRLDYCDSRAGLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHAQRLKVP 245
Query: 244 LRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGE 303
LRLGR E+ WREHG +N FFA A GRLIIDGIEAL+SA W+F SFSLE VA+ LLGE
Sbjct: 246 LRLGRGGDEMGWREHGSRNNHFFAAAAGRLIIDGIEALRSATWSFPSFSLENVARTLLGE 305
Query: 304 GKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPV 363
GK+IDNP+ RMDEIDR FAEDKPALA YNLKDCELVT+IF +TE++ FLLERATV GLP
Sbjct: 306 GKAIDNPYQRMDEIDRMFAEDKPALAHYNLKDCELVTRIFARTELLDFLLERATVTGLPA 365
Query: 364 DRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSL 423
DR GGSVAAF HLY P MHRAG+VAPNLGE P ASPGG+VMDSRPGLY+SVLVLDYKSL
Sbjct: 366 DRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKSL 425
Query: 424 YPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQ 483
YPSIIRTFLIDPVGLVEG+ QPD EHS EGF A FSR +HCLP IV +W GR+ AKR+
Sbjct: 426 YPSIIRTFLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRE 485
Query: 484 GNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIY 543
N+PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMR+T+ LIEA+GY VIY
Sbjct: 486 RNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIY 545
Query: 544 GDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCRFL 602
GDTDSTFVWL +EEEAA IGRALV VN WW E L+++ L SALEL++ETH+ RFL
Sbjct: 546 GDTDSTFVWLGSPRAEEEAAAIGRALVARVNDWWREHLKEEFGLDSALELQFETHYRRFL 605
Query: 603 MPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
MPT+RGA+ GSKKRYAGL++ D + MVFKGLETVRTDW+PLAQ+FQQELYLRIF +P
Sbjct: 606 MPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQP 665
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+YVR+ + + +AGELD LVYRKRLRR L +YQRNVPPHVRAAR+AD+ N +RGRP Q
Sbjct: 666 YQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLERGRPRQ 725
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQ+ G I YV + GPEPL+ +RS +DYEHY+ +QLQPVA+ ILPF+ D+FATL+ Q+
Sbjct: 726 YQSGGWISYVISVAGPEPLEARRSAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMA 785
Query: 782 LF 783
LF
Sbjct: 786 LF 787
>ref|YP_791353.1| DNA polymerase II [Pseudomonas aeruginosa UCBPP-PA14]
gb|ABJ11076.1| DNA polymerase II [Pseudomonas aeruginosa UCBPP-PA14]
Length = 787
Score = 1110 bits (2870), Expect = 0.0
Identities = 542/782 (69%), Positives = 643/782 (82%), Gaps = 3/782 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GF+LTRHWRDTP GTEV+FWLAT+ GP QV L PQ SVAF+ A+Q R + +L GE G
Sbjct: 6 GFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVAFVLAEQRGRVESLLAGETGAE 65
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L PLAL+DF ++PV GLYC+ HRQLMN EKRLR+ GV V+EAD+RPPERYLMERFIT+PV
Sbjct: 66 LRPLALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAPV 125
Query: 125 WVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183
+E + +G+++ RLKP PDYRP L+ VS+DIET G+LY I LEGCGQR VYMLGP
Sbjct: 126 SLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIETNARGDLYSIALEGCGQRQVYMLGP 185
Query: 184 ENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLP 243
NGDA+++DF L+Y SR LLE+LN W A +DPD IIGWN+VQFDLR+L +HA+R ++P
Sbjct: 186 ANGDAAAVDFCLDYCDSRAGLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHAQRLKVP 245
Query: 244 LRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGE 303
LRLGR E+ WREHG +N FFA A GRLIIDGIEAL+SA W+F SFSLE VA+ LLGE
Sbjct: 246 LRLGRGGDEMGWREHGSRNNHFFAAAAGRLIIDGIEALRSATWSFPSFSLENVARTLLGE 305
Query: 304 GKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPV 363
GK+IDNP+ RMDEIDR FAEDKPALA YNLKDCELVT+IF +TE++ FLLERATV GLP
Sbjct: 306 GKAIDNPYQRMDEIDRMFAEDKPALAHYNLKDCELVTRIFARTELLDFLLERATVTGLPA 365
Query: 364 DRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSL 423
DR GGSVAAF HLY P MHRAG+VAPNLGE P ASPGG+VMDSRPGLY+SVLVLDYKSL
Sbjct: 366 DRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKSL 425
Query: 424 YPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQ 483
YPSIIRTFLIDPVGLVEG+ QPD EHS EGF A FSR +HCLP IV +W GR+ AKR+
Sbjct: 426 YPSIIRTFLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRE 485
Query: 484 GNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIY 543
N+PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMR+T+ LIEA+GY VIY
Sbjct: 486 RNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIY 545
Query: 544 GDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCRFL 602
GDTDSTFVWL +EEEA+ IGRALV VN WW E L+++ L SALEL++ETH+ RFL
Sbjct: 546 GDTDSTFVWLGSPRAEEEASAIGRALVARVNDWWREHLKEEFGLDSALELQFETHYRRFL 605
Query: 603 MPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661
MPT+RGA+ GSKKRYAGL++ D + MVFKGLETVRTDW+PLAQ+FQQELYLRIF +P
Sbjct: 606 MPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQP 665
Query: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721
YQ+YVR+ + + +AGELD LVYRKRLRR L +YQRNVPPHVRAAR+AD+ N +RGRP Q
Sbjct: 666 YQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLERGRPRQ 725
Query: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781
YQ+ G I YV + GPEPL+ +R+ +DYEHY+ +QLQPVA+ ILPF+ D+FATL+ Q+
Sbjct: 726 YQSGGWISYVISVAGPEPLEARRAAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMA 785
Query: 782 LF 783
LF
Sbjct: 786 LF 787
>ref|YP_259587.1| DNA polymerase II [Pseudomonas fluorescens Pf-5]
gb|AAY91753.1| DNA polymerase II [Pseudomonas fluorescens Pf-5]
Length = 786
Score = 1105 bits (2858), Expect = 0.0
Identities = 541/784 (69%), Positives = 638/784 (81%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHWRDTP GT+V FWLATD GP Q+ L Q SVAF+PA Q +A+ +L +
Sbjct: 4 QQGFVLTRHWRDTPAGTQVDFWLATDRGPRQIRLPLQTSVAFVPAAQRAQAERLLTDDPD 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
+L PL L+DFH++PV GLYC H QLM EK LR GV V+EADVRPPERYLMERFIT+
Sbjct: 64 VQLRPLQLRDFHQRPVLGLYCPQHNQLMRLEKTLRRAGVEVFEADVRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G +G ++ A++KP P+YRP LK VS+DIET+ GELY I LEGCGQR VYML
Sbjct: 124 PVSFGGQPGPDGLLLEAQMKPAPNYRPSLKLVSLDIETSERGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
G D S++DF+LE+ ASR QLLE+LN W A +DPD IIGWN+VQFDLR+L +HA R
Sbjct: 184 GKARDDDSAVDFDLEFCASREQLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHARRLA 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLRLGR E++WREHG + +FA A GRLIIDGIEAL+SA W+F SFSLE VAQ LL
Sbjct: 244 VPLRLGRGGEEMQWREHGSRTH-YFASAAGRLIIDGIEALRSATWSFPSFSLENVAQTLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGKSIDNP+ RMDEI+R FAEDKPALA YNLKDCELVT+IF KTE++ FLLERATV GL
Sbjct: 303 GEGKSIDNPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFAKTELLTFLLERATVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
P DR GGSVAAF HLY P MHR G+VAPNLGE+PP ASPGG+VMDSRPGLY+SVLVLDYK
Sbjct: 363 PADRSGGSVAAFTHLYMPLMHRQGFVAPNLGELPPQASPGGFVMDSRPGLYESVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIR+FLIDPVGLVEG+ QPD +HS GF A FSR +HCLP IVT + GR+ AK
Sbjct: 423 SLYPSIIRSFLIDPVGLVEGLRQPDEQHSVAGFRGARFSRTRHCLPSIVTRVAEGREVAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+ N PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IM +T+ LIEAQG+ V
Sbjct: 483 REHNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMARTRQLIEAQGHQV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL G H EE+A IGRALV HVN WW + LQ+Q L SALEL++ETH+ R
Sbjct: 543 IYGDTDSTFVWLGGLHDEEQAGLIGRALVAHVNQWWRDHLQQQYGLESALELQFETHYKR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRGA+ GSKKRYAGL+Q D Q MV+KGLETVRTDW+PLA++FQQELY RIF
Sbjct: 603 FLMPTIRGAEEGSKKRYAGLVQRADGSQEMVYKGLETVRTDWSPLAREFQQELYQRIFHR 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVR+ + + +AG+LD L+YRKRLRRPL +Y+RNVPPHVRAARLADE N+++GRP
Sbjct: 663 QPYQDYVRDYVQRTLAGQLDDLLIYRKRLRRPLDDYERNVPPHVRAARLADEYNREQGRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQN G I YV T GPEPL+ +R+ +DYEHYLTRQLQPVA+ ILPF++D+F+TL+ GQ
Sbjct: 723 LQYQNGGWISYVITLAGPEPLENRRAAIDYEHYLTRQLQPVADAILPFVQDDFSTLVGGQ 782
Query: 780 LGLF 783
+GLF
Sbjct: 783 MGLF 786
>ref|YP_274692.1| DNA polymerase II [Pseudomonas syringae pv. phaseolicola 1448A]
gb|AAZ34517.1| DNA polymerase II [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 787
Score = 1093 bits (2826), Expect = 0.0
Identities = 534/784 (68%), Positives = 627/784 (79%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GFIL+RHW+DTP GTEV FWLATD GP + L Q SVAFIPA+Q RA+ +L+ E+G
Sbjct: 4 QQGFILSRHWQDTPAGTEVDFWLATDQGPRHIRLPCQPSVAFIPAEQGERARSLLRTERG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L DF +PV G+YC+ HRQLMN EK LR G V VYEAD+RPPERYLMERFIT+
Sbjct: 64 VELRPLELCDFRHRPVLGVYCQQHRQLMNIEKMLRRGNVDVYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G G + +A+++P PDYRP LK S+DIETT GELY I LEGCGQR VYML
Sbjct: 124 PVQFSGTPDAEGVLCDAQIRPAPDYRPSLKLASLDIETTARGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NG A LDF+L+Y +R QLLE LN W A +DPD IIGWNVVQFDLR+L +HA+R +
Sbjct: 184 GPPNGGAEELDFQLDYCDTRAQLLECLNGWLALHDPDAIIGWNVVQFDLRVLHEHAQRLQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLRLGR + WREHG +N FFA+ GRLIIDGIEAL+SA W+F SFSLE VAQ LL
Sbjct: 244 VPLRLGRGGEAMGWREHGSRNNHFFAEVSGRLIIDGIEALRSATWSFPSFSLENVAQTLL 303
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+R FAEDKPALA YN+KDCELVT+IF KT+++ FLLERATV GL
Sbjct: 304 GEGKAIDTPYQRMDEINRMFAEDKPALARYNIKDCELVTRIFAKTQLLTFLLERATVTGL 363
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
P DR GGSVAAF HLY P MHR G+VAPNLGE P ASPGG+VMDS+PGLY+SVLVLDYK
Sbjct: 364 PADRSGGSVAAFCHLYIPLMHRQGFVAPNLGERMPEASPGGFVMDSQPGLYESVLVLDYK 423
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGL+EGM P+ S GF A FSR +H LPEIV +W GR+ AK
Sbjct: 424 SLYPSIIRTFLIDPVGLIEGMRHPEDSASVPGFRGARFSRTRHSLPEIVERVWQGRETAK 483
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+ N PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IM +T+ LI+AQGY V
Sbjct: 484 REHNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMLKTRDLIQAQGYTV 543
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL H +EEAA IG+ LVQ VN WW E L + L SALEL+YETHF R
Sbjct: 544 IYGDTDSTFVWLGRPHGQEEAASIGKTLVQQVNQWWREHLHNEYGLHSALELQYETHFRR 603
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPT+RGA+ GSKKRYAGL+ D + MV+KGLETVRTDW+PLAQQFQQELYLRIF+
Sbjct: 604 FLMPTVRGAEEGSKKRYAGLVTRADGSEEMVYKGLETVRTDWSPLAQQFQQELYLRIFKR 663
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ YVR+ + + ++GELD L+YRKRLRR L +YQRNVPPHVRAARLADE N ++GRP
Sbjct: 664 QPYQNYVRDYVQRTLSGELDDLLIYRKRLRRKLDDYQRNVPPHVRAARLADEYNDQQGRP 723
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
QYQ+ G I YV TT GPEPL+ + +P+DY+HY+TRQLQP+A+ ILPF++D+F+TL+ GQ
Sbjct: 724 RQYQSGGWISYVMTTAGPEPLEIRHAPIDYDHYVTRQLQPLADAILPFVDDDFSTLIGGQ 783
Query: 780 LGLF 783
LGLF
Sbjct: 784 LGLF 787
>ref|YP_583797.1| DNA polymerase B, exonuclease [Ralstonia metallidurans CH34]
gb|ABF08528.1| DNA polymerase B, exonuclease [Ralstonia metallidurans CH34]
Length = 789
Score = 1092 bits (2824), Expect = 0.0
Identities = 539/785 (68%), Positives = 630/785 (80%), Gaps = 5/785 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHWRDTP GTEV FWLATD GP ++ L Q S AFIPA Q A+ +L+GE+
Sbjct: 4 QQGFLLTRHWRDTPAGTEVEFWLATDEGPRRLRLPRQPSTAFIPAAQRETAEALLRGERD 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
PL L+DF R+PV G+YC HRQLM EK LR+ GV+VYEADVRPPERYLMERFIT+
Sbjct: 64 VEFRPLNLQDFQRRPVTGIYCDQHRQLMRIEKALRDAGVSVYEADVRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PVW +G +G + +A++KP YRP L+ VS+DIET GELY I LEGCG+R VYML
Sbjct: 124 PVWFDGQPGADGVLRDAQMKPAAGYRPKLRLVSLDIETNAFGELYSIALEGCGERQVYML 183
Query: 182 GPENGD-ASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
GP A+ +DF LEY A+RP LLE LN W A +DPD IIGWN+VQFDLR+L++HA ++
Sbjct: 184 GPTPAQPAADIDFALEYHATRPLLLEALNDWLARHDPDAIIGWNLVQFDLRVLREHARQH 243
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
++PLRLGR +ELEWREH + +FA A GRLIIDGIEAL+SA WNF SFSLE+VA+ L
Sbjct: 244 QIPLRLGRGGAELEWREHNQQQH-YFAAAAGRLIIDGIEALRSATWNFPSFSLESVARTL 302
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGK+IDNP+DRMD IDR FAEDKPALA YNL+DCELVT+IF K E++PFLLERATV G
Sbjct: 303 LGEGKAIDNPYDRMDAIDRMFAEDKPALARYNLRDCELVTRIFEKAELLPFLLERATVTG 362
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LP DR GGSVAAF HLY P MHR GYVAP+LGE P ASPGG+VMDSRPGLY+SVLVLDY
Sbjct: 363 LPADRSGGSVAAFTHLYMPLMHRQGYVAPSLGEKAPEASPGGFVMDSRPGLYESVLVLDY 422
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDP+GLVEG+A PD S GF A FSR KHCLP IV +W GR+ A
Sbjct: 423 KSLYPSIIRTFLIDPIGLVEGLAHPDDAESVPGFRGARFSRTKHCLPAIVARVWQGREAA 482
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KR NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGH+IMRQT+ALIEA+GY+
Sbjct: 483 KRDKNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRQTRALIEARGYE 542
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFC 599
VIYGDTDSTFVWL+ A SE +AA+IGR+LV +VN WW + L Q L SALEL++ETHF
Sbjct: 543 VIYGDTDSTFVWLRRARSEADAAQIGRSLVAYVNDWWRDHLWQTYGLESALELQFETHFR 602
Query: 600 RFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFR 658
RFLMPTIRGAD GSKKRYAG + D MVFKGLETVRTDW+PLAQQFQQ LY +IF
Sbjct: 603 RFLMPTIRGADLGSKKRYAGQVMRADGTAEMVFKGLETVRTDWSPLAQQFQQTLYAKIFN 662
Query: 659 NEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGR 718
EPY++YVR+T+ + +AGELD +L+YRKRLRR L EYQRNVPPHVRAAR+ADE N GR
Sbjct: 663 REPYRDYVRDTVHRTLAGELDEQLIYRKRLRRQLDEYQRNVPPHVRAARIADEYNVLHGR 722
Query: 719 PLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTG 778
P QYQ G I Y+ T GPEPL+ + SP+DYEHY+TRQLQP+A+ ILPF++D+F TL+TG
Sbjct: 723 PRQYQRGGWISYLMTVAGPEPLETRASPIDYEHYVTRQLQPIADAILPFLDDDFETLLTG 782
Query: 779 QLGLF 783
Q+ LF
Sbjct: 783 QMTLF 787
>ref|NP_792430.1| DNA polymerase II [Pseudomonas syringae pv. tomato str. DC3000]
gb|AAO56125.1| DNA polymerase II [Pseudomonas syringae pv. tomato str. DC3000]
Length = 787
Score = 1088 bits (2813), Expect = 0.0
Identities = 532/784 (67%), Positives = 632/784 (80%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GFIL+RHW+DTP GTEV FWLATD+GP + L Q SVAFIPA+Q RAQ +L+ E+G
Sbjct: 4 QQGFILSRHWQDTPAGTEVDFWLATDHGPRHIRLPCQPSVAFIPAEQGERAQSLLRTERG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L DF +PV G+YC+ HRQLMN EK LR G V VYEAD+RPPERYLMERFIT+
Sbjct: 64 VDLRPLELCDFRHRPVLGVYCQQHRQLMNVEKLLRRGNVDVYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G + +G + +A+++P DYRP LK VS+DIETT GELY I LEGCGQR VYML
Sbjct: 124 PVQFGGTPNADGVLCDAQIRPAADYRPRLKLVSLDIETTARGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NG +LDF+L+Y +R QLLE+LN W A +DPD IIGWNVVQFDLR+L +HA+R +
Sbjct: 184 GPANGGDEALDFQLDYCDTRAQLLERLNDWLALHDPDAIIGWNVVQFDLRVLHEHAQRLQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLRLGR + WREHG +N FFA+ GRLIIDGIEAL+SA W+F SFSLE VAQ LL
Sbjct: 244 VPLRLGRGGEAMGWREHGSRNNHFFAEVSGRLIIDGIEALRSATWSFPSFSLENVAQTLL 303
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+R FAEDKPALA YN+KDCELVT+IF KT+++ FLLERATV GL
Sbjct: 304 GEGKAIDTPYQRMDEINRMFAEDKPALARYNIKDCELVTRIFAKTQLLTFLLERATVTGL 363
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
P DR GGSVAAF HLY P MHR G+VAPN GE P ASPGG+VMDS+PGLY+SVLVLDYK
Sbjct: 364 PADRSGGSVAAFCHLYIPLMHRQGFVAPNQGERLPEASPGGFVMDSQPGLYESVLVLDYK 423
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYP+IIRTFLIDPVGL+EGM QP S GF A FSR +H LP IV +W GR+ AK
Sbjct: 424 SLYPAIIRTFLIDPVGLIEGMRQPGDSESVPGFRGARFSRTRHSLPAIVERVWQGREAAK 483
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+ N PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IM +T+ LI+AQGY V
Sbjct: 484 REHNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMLKTRDLIQAQGYTV 543
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL H +EEAA IG+ALVQ VN WW E LQ + L SALEL+YETHF R
Sbjct: 544 IYGDTDSTFVWLGRPHGQEEAAGIGKALVQQVNQWWREHLQNEYGLQSALELQYETHFRR 603
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPT+RGA+ GSKKRYAGL+ D + M++KGLETVRTDW+PLAQ+FQQELYLRIF+
Sbjct: 604 FLMPTVRGAEEGSKKRYAGLVTRADGAEEMIYKGLETVRTDWSPLAQRFQQELYLRIFKR 663
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVR+ + + ++GELD L+YRKRLRR L +YQRNVPPHVRAARLADE N ++GRP
Sbjct: 664 QPYQDYVRDYVQRTLSGELDDLLIYRKRLRRKLDDYQRNVPPHVRAARLADEYNDQQGRP 723
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
QYQ+ G I YV TT GPEPL+ + +P+DY+HY+TRQLQP+A+ ILPF++D+F+TL+ GQ
Sbjct: 724 RQYQSGGWISYVMTTVGPEPLEIRHAPIDYDHYVTRQLQPLADAILPFVDDDFSTLIGGQ 783
Query: 780 LGLF 783
LGLF
Sbjct: 784 LGLF 787
>ref|YP_235438.1| DNA polymerase II [Pseudomonas syringae pv. syringae B728a]
gb|AAY37400.1| DNA polymerase B, exonuclease:DNA polymerase B region [Pseudomonas
syringae pv. syringae B728a]
Length = 787
Score = 1086 bits (2809), Expect = 0.0
Identities = 530/784 (67%), Positives = 630/784 (80%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GFIL+RHW+DTP GTEV FWLATD GP + L Q SVAFIPA+Q RA+ +L+ E+G
Sbjct: 4 QQGFILSRHWQDTPAGTEVDFWLATDQGPRHIRLPCQPSVAFIPAEQGERARSLLRTERG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L DF +PV G+YC+ HRQLMN EK LR G V VYEAD+RPPERYLMERFIT+
Sbjct: 64 VELRPLELCDFRHRPVLGVYCQQHRQLMNIEKLLRRGNVDVYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G +G + +A+++P PDYRP L+ VS+DIETT GELY I LEGCGQR VYML
Sbjct: 124 PVQFGGTPDADGVLCDAQIRPSPDYRPNLRLVSLDIETTARGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NG +LDF+L+Y +R QLLE+LN W A +DPD IIGWNV+QFDLR+L +HA+R +
Sbjct: 184 GPANGGDETLDFQLDYCDTRAQLLERLNDWLALHDPDAIIGWNVIQFDLRVLHEHAQRLQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLRLGR + WREHG +N FFA+ GRLIIDGIEAL+SA W+F SFSLE VAQ LL
Sbjct: 244 VPLRLGRGGEAMGWREHGSRNNHFFAEVSGRLIIDGIEALRSATWSFPSFSLEYVAQTLL 303
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+R FAEDKPALA YN+KDCELV++IF KT+++ FLLERATV GL
Sbjct: 304 GEGKAIDTPYQRMDEINRMFAEDKPALARYNIKDCELVSRIFAKTQLLTFLLERATVTGL 363
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
P DR GGSVAAF HLY P MHR G+VAPNLGE P ASPGG+VMDS+PGLY+SVLVLDYK
Sbjct: 364 PADRSGGSVAAFCHLYIPLMHRQGFVAPNLGERLPEASPGGFVMDSQPGLYESVLVLDYK 423
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGL+EG+ P S GF A FSR +H LP IV +W GR+ AK
Sbjct: 424 SLYPSIIRTFLIDPVGLIEGLRHPADSESVPGFRGARFSRTRHSLPAIVERVWQGREAAK 483
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+ N PLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IM +T+ LI+AQGY V
Sbjct: 484 REQNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMLKTRDLIQAQGYTV 543
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL H +EEAA IG+ALVQ VN WW E L + L SALEL+YETHF R
Sbjct: 544 IYGDTDSTFVWLGRPHGQEEAASIGKALVQQVNQWWREHLHTEYGLHSALELQYETHFRR 603
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPT+RGA+ GSKKRYAGL+ D + MV+KGLETVRTDW+PLAQQFQQELYLRIF+
Sbjct: 604 FLMPTVRGAEEGSKKRYAGLVTRADGSEEMVYKGLETVRTDWSPLAQQFQQELYLRIFKR 663
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVR+ + + ++GELD L+YRKRLRR L +YQRNVPPHVRAARLADE N ++GRP
Sbjct: 664 QPYQDYVRDYVQRTLSGELDDLLIYRKRLRRKLDDYQRNVPPHVRAARLADEYNDQQGRP 723
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
QYQ+ G I YV TT GPEPL+ + +P+DY+HY+TRQLQP+A+ ILPF++D+F+TL+ GQ
Sbjct: 724 RQYQSGGWISYVMTTAGPEPLEIRHAPIDYDHYVTRQLQPLADAILPFVDDDFSTLIGGQ 783
Query: 780 LGLF 783
LGLF
Sbjct: 784 LGLF 787
>ref|YP_349463.1| DNA polymerase II [Pseudomonas fluorescens PfO-1]
gb|ABA75472.1| DNA polymerase B region [Pseudomonas fluorescens PfO-1]
Length = 787
Score = 1085 bits (2806), Expect = 0.0
Identities = 536/784 (68%), Positives = 629/784 (80%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHWRDTP GTEV FWLATD GP +V L Q SVAFIPA Q +A+ +L E+
Sbjct: 5 QQGFVLTRHWRDTPAGTEVEFWLATDAGPRRVRLPHQPSVAFIPAAQREQAERVLADEKN 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF +PV GLYC+ H QLM E L V V+EADVRPPERYLMERFIT+
Sbjct: 65 VELRPLALQDFEHRPVLGLYCQQHGQLMRLETALNRHSVDVFEADVRPPERYLMERFITA 124
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PVW G +G +++A LKP PDYRP L+ VS+DIETT GELY I LEGCG+R VYML
Sbjct: 125 PVWFSGTPDADGVLLDAHLKPAPDYRPQLRLVSLDIETTEQGELYSIALEGCGERQVYML 184
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
G NGDAS +DF+LEY SR +L+KLN WFA +DPD IIGWN+VQFDLR+L +HA R
Sbjct: 185 GAPNGDASIVDFDLEYCESRTLILKKLNDWFARHDPDAIIGWNLVQFDLRILHEHARRLG 244
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL+LGR E++WREHG +N +FA A GRLIIDGIE+L+SA W+F SFSLE VAQ LL
Sbjct: 245 VPLKLGRGGEEMQWREHGSRNH-YFAAAAGRLIIDGIESLRSATWSFPSFSLENVAQTLL 303
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGKSIDNP+ RMDEI+R FAEDKPALA YNLKDCELVT+IF KTE++ FLLERA+V GL
Sbjct: 304 GEGKSIDNPYQRMDEINRMFAEDKPALAKYNLKDCELVTRIFAKTELLKFLLERASVTGL 363
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
P DR GGSVAAF HLY P MHR G+VAPNLG PP ASPGG+VMDSRPGLY+SVLVLDYK
Sbjct: 364 PADRSGGSVAAFTHLYMPLMHRQGFVAPNLGTNPPQASPGGFVMDSRPGLYESVLVLDYK 423
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGL+EG+ PD S GF A FSR +HCLP IV + GR+ AK
Sbjct: 424 SLYPSIIRTFLIDPVGLIEGLQHPDDSDSVPGFRGARFSRTRHCLPSIVARVAEGRETAK 483
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+ N PLSQALKIIMNAFYGVLG++ CRFFD RLASSIT+RGH+IM +T+ LIEAQG+ V
Sbjct: 484 REHNAPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRQLIEAQGHAV 543
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL+ H +EEAA+IGRALVQHVN WW E +++Q L SALEL++ETH+ R
Sbjct: 544 IYGDTDSTFVWLRRPHGQEEAAQIGRALVQHVNDWWREHVREQYGLESALELQFETHYKR 603
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRGA+ GSKKRYAGL+ D + MV+KGLETVRTDW+ LA+QFQQELY RIF+
Sbjct: 604 FLMPTIRGAEEGSKKRYAGLVTRADGSEEMVYKGLETVRTDWSLLARQFQQELYERIFQR 663
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PYQ+YVRE + K +AGE D RLVYRKRLRR L +Y+RNVPPHVRAARLAD+ N + GRP
Sbjct: 664 KPYQDYVREYVRKTLAGEFDERLVYRKRLRRTLDDYERNVPPHVRAARLADDYNAQHGRP 723
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
QYQN G I YV T GPEPL+ +R+ +DY+HY+TRQLQPVA+ ILPF++D+F+TL+ GQ
Sbjct: 724 RQYQNGGWISYVITLAGPEPLEVRRAAIDYDHYITRQLQPVADAILPFVDDDFSTLIGGQ 783
Query: 780 LGLF 783
LGLF
Sbjct: 784 LGLF 787
>ref|YP_726151.1| DNA polymerase II [Ralstonia eutropha H16]
emb|CAJ92783.1| DNA polymerase II [Ralstonia eutropha H16]
Length = 788
Score = 1085 bits (2805), Expect = 0.0
Identities = 530/784 (67%), Positives = 631/784 (80%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GFILTRHWRDTP GTEV FWLATD+GP + L+ Q SVAFIP Q RA+ +L+ E+
Sbjct: 4 QQGFILTRHWRDTPAGTEVEFWLATDDGPRHLHLSCQPSVAFIPESQRERAEALLRRERE 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L+DF R+PV GLYCR HRQL+ + LR+ GV VYEAD+RPPERYLMERFIT+
Sbjct: 64 VELRPLKLQDFQRRPVLGLYCRQHRQLIQLSRSLRDAGVDVYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PVW +G+ G + NA++KP YRP L+ VS+DIET GELY IGLEGCGQR VYML
Sbjct: 124 PVWFDGEPDPGGALRNAQMKPSECYRPKLRLVSLDIETNAFGELYSIGLEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
G + +DF LEY A+RP+LLEKLN W A++DPD IIGWN+VQFDLR+L +HA +++
Sbjct: 184 GAAPQMPADVDFSLEYCATRPELLEKLNQWLADHDPDAIIGWNLVQFDLRVLHEHARKFQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
LPLRLGR +E+EWREH + +FA A GRLIIDGIEAL+SA W+F SFSLE+VAQ LL
Sbjct: 244 LPLRLGRGGAEMEWREHNAQQH-YFASAPGRLIIDGIEALRSATWSFPSFSLESVAQTLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK++DNP+DRMD IDR F +DKPALA YNL+DCELVT+IF KTE++PFLLERATV GL
Sbjct: 303 GEGKAVDNPYDRMDAIDRMFEQDKPALARYNLRDCELVTRIFEKTELLPFLLERATVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
P DR+GGSVAAF HLY P MHR GYVAPNLGE P ASPGG+VMDSRPGLY+SVLVLDYK
Sbjct: 363 PADRNGGSVAAFTHLYMPLMHRQGYVAPNLGEKAPEASPGGFVMDSRPGLYESVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDP+GLVEG+A PD S GF A FSR KHCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPIGLVEGLAHPDDADSLPGFRGARFSRTKHCLPAIVARVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R NKPLSQALKIIMNAFYGVLG++ CRFFD RLASSITMRGH+IMRQT+ALIEA+GY+V
Sbjct: 483 RDRNKPLSQALKIIMNAFYGVLGSSGCRFFDARLASSITMRGHEIMRQTRALIEARGYEV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCR 600
IYGDTDSTFVWL+ A +E +A +IGR+LV +VN WW + L Q L SALEL++ETHF R
Sbjct: 543 IYGDTDSTFVWLRRARTEADARQIGRSLVAYVNDWWRDHLWQTYGLESALELQFETHFRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRG D GSKKRYAG ++ D K MVFKGLETVRTDW+PLAQ+FQQ LY +IF
Sbjct: 603 FLMPTIRGTDLGSKKRYAGQVERPDGKIEMVFKGLETVRTDWSPLAQRFQQTLYEKIFNR 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPY +YVR+ + + +AGELD +LVYRKRLRR L +YQRNVPPHVRAAR+AD N+++GRP
Sbjct: 663 EPYADYVRDIVRRTLAGELDEQLVYRKRLRRKLDDYQRNVPPHVRAARIADAYNERQGRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
QYQ+ G I YV T +GPEPL+ + +P+DY HY+ +QLQP+A+ ILPF++D+F TL+ GQ
Sbjct: 723 RQYQHGGWISYVMTVSGPEPLETRSAPVDYGHYVNKQLQPIADAILPFLDDDFETLLAGQ 782
Query: 780 LGLF 783
+ LF
Sbjct: 783 MALF 786
>ref|YP_298778.1| DNA-directed DNA polymerase B [Ralstonia eutropha JMP134]
gb|AAZ63934.1| DNA-directed DNA polymerase B [Ralstonia eutropha JMP134]
Length = 788
Score = 1082 bits (2799), Expect = 0.0
Identities = 526/784 (67%), Positives = 630/784 (80%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GFILTRHWRDTP GTEV WLATD+GP + L PQ SVAF+P Q RA+ +LQG+
Sbjct: 4 QQGFILTRHWRDTPAGTEVEVWLATDDGPRLLRLPPQPSVAFVPEAQRQRAEAVLQGDAT 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L+DF+++PV GLYCR +RQL + + LR+ GV VYEAD+RPPERYLMERFIT+
Sbjct: 64 VDLRPLRLQDFNQRPVSGLYCRQYRQLGQHSRALRDAGVDVYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PVW +GD +G + NA++KP DYRP L+ VS+DIET G+LY I LEGCGQR VYML
Sbjct: 124 PVWYDGDADGSGVVRNAQMKPATDYRPTLRLVSLDIETNAFGDLYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
P + ++F LEY +RP LLE+LNAW +DPD IIGWN+VQFDLR+L +HA +++
Sbjct: 184 CPAPSVPADVEFSLEYCETRPALLERLNAWMGRHDPDAIIGWNLVQFDLRVLHEHARKFQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLRLGR +E+EWREHG + +FA A GRLIIDGIEAL+SA W F SFSLE+VAQ LL
Sbjct: 244 VPLRLGRGGAEMEWREHGSQQH-YFAGAAGRLIIDGIEALRSATWTFPSFSLESVAQSLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+IDNP+DRMD IDR F +DKPALA YNL+DCELVT+IF KTE++ FLLERATV GL
Sbjct: 303 GEGKAIDNPYDRMDAIDRMFEQDKPALARYNLRDCELVTRIFDKTELLTFLLERATVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY P MHR GYVAPNLG+ P ASPGG+VMDSRPGLY+SVLVLDYK
Sbjct: 363 QADRSGGSVAAFTHLYMPLMHRQGYVAPNLGDKAPEASPGGFVMDSRPGLYESVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDP+GLVEG+A PD S GF A FSR KHCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPIGLVEGLAHPDDADSVAGFRGARFSRTKHCLPSIVARVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R GNKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGH+IM+QT+ LIEA+GY+V
Sbjct: 483 RDGNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMQQTRTLIEARGYEV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCR 600
IYGDTDSTFVWL+ A +E +A++IGR+LV +VN WW + L Q L SALEL++ETHF R
Sbjct: 543 IYGDTDSTFVWLRRARTEADASQIGRSLVAYVNDWWRDHLWQTYGLESALELQFETHFRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRG D GSKKRYAG +Q D + MVFKGLETVRTDW+PLAQ+FQQ LY RIF
Sbjct: 603 FLMPTIRGTDLGSKKRYAGQVQRPDGRVEMVFKGLETVRTDWSPLAQEFQQVLYERIFNR 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPYQ+YVR+ + + +AGELD +LV+RKRLRR L +YQRNVPPHVRAAR+AD N++ GRP
Sbjct: 663 EPYQDYVRDIVRRTLAGELDEQLVFRKRLRRKLDDYQRNVPPHVRAARIADAHNERHGRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ+ G I YV T GPEPL+ + +P+DY HY+T+QLQP+A+ ILPF++++F TL+TGQ
Sbjct: 723 LQYQHGGWISYVMTVAGPEPLEVRSAPIDYGHYVTKQLQPIADAILPFLDEDFETLLTGQ 782
Query: 780 LGLF 783
+ LF
Sbjct: 783 MALF 786
>ref|YP_608907.1| DNA polymerase II and 3'-> 5' exonuclease [Pseudomonas entomophila
L48]
emb|CAK16116.1| DNA polymerase II and 3'-> 5' exonuclease [Pseudomonas]
Length = 788
Score = 1082 bits (2797), Expect = 0.0
Identities = 530/776 (68%), Positives = 625/776 (80%), Gaps = 4/776 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHW DTP+GT V +WLATD GP ++ LA Q SVAFIP + A+ +L GEQG
Sbjct: 4 QQGFVLTRHWHDTPEGTCVEYWLATDQGPRRLRLAAQPSVAFIPVEHAEHARALLAGEQG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PL L+DF ++PV GLYC+ HRQL+ +KRLR GV VYEAD+RPPERYLMERFIT+
Sbjct: 64 VELKPLQLRDFDQRPVLGLYCQQHRQLIALDKRLRTAGVEVYEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV +G + G +++A+LKP PDYRPPL+ VS+DIET+ GELY I LEGCGQR VYML
Sbjct: 124 PVRFDGRLDAQGVLLDAQLKPDPDYRPPLRLVSLDIETSERGELYSIALEGCGQRDVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NG +DF L Y A R L++ LN W A +DPD IIGWN+VQFDLR+L +HA+R
Sbjct: 184 GPANGAVCEVDFNLHYCADRAALIDSLNQWLARHDPDAIIGWNLVQFDLRLLHEHAQRLN 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL LGRD + + REHG ++ FFA+A GRL+IDGIEAL+SA W+F SFSLE+VAQ+LL
Sbjct: 244 VPLCLGRDGAPMHLREHGSRSH-FFAEAPGRLLIDGIEALRSATWSFPSFSLESVAQQLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+R FAEDKPALA YNLKDCELVT+IF T ++ FLLERA+V GL
Sbjct: 303 GEGKAIDTPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
VDR GGSVAAF HLY P MHR GYVAPNLG ASPGG+VMDSRPGLYDSVLVLDYK
Sbjct: 363 AVDRSGGSVAAFCHLYIPHMHRMGYVAPNLGSREGEASPGGFVMDSRPGLYDSVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLVEG+ QPD HS EGF A FSR +HCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPVGLVEGLRQPDDAHSVEGFRGARFSRRQHCLPAIVERVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R GN PLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGHQIMRQT+ LIEA+G+DV
Sbjct: 483 RDGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRLLIEARGFDV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCR 600
IYGDTDSTFVWLKGAH E+ AA+IGR LV VN WW L + L SALEL+YETH+ R
Sbjct: 543 IYGDTDSTFVWLKGAHDEDAAARIGRELVAEVNQWWRLHLGETMGLASALELQYETHYRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRGA+ GSKKRYAGL++ D + MV+KGLE+VRTDW+PLA+QFQQELY RIFR
Sbjct: 603 FLMPTIRGAEEGSKKRYAGLVRRVDGSEEMVYKGLESVRTDWSPLARQFQQELYGRIFRG 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PY++Y+RE +++ MAGELD L+YRKRLRRPL++YQRNVPPHVRAARLADE N++ GRP
Sbjct: 663 QPYRDYLREYVERTMAGELDELLIYRKRLRRPLADYQRNVPPHVRAARLADEYNRRLGRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
LQYQ G I YV TT GPEPL+ +++P+D+EHYLTRQLQPVA+ ILPF+ + L
Sbjct: 723 LQYQRGGWISYVITTAGPEPLENRQAPIDHEHYLTRQLQPVADAILPFVAERTVDL 778
>ref|ZP_01505446.1| DNA polymerase B region [Burkholderia phymatum STM815]
gb|EAU94641.1| DNA polymerase B region [Burkholderia phymatum STM815]
Length = 792
Score = 1077 bits (2784), Expect = 0.0
Identities = 528/788 (67%), Positives = 628/788 (79%), Gaps = 7/788 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQ- 61
+ GF+LTRHWRDT TEV FWLATD+GP + L PQ +VAF+PA Q PRA +L+ E+
Sbjct: 5 EQGFLLTRHWRDTGTETEVEFWLATDDGPRHIRLRPQPNVAFVPAAQRPRADEVLRQEKS 64
Query: 62 --GFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERF 119
G L PL L+DF +PV GLYC +RQL+ EKRL++GGV VYEADV PP+RY+MERF
Sbjct: 65 TRGVELRPLDLRDFQHRPVLGLYCPQYRQLIGLEKRLKQGGVDVYEADVFPPDRYMMERF 124
Query: 120 ITSPVWVEGDMH--NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRI 177
IT+PV G+ + G ++N +KP YRP L+ VS+DIET+ ELY I LEGCGQR
Sbjct: 125 ITAPVLFRGEANPIGGPLLNGDMKPATGYRPKLRLVSLDIETSAQAELYSIALEGCGQRQ 184
Query: 178 VYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
VYMLGPENGDAS LDF LEY +R QL+E+L W +DPD IIGWNVVQFDL++L + A
Sbjct: 185 VYMLGPENGDASGLDFALEYCETRAQLIERLVEWLERHDPDAIIGWNVVQFDLKVLHETA 244
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
+RY +PLR+GR + LEWREHG K FFA A GRLIIDGIEAL+SA W+F SFSLE VA
Sbjct: 245 QRYGVPLRIGRGGAVLEWREHGLKQNHFFAGAAGRLIIDGIEALRSATWSFPSFSLEYVA 304
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q +LGEGKSIDNP+ RM+EI RRF EDKPALA YNLKDCELVT++F KT+++ FLLERAT
Sbjct: 305 QSVLGEGKSIDNPYQRMEEIQRRFDEDKPALARYNLKDCELVTRVFAKTDLLSFLLERAT 364
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GLP DR GGSVAAF HLY PRMHR G+VAPNLG+V ASPGG+VMDS+PGLYDSVLV
Sbjct: 365 VTGLPADRSGGSVAAFTHLYMPRMHRLGFVAPNLGDVAGAASPGGFVMDSKPGLYDSVLV 424
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
LDYKSLYPSIIR+FLIDPVGL++G+ PD S GFL A FSR +HCLP IV +W GR
Sbjct: 425 LDYKSLYPSIIRSFLIDPVGLIDGLRHPDDADSVPGFLGARFSRAQHCLPSIVAQVWEGR 484
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
+ AKR+ NKPLSQALKIIMNAFYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEA
Sbjct: 485 EAAKREQNKPLSQALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAS 544
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
GY VIYGDTDSTFVWLK AH E++A +IGR LV +NAWW E L+++ L SALEL++E
Sbjct: 545 GYTVIYGDTDSTFVWLKHAHDEQDAVRIGRELVGAINAWWREHLRERFDLESALELQFER 604
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RF MPT+RGA+ GSKKRYAGL D + +V+KGLETVRTDWTPLAQ+FQQELYLR
Sbjct: 605 HYRRFFMPTVRGAEEGSKKRYAGLTVMADGSEEVVYKGLETVRTDWTPLAQRFQQELYLR 664
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
IF+ +PY++YVR+ + + +AGE D LVYRKRLRRPLS+Y+RNVPPHVRAAR ADE N++
Sbjct: 665 IFKQQPYRDYVRDYVRRTLAGEFDDLLVYRKRLRRPLSDYERNVPPHVRAARSADEFNRQ 724
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
RGRPLQYQN G I YV T +GPEPL+ RSP+D+EHYLT+QLQPVA+ ILP ++D+F TL
Sbjct: 725 RGRPLQYQNGGWISYVMTGSGPEPLETLRSPIDHEHYLTKQLQPVADAILPLLKDDFVTL 784
Query: 776 MTGQLGLF 783
GQ LF
Sbjct: 785 AAGQAQLF 792
>ref|ZP_01524745.1| DNA polymerase B region [Pseudomonas mendocina ymp]
gb|EAV23956.1| DNA polymerase B region [Pseudomonas mendocina ymp]
Length = 786
Score = 1067 bits (2760), Expect = 0.0
Identities = 528/784 (67%), Positives = 627/784 (79%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+L+RHWRDTPQGTEV+FWLATD GP+QV L Q SVAFIPA+Q A+ +L GEQG
Sbjct: 4 QQGFVLSRHWRDTPQGTEVAFWLATDAGPIQVRLPVQPSVAFIPAEQRAWAEPLLAGEQG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L LAL+DF ++PV GLYC+ +RQL+ EK+LR+ GV VYEAD+RPP+RYLMERFIT+
Sbjct: 64 AELRELALRDFRQRPVLGLYCQQYRQLLQLEKKLRQAGVDVYEADIRPPDRYLMERFITA 123
Query: 123 PVWVEG-DMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
V EG + +G+++ LK DYRP L+ VS+DIET+ GELY I LEGCGQR VYML
Sbjct: 124 SVTFEGVEQQDGSLLCKSLKAAADYRPALRLVSLDIETSARGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDAS +DFEL++ SR LLE+LN W A +DPD IIGWN+VQFDLR+L+ HAE+ +
Sbjct: 184 GPANGDASGVDFELQFCDSRKALLERLNDWLARFDPDAIIGWNLVQFDLRVLRDHAEQLK 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PLRLGR + WR+H +FA+A GRLIIDGIEAL+SA W+F SFSLE+VAQ LL
Sbjct: 244 VPLRLGRGGDVMGWRQHNSSQH-YFAEAAGRLIIDGIEALRSATWSFPSFSLESVAQTLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI R F EDKPALA YNLKDCELVT+IF T+++ FLLER++V GL
Sbjct: 303 GEGKAIDTPYARMDEIQRMFDEDKPALARYNLKDCELVTRIFAHTDLLAFLLERSSVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY P MHR G+VAPNLG++ SPGG+VMDSRPGLYDSVLVLDYK
Sbjct: 363 AADRSGGSVAAFTHLYLPPMHRLGFVAPNLGDIRGENSPGGFVMDSRPGLYDSVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIR+FLIDPVGLVEG+ QPD HS EGF A FSR +HCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRSFLIDPVGLVEGLQQPDDAHSVEGFRGARFSRSRHCLPAIVERVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R GN LSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGHQIMR+T+ LIEA+G+ V
Sbjct: 483 RDGNAALSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMRRTRELIEAEGHAV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCR 600
IYGDTDSTFVWL AH E EAA+IGRALV VNAWW E L + LTSALEL++ETH+ R
Sbjct: 543 IYGDTDSTFVWLGRAHDEAEAAQIGRALVARVNAWWREHLADEYGLTSALELQFETHYRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRG + GSKKRYAGL++ D +RMVFKGLETVR+DW+PLAQ+FQQELY +F
Sbjct: 603 FLMPTIRGTEEGSKKRYAGLVRAADGSERMVFKGLETVRSDWSPLAQRFQQELYRLVFAG 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PY +YVR+ + + +AGELD LVYRKRLRR L +YQRNVPPHVRAAR ADE NQ+ GRP
Sbjct: 663 QPYADYVRDYVKRTLAGELDELLVYRKRLRRRLDDYQRNVPPHVRAARSADEHNQRLGRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ G I Y+ TT GP+PL+ SP+DYEHYL+RQL+PVA+ ILPF+ +F L+ GQ
Sbjct: 723 LQYQRGGWISYLITTTGPQPLERLLSPIDYEHYLSRQLKPVADAILPFVGGDFERLVDGQ 782
Query: 780 LGLF 783
LGLF
Sbjct: 783 LGLF 786
>ref|NP_744541.1| DNA polymerase II [Pseudomonas putida KT2440]
gb|AAN68005.1|AE016432_14 DNA polymerase II [Pseudomonas putida KT2440]
Length = 786
Score = 1067 bits (2759), Expect = 0.0
Identities = 530/784 (67%), Positives = 621/784 (79%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHW DTP+GT V FWLATD GP + LA QESVAFIP Q A+ +L E G
Sbjct: 4 QQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLANETG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
+L PL LKDF +P+ GLY R HRQLM E+RLR G+ V+EAD+RPPERYLMERFIT+
Sbjct: 64 TKLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G G +A+LKP P YRP L+ VS+DIET+ GELY I LEGCGQR VYML
Sbjct: 124 PVQFTGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDAS LDF+LEY A R L+ +LN W A +DPD IIGWN+VQFDLR+L +HA+ +
Sbjct: 184 GPANGDASGLDFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAKSLQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL LGR+ + + R H G FA A GRL+IDGIEAL+SA W+F+SFSLE VAQ LL
Sbjct: 244 VPLALGRNGAVMTLRSHA-GGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQTLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+RRFAEDKPALA YNLKDCELVT+IF T ++ FLLERA+V GL
Sbjct: 303 GEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
VDR GGSVAAF HLY P+MHR G+VAP+LG P ASPGG+VMDSRPGLYDSVLVLDYK
Sbjct: 363 AVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGL+EG+ QPD HS EGF FSR +HCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+GN PLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGHQIMRQT++LIEA GYDV
Sbjct: 483 REGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWW-AETLQKQRLTSALELEYETHFCR 600
IYGDTDSTFVWLKGAH+EE+AA+IGR LV VN WW A + L SALEL++E H+ R
Sbjct: 543 IYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVHYRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRG D GSKKRYAGL+Q D + MV+KGLE+VRTDW+PLA+QFQQELY R+FR+
Sbjct: 603 FLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVFRS 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPY++YVRE + + +AGE D LVYRKRLRRPL++YQRNVPPHVRAARLAD+ N++ RP
Sbjct: 663 EPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ G I YV TT GPEPL+ ++P+DY+HY++RQL PVA+ ILPF+ D+FA L Q
Sbjct: 723 LQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTDHQ 782
Query: 780 LGLF 783
L LF
Sbjct: 783 LLLF 786
>ref|ZP_00897810.1| DNA-directed DNA polymerase B [Pseudomonas putida F1]
gb|EAP52673.1| DNA-directed DNA polymerase B [Pseudomonas putida F1]
Length = 786
Score = 1066 bits (2758), Expect = 0.0
Identities = 529/784 (67%), Positives = 621/784 (79%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHW DTP+GT V FWLATD GP + LA QESVAFIP Q A+ +L E G
Sbjct: 4 QQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLANEAG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
+L PL LKDF +P+ GLY R HRQLM E+RLR G+ V+EAD+RPPERYLMERFIT+
Sbjct: 64 TKLKPLRLKDFEHRPMLGLYARQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G G +A+LKP P YRP L+ VS+DIET+ GELY I LEGCGQR VYML
Sbjct: 124 PVQFTGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDA+ LDF+LEY A R L+ +LN W A +DPD IIGWN+VQFDLR+L +HA+ +
Sbjct: 184 GPANGDATGLDFDLEYCADRAALITRLNQWMAKHDPDAIIGWNLVQFDLRLLHEHAKSLQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL LGR+ + + R H G FA A GRL+IDGIEAL+SA W+F+SFSLE VAQ LL
Sbjct: 244 VPLALGRNGAVMTLRSHA-GGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQTLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+RRFAEDKPALA YNLKDCELVT+IF T ++ FLLERA+V GL
Sbjct: 303 GEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
VDR GGSVAAF HLY P+MHR G+VAP+LG P ASPGG+VMDSRPGLYDSVLVLDYK
Sbjct: 363 AVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGL+EG+ QPD HS EGF FSR +HCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+GN PLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGHQIMRQT++LIEA GYDV
Sbjct: 483 REGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWW-AETLQKQRLTSALELEYETHFCR 600
IYGDTDSTFVWLKGAH+EE+AA+IGR LV VN WW A + L SALEL++E H+ R
Sbjct: 543 IYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLQSALELQFEVHYRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRG D GSKKRYAGL+Q D + MV+KGLE+VRTDW+PLA+QFQQELY R+FR+
Sbjct: 603 FLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVFRS 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPY++YVRE + + +AGE D LVYRKRLRRPL++YQRNVPPHVRAARLAD+ N++ RP
Sbjct: 663 EPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ G I YV TT GPEPL+ ++P+DY+HY++RQL PVA+ ILPF+ D+FA L Q
Sbjct: 723 LQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTDHQ 782
Query: 780 LGLF 783
L LF
Sbjct: 783 LLLF 786
>ref|ZP_01639523.1| DNA polymerase B region [Pseudomonas putida W619]
gb|EAX18380.1| DNA polymerase B region [Pseudomonas putida W619]
Length = 786
Score = 1064 bits (2751), Expect = 0.0
Identities = 530/784 (67%), Positives = 616/784 (78%), Gaps = 4/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
Q GF+LTRHW DTP+GT V FWLATD GP + LA QESVAFIP Q A+ +L E G
Sbjct: 4 QQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARLLLANETG 63
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
+ PL LKDF +P+ GLY R HRQLM E+RLR G+ V+EAD+RPPERYLMERFIT+
Sbjct: 64 TQFKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITA 123
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G G A+L+P P YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 124 PVQFAGQPDAQGVYREAQLRPLPGYRPALRLVSLDIETSEHGELYSIALEGCGQRQVYML 183
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDA+ LDF+LEY R L+ LN W A +DPD IIGWN+VQFDLR+L +HA +
Sbjct: 184 GPANGDATGLDFDLEYCPDRAALITCLNQWMARHDPDAIIGWNLVQFDLRLLHEHARSLQ 243
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL LGR+ + + R H G FA A GRL+IDGIEAL+SA W+F SFSLE+VAQ LL
Sbjct: 244 VPLALGRNGAPMTVRSHS-GGGHVFADAPGRLLIDGIEALRSATWSFPSFSLESVAQTLL 302
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK+ID P+ RMDEI+RRFAEDKPALA YNLKDCELVT+IF T ++ FLLER++V GL
Sbjct: 303 GEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLEFLLERSSVTGL 362
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
VDR GGSVAAF HLY P+MHR G+VAPNLG P +SPGG+VMDSRPGLYDSVLVLDYK
Sbjct: 363 AVDRSGGSVAAFCHLYIPQMHRMGFVAPNLGSRPDESSPGGFVMDSRPGLYDSVLVLDYK 422
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGLVEG+ PD EHS EGF A FSR +HCLP IV +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPVGLVEGLRLPDDEHSVEGFRGARFSRSQHCLPAIVERVWQGREAAK 482
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+GN PLSQALKIIMNAFYGVLG++ CRFFDPRLASSITMRGHQIMRQT+ALIE +GY+V
Sbjct: 483 REGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRALIEDKGYEV 542
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWLKGAH E AA+IG LV HVN WW E L++Q L SALEL++E H+ R
Sbjct: 543 IYGDTDSTFVWLKGAHGEAAAAQIGHELVAHVNRWWREHLREQMNLESALELQFEVHYRR 602
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPTIRG D GSKKRYAGL+Q D + +V+KGLE+VRTDW+ LAQQFQQELY RIFR
Sbjct: 603 FLMPTIRGTDEGSKKRYAGLVQRTDGSENVVYKGLESVRTDWSALAQQFQQELYGRIFRG 662
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
+PY++YVR + + +AG+LD LVYRKRLRRPL++YQRNVPPHVRAAR ADE N + GRP
Sbjct: 663 QPYRDYVRHYVQQTLAGDLDNLLVYRKRLRRPLADYQRNVPPHVRAARQADEYNSRLGRP 722
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
QYQ G I YV TT GPEP++ +SP+DYEHYL+RQLQPVA+ ILPF+ D+FATL Q
Sbjct: 723 RQYQRGGWISYVITTAGPEPMENLQSPIDYEHYLSRQLQPVADAILPFVGDDFATLTGRQ 782
Query: 780 LGLF 783
L LF
Sbjct: 783 LQLF 786
>ref|ZP_01563692.1| DNA polymerase B region [Burkholderia cenocepacia MC0-3]
gb|EAV58197.1| DNA polymerase B region [Burkholderia cenocepacia MC0-3]
Length = 794
Score = 1061 bits (2743), Expect = 0.0
Identities = 524/788 (66%), Positives = 616/788 (78%), Gaps = 7/788 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAFIPA+Q A+ L GE
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFIPAEQQALAERTLAGEHE 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++PV GLYC+ +R L +KRL GV VYEADV+PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRPVVGLYCKRYRHLSGLQKRLAAAGVDVYEADVQPPDRYAMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
V G +GT+ LKP YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 125 CVAFRGQPGRDGTLTGGELKPSTGYRPALRCVSLDIETSVHGELYSIALEGCGQRQVYML 184
Query: 182 GPENGDASS----LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
GP NGDASS LDF+L+Y SRP +L +LN WF +DPD +IGWN+VQFDLR+L HA
Sbjct: 185 GPPNGDASSGAGALDFDLDYCDSRPAMLARLNDWFDRHDPDAVIGWNLVQFDLRILHAHA 244
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E+Y +PL+LGR S L+WR HG + FFA A GRLI+DGI+ LKSA W F SFSLE V+
Sbjct: 245 EQYGIPLKLGRGGSALDWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWTFPSFSLEYVS 304
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q LLGEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+
Sbjct: 305 QSLLGEGKSIDNPYQRMDEIQRRFEHDKPALARYNLKDCELVTRIFDKADLLSFALERAS 364
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GL DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV
Sbjct: 365 VTGLAADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLV 424
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
DYKSLYPSIIRTFLIDPVGL+EG+A P + S GFL A FSR HCLP+IV +W GR
Sbjct: 425 FDYKSLYPSIIRTFLIDPVGLIEGLANPGDDASVPGFLGARFSRTAHCLPDIVRRVWEGR 484
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
D+AKRQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQ
Sbjct: 485 DDAKRQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRTLIEAQ 544
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
GY+VIYGDTDSTFVWL AH ++EA GRALV+HVN WW L++Q L SALEL+YE
Sbjct: 545 GYEVIYGDTDSTFVWLGRAHDDDEAGAKGRALVEHVNRWWHAHLREQFGLDSALELQYER 604
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RFLMPT+RGA+ GSKKRYAGL D + +VFKGLETVRTDWTPLAQQFQ+ELY R
Sbjct: 605 HYRRFLMPTVRGAEEGSKKRYAGLAATADGGEDLVFKGLETVRTDWTPLAQQFQRELYRR 664
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+FR EPYQ+++R+ + + +AGE D +LVYRKR+RRPL EY+RNVPPHVRAAR+ADE NQ
Sbjct: 665 VFRREPYQDFIRDYVRRTLAGEFDDQLVYRKRVRRPLREYERNVPPHVRAARIADEFNQA 724
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
+GRPLQYQ G I YV TT GPEPL+ RSP+DY YL+RQLQPVA+ ILPF+ D+F +
Sbjct: 725 QGRPLQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYLSRQLQPVADAILPFLRDDFERV 784
Query: 776 MTGQLGLF 783
++GQ LF
Sbjct: 785 ISGQGQLF 792
>ref|ZP_00978320.1| COG0417: DNA polymerase elongation subunit (family B) [Burkholderia
cenocepacia PC184]
Length = 794
Score = 1059 bits (2739), Expect = 0.0
Identities = 523/788 (66%), Positives = 617/788 (78%), Gaps = 7/788 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAFIPA+Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFIPAEQQALAERALAGERE 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++PV GLYC+ +R L +KRL GV VYEADV+PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRPVVGLYCKRYRHLSGLQKRLAAAGVDVYEADVQPPDRYAMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
V G +GT+ LKP YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 125 CVAFRGQPGRDGTLTGGELKPATGYRPALRCVSLDIETSVHGELYSIALEGCGQRQVYML 184
Query: 182 GPENGDAS----SLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
GP NGDAS +LDF+L+Y SRP +L +LN WF +DPD +IGWN+VQFDLR+L HA
Sbjct: 185 GPPNGDASGSAGALDFDLDYCDSRPAMLARLNDWFDRHDPDAVIGWNLVQFDLRILHAHA 244
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E+Y +PL+LGR S L+WR HG + FFA A GRLI+DGI+ LKSA W F SFSLE V+
Sbjct: 245 EQYGIPLKLGRGGSVLDWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWTFPSFSLEYVS 304
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q LLGEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+
Sbjct: 305 QSLLGEGKSIDNPYQRMDEIQRRFEHDKPALARYNLKDCELVTRIFDKADLLSFALERAS 364
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GL VDR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV
Sbjct: 365 VTGLAVDRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLV 424
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
DYKSLYPSIIRTFLIDPVGL+EG+A P + S GFL A FSR HCLP+IV +W GR
Sbjct: 425 FDYKSLYPSIIRTFLIDPVGLIEGLANPGDDASVPGFLGARFSRTAHCLPDIVRRVWEGR 484
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
D+AKRQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQ
Sbjct: 485 DDAKRQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRKLIEAQ 544
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
GY+VIYGDTDSTFVWL AH ++EA GRALV+HVN WW L++Q L SALEL+YE
Sbjct: 545 GYEVIYGDTDSTFVWLGRAHDDDEAGAKGRALVEHVNRWWHAHLREQFGLDSALELQYER 604
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RFLMPT+RGA+ GSKKRYAGL D + +VFKGLETVRTDWTPLAQQFQ+ELY R
Sbjct: 605 HYRRFLMPTVRGAEEGSKKRYAGLAATADGGEDLVFKGLETVRTDWTPLAQQFQRELYRR 664
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+FR EPYQ+++R+ + + +AGE D +LVYRKR+RRPL EY+RNVPPHVRAAR+ADE N
Sbjct: 665 VFRREPYQDFIRDYVRRTLAGEFDDQLVYRKRVRRPLREYERNVPPHVRAARIADEFNHA 724
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
+GRPLQYQ G I YV TT GPEPL+ RSP+DY YL+RQLQPVA+ ILPF+ D+F +
Sbjct: 725 QGRPLQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYLSRQLQPVADAILPFLRDDFERV 784
Query: 776 MTGQLGLF 783
++GQ LF
Sbjct: 785 ISGQRQLF 792
>ref|YP_624860.1| DNA polymerase B region [Burkholderia cenocepacia AU 1054]
ref|YP_839474.1| DNA polymerase B region [Burkholderia cenocepacia HI2424]
gb|ABF79887.1| DNA polymerase B region [Burkholderia cenocepacia AU 1054]
gb|ABK12581.1| DNA polymerase B region [Burkholderia cenocepacia HI2424]
Length = 794
Score = 1055 bits (2728), Expect = 0.0
Identities = 522/788 (66%), Positives = 615/788 (78%), Gaps = 7/788 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAFIPA+Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFIPAEQQALAERALAGERE 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++PV GLYC+ +R L +KRL GV VYEADV+PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRPVVGLYCKRYRHLSGLQKRLAAAGVDVYEADVQPPDRYAMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
V G +GT+ LKP YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 125 CVAFRGQPGRDGTLTGGELKPATGYRPALRCVSLDIETSVHGELYSIALEGCGQRQVYML 184
Query: 182 GPENGDAS----SLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
GP NG AS +LDF+L+Y SRP +L +LN WF +DPD +IGWN+VQFDLR+L HA
Sbjct: 185 GPPNGGASGSAGTLDFDLDYCDSRPAMLARLNDWFDRHDPDAVIGWNLVQFDLRILHAHA 244
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E+Y +PL+LGR S L+WR HG + FFA A GRLI+DGI+ LKSA W F SFSLE V+
Sbjct: 245 EQYGIPLKLGRGGSALDWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWTFPSFSLEYVS 304
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q LLGEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+
Sbjct: 305 QSLLGEGKSIDNPYQRMDEIQRRFEHDKPALARYNLKDCELVTRIFDKADLLSFALERAS 364
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GL DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV
Sbjct: 365 VTGLAADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLV 424
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
DYKSLYPSIIRTFLIDPVGL+EG+A P + S GFL A FSR HCLP+IV +W GR
Sbjct: 425 FDYKSLYPSIIRTFLIDPVGLIEGLANPGDDASVPGFLGARFSRTAHCLPDIVRRVWEGR 484
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
D+AKRQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQ
Sbjct: 485 DDAKRQHNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRTLIEAQ 544
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
GY+VIYGDTDSTFVWL AH ++EA GRALV+HVN WW L++Q L SALEL+YE
Sbjct: 545 GYEVIYGDTDSTFVWLGRAHDDDEAGAKGRALVEHVNRWWHVHLREQFGLDSALELQYER 604
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RFLMPT+RGA+ GSKKRYAGL D + +VFKGLETVRTDWTPLAQQFQ+ELY R
Sbjct: 605 HYRRFLMPTVRGAEEGSKKRYAGLAATADGGEDLVFKGLETVRTDWTPLAQQFQRELYRR 664
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+FR EPYQ++VR+ + + +AGE D +LVYRKR+RRPL EY+RNVPPHVRAAR+ADE N
Sbjct: 665 VFRREPYQDFVRDYVRRTLAGEFDDQLVYRKRVRRPLREYERNVPPHVRAARIADEFNHA 724
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
+GRPLQYQ G I YV TT GPEPL+ RSP+DY YL+RQLQPVA+ ILPF+ D+F +
Sbjct: 725 QGRPLQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYLSRQLQPVADAILPFLRDDFERV 784
Query: 776 MTGQLGLF 783
++GQ LF
Sbjct: 785 ISGQGQLF 792
>ref|ZP_01568337.1| DNA polymerase B region [Burkholderia multivorans ATCC 17616]
gb|EAV67382.1| DNA polymerase B region [Burkholderia multivorans ATCC 17616]
Length = 791
Score = 1053 bits (2724), Expect = 0.0
Identities = 521/785 (66%), Positives = 617/785 (78%), Gaps = 4/785 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G EV FWLAT++GP +V L PQE+VAF+PA+Q P A+ +L GE+
Sbjct: 5 EQGFILTRHWRDTSAGVEVEFWLATEHGPRRVRLRPQEAVAFVPAEQQPLAERVLAGERD 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++ V GLYCR +R L +KRL GV VYEADV+PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRKRAVVGLYCRRYRHLTALQKRLAAAGVDVYEADVQPPDRYTMERFITA 124
Query: 123 PVWVEGDMHNG-TIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G + T+V+A LK DYRP L+ VS+DIET+ HG+LY I LEGCGQR V+ML
Sbjct: 125 PVRFRGRPGDARTLVDAELKAATDYRPALRCVSLDIETSVHGDLYSIALEGCGQRQVFML 184
Query: 182 GPENGDASSL-DFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
GP NGDA+ DF L+Y R +L +LN WF +DPD IIGWN+VQFDLR+L HAE+
Sbjct: 185 GPPNGDAAEARDFGLDYCDDRATMLARLNDWFDAHDPDAIIGWNLVQFDLRVLHAHAEQL 244
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
+PL+LGR S L+WR HG + FFA A GRLI+DGI+ LKSA W+F SFSLE VAQ+L
Sbjct: 245 GVPLKLGRGGSVLDWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWSFPSFSLEYVAQQL 304
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERATV G
Sbjct: 305 LGEGKSIDNPYQRMDEIQRRFDHDKPALARYNLKDCELVTRIFAKADLLSFALERATVTG 364
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
L DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV DY
Sbjct: 365 LAADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLVFDY 424
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480
KSLYPSIIRTFLIDPVGL+EG+A PD + S GFL A FSR HCLP+IV +W GRD+A
Sbjct: 425 KSLYPSIIRTFLIDPVGLIEGLAHPDDDASVPGFLGARFSRTAHCLPDIVRRVWEGRDDA 484
Query: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540
KRQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQG+D
Sbjct: 485 KRQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQGFD 544
Query: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFC 599
VIYGDTDSTFVWL AH ++EAA+ GRALV HVN WW L+++ L SALEL+YE H+
Sbjct: 545 VIYGDTDSTFVWLGRAHDDDEAARKGRALVAHVNGWWRTHLRERFGLDSALELQYERHYR 604
Query: 600 RFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFR 658
RFLMPT+RGA+ GSKKRYAGL D + +VFKGLETVRTDWTPLAQQFQ+ELY R+FR
Sbjct: 605 RFLMPTVRGAEEGSKKRYAGLAAAADGSEDLVFKGLETVRTDWTPLAQQFQRELYRRVFR 664
Query: 659 NEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGR 718
EPY++++R+ + + +AGE DA LVYRKR+RRPL EYQRNVPPHVRAAR+ADE NQ GR
Sbjct: 665 REPYRDFIRDYVQRTLAGEFDALLVYRKRVRRPLREYQRNVPPHVRAARIADEFNQANGR 724
Query: 719 PLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTG 778
PLQYQ G I YV TT GPEPL+ +P+DY Y++RQLQPVA+ ILPF+ D+F +++G
Sbjct: 725 PLQYQRGGWISYVMTTAGPEPLEATHAPIDYAFYVSRQLQPVADAILPFLRDDFERVVSG 784
Query: 779 QLGLF 783
Q LF
Sbjct: 785 QGQLF 789
>ref|ZP_00422403.1| DNA polymerase B, exonuclease:DNA polymerase B region [Burkholderia
vietnamiensis G4]
gb|EAM30979.1| DNA polymerase B, exonuclease:DNA polymerase B region [Burkholderia
vietnamiensis G4]
Length = 788
Score = 1050 bits (2716), Expect = 0.0
Identities = 519/784 (66%), Positives = 613/784 (78%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAF+PA Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFVPAQQQALAERALAGERD 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
PLAL+DF ++PV GLYCR +R L +KRL GV VYEADV+PP+RY MERFIT+
Sbjct: 65 AEWRPLALRDFRQRPVAGLYCRRYRHLSALQKRLASAGVDVYEADVQPPDRYTMERFITA 124
Query: 123 PVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G + +GT+ + LKP DYRP L+ VS+DIET+ +GELY I LEGCGQR VYML
Sbjct: 125 PVLFRGAVAADGTLTDGELKPAADYRPTLRCVSLDIETSVNGELYSIALEGCGQRQVYML 184
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDA ++DF L+Y SR +LL +LN WFA +DPD ++GWN+VQFDLR+L HA++Y
Sbjct: 185 GPPNGDARAIDFRLDYCDSRAELLARLNDWFAEHDPDAVLGWNLVQFDLRILHAHAQQYG 244
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+ L+LGR S LEWR HG + FFA A GRLI+DGI+ LKSA W F SFSLE V+Q LL
Sbjct: 245 VALKLGRGGSLLEWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWTFPSFSLEYVSQALL 304
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERATV GL
Sbjct: 305 GEGKSIDNPYQRMDEIQRRFDHDKPALAHYNLKDCELVTRIFAKADLLSFALERATVTGL 364
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV DYK
Sbjct: 365 AADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLVFDYK 424
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDP GL+EG+A PD S GFL A FSR HCLP+IV + GRDEAK
Sbjct: 425 SLYPSIIRTFLIDPAGLIEGLAHPDDAASVPGFLGARFSRTAHCLPDIVRRVSEGRDEAK 484
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
R+ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQGY+V
Sbjct: 485 RRRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQGYEV 544
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCR 600
IYGDTDSTFVWL AH ++ AA GRALV VN WW L ++ L SALEL+YE H+ R
Sbjct: 545 IYGDTDSTFVWLGRAHDDDAAATTGRALVAQVNNWWRTHLRERYGLDSALELQYERHYHR 604
Query: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPT+RGA+ GSKKRYAGL + D +VFKGLETVRTDWTPLAQ FQ+ELY R+F+
Sbjct: 605 FLMPTVRGAEEGSKKRYAGLARAADGGDDLVFKGLETVRTDWTPLAQTFQRELYRRVFKR 664
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPYQ+++R+ + + +AGE DA+L+YRKRLRRPLSEYQRNVPPHVRAAR+ADE NQ RGRP
Sbjct: 665 EPYQDFIRDYVRRTLAGEYDAQLIYRKRLRRPLSEYQRNVPPHVRAARIADEFNQARGRP 724
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ G I YV TT GPEPL+ RSP+DY Y++RQLQPVA+ ILPF+ D+F +++GQ
Sbjct: 725 LQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYVSRQLQPVADAILPFLRDDFERVISGQ 784
Query: 780 LGLF 783
LF
Sbjct: 785 GQLF 788
>gb|EAH89442.1| unknown [environmental sequence]
Length = 794
Score = 1048 bits (2711), Expect = 0.0
Identities = 517/788 (65%), Positives = 614/788 (77%), Gaps = 7/788 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAFIPA+Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFIPAEQQALAERALAGERE 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++PV GLYC+ +R L +KRL GV VYEADV+PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRPVVGLYCKRYRHLSGLQKRLAAAGVDVYEADVQPPDRYAMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
V G +GT+ A LK YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 125 CVQFRGQPDRDGTLTGAELKTATGYRPALRCVSLDIETSVHGELYSIALEGCGQRQVYML 184
Query: 182 GPENG----DASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
GP NG +A+++DF L+Y SRP +L +LN WF +DPD +IGWN+VQFDLR+L H+
Sbjct: 185 GPPNGADSDEANAIDFRLDYCDSRPAMLARLNEWFDEHDPDAVIGWNLVQFDLRILHAHS 244
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E+Y +PL+LGR S L+WR HG + FFA A GRLI+DGI+ LKSA W F SFSLE V+
Sbjct: 245 EQYGIPLKLGRGGSVLDWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWTFPSFSLEYVS 304
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q LLGEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+
Sbjct: 305 QALLGEGKSIDNPYQRMDEIQRRFDHDKPALARYNLKDCELVTRIFDKADLLSFALERAS 364
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GL DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV
Sbjct: 365 VTGLAADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLV 424
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
DYKSLYPSIIRTFLIDPVGL+EG+A P + S GFL A FSR HCLP++V +W GR
Sbjct: 425 FDYKSLYPSIIRTFLIDPVGLIEGLANPGDDASVPGFLGARFSRTAHCLPDVVRRVWEGR 484
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
D AKRQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQ
Sbjct: 485 DVAKRQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQ 544
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
GY+VIYGDTDSTFVWL AH ++EA GRALV+HVN WW L++ L SALEL+YE
Sbjct: 545 GYEVIYGDTDSTFVWLGRAHDDDEAGAKGRALVEHVNRWWQTHLRETFGLESALELQYER 604
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RFLMPT+RGA+ GSKKRYAGL D + +VFKGLETVRTDWTPLAQQFQ+ELY R
Sbjct: 605 HYRRFLMPTVRGAEEGSKKRYAGLAAAADGGEDLVFKGLETVRTDWTPLAQQFQRELYRR 664
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+F EPYQ+++R+T+ + +AGE D +LVYRKR+RRPL EY+RNVPPHVRAAR+ADE NQ
Sbjct: 665 VFSREPYQDFIRDTVRRTLAGEFDDQLVYRKRVRRPLREYERNVPPHVRAARIADEFNQA 724
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
+GRPLQYQ G I YV TT GPEPL+ RSP+DY YL+RQLQPVA+ ILPF+ D+F +
Sbjct: 725 QGRPLQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYLSRQLQPVADAILPFLRDDFERV 784
Query: 776 MTGQLGLF 783
++GQ LF
Sbjct: 785 ISGQGQLF 792
>ref|YP_373756.1| DNA polymerase B [Burkholderia sp. 383]
gb|ABB13112.1| DNA polymerase B [Burkholderia sp. 383]
Length = 793
Score = 1046 bits (2706), Expect = 0.0
Identities = 516/788 (65%), Positives = 611/788 (77%), Gaps = 7/788 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAFIPA+Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFIPAEQQALAERALAGERE 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++PV GLYC+ +R L +KRL G+ VYEADV+PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRPVVGLYCKRYRHLSGLQKRLAAAGIDVYEADVQPPDRYAMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
V G +GT+ A LK YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 125 CVEFRGQPGRDGTLTGAELKTATGYRPALRCVSLDIETSVHGELYSIALEGCGQRQVYML 184
Query: 182 GPENGD----ASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
GP NGD A + DF L+Y +RP +L +LN WF +DPD +IGWN+VQFDLR+L H+
Sbjct: 185 GPPNGDDSDEARASDFRLDYCDNRPAMLARLNEWFDEHDPDAVIGWNLVQFDLRILHAHS 244
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E+Y +PL+LGR L+WR HG + FFA A GRLI+DGI+ LKSA W F SFSLE V+
Sbjct: 245 EQYGIPLKLGRGGGVLDWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWTFPSFSLEYVS 304
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q LLGEGKSIDNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+
Sbjct: 305 QALLGEGKSIDNPYQRMDEIQRRFDHDKPALARYNLKDCELVTRIFDKADLLSFALERAS 364
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GL DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV
Sbjct: 365 VTGLAADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLV 424
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
DYKSLYPSIIRTFLIDPVGL+EG+A P + S GFL A FSR HCLP+IV +W GR
Sbjct: 425 FDYKSLYPSIIRTFLIDPVGLIEGLANPGDDASVPGFLGARFSRTAHCLPDIVRRVWEGR 484
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
D+AKRQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQ
Sbjct: 485 DDAKRQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQ 544
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
GY+VIYGDTDSTFVWL AH ++EA GRALV+HVN WW L+ L SALEL+YE
Sbjct: 545 GYEVIYGDTDSTFVWLGRAHDDDEAGAKGRALVEHVNRWWQAHLRDHFGLDSALELQYER 604
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RFLMPT+RGA+ GSKKRYAGL D + +VFKGLETVRTDWTPLAQQFQ+ELY R
Sbjct: 605 HYRRFLMPTVRGAEEGSKKRYAGLAASADGGEDLVFKGLETVRTDWTPLAQQFQRELYRR 664
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+F EPYQ+++R+T+ + +AGE D +LVYRKR+RRPL EY+RNVPPHVRAAR+ADE NQ
Sbjct: 665 VFNREPYQDFIRDTVRRTLAGEFDDQLVYRKRVRRPLREYERNVPPHVRAARIADEFNQA 724
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
+GRPLQYQ G I YV TT GPEPL+ RSP+DY YL+RQLQPVA+ ILPF+ D+F +
Sbjct: 725 QGRPLQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYLSRQLQPVADAILPFLRDDFERV 784
Query: 776 MTGQLGLF 783
++GQ LF
Sbjct: 785 ISGQGQLF 792
>ref|ZP_01555899.1| DNA polymerase B region [Burkholderia ambifaria MC40-6]
gb|EAV51637.1| DNA polymerase B region [Burkholderia ambifaria MC40-6]
Length = 788
Score = 1046 bits (2704), Expect = 0.0
Identities = 513/784 (65%), Positives = 612/784 (78%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAF+PA+Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFVPAEQQALAERTLAGERD 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++ V GLYCR +R L +KRL GV VYEAD++PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRAVAGLYCRRYRNLSGLQKRLAAAGVDVYEADIQPPDRYTMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G +GT+ + LKP YRP L+ VS+DIET+ HGELY I LEGCGQR VYML
Sbjct: 125 PVLCRGTAGRDGTLTDGELKPATGYRPTLRCVSLDIETSVHGELYSIALEGCGQRQVYML 184
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDA ++DF L+Y +RP++L +LN WF +DPD +IGWN+VQFDLR+L HAE+Y
Sbjct: 185 GPPNGDAPAVDFNLDYCDNRPEMLTRLNDWFGTHDPDAVIGWNLVQFDLRILHAHAEQYG 244
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL+LGR S LEWR HG + FFA A GRLI+DGI+ LKSA W+F SFSLE V+Q LL
Sbjct: 245 VPLKLGRGGSVLEWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWSFPSFSLEYVSQSLL 304
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK++DNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+V GL
Sbjct: 305 GEGKAVDNPYQRMDEIQRRFDHDKPALAHYNLKDCELVTRIFEKADLLSFALERASVTGL 364
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF +LY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV DYK
Sbjct: 365 AADRTGGSVAAFTNLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLVFDYK 424
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDP GL+EG+A P + S GFL A FSR HCLP+IV + GRDEAK
Sbjct: 425 SLYPSIIRTFLIDPAGLIEGLAHPSDDASVPGFLGARFSRTAHCLPDIVRRVSEGRDEAK 484
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
RQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQGY+V
Sbjct: 485 RQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQGYEV 544
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL H ++ AA GRALV+ VN WW L+ + L SALEL+YE H+ R
Sbjct: 545 IYGDTDSTFVWLGREHGDDAAAAKGRALVEQVNRWWQAHLRDRFGLESALELQYERHYRR 604
Query: 601 FLMPTIRGADTGSKKRYAGL-IQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPT+RGA+ GSKKRYAGL + +VFKGLETVRTDWTPLAQ FQ+ELY R+F+
Sbjct: 605 FLMPTVRGAEEGSKKRYAGLAVTANGDDDLVFKGLETVRTDWTPLAQVFQRELYRRVFKR 664
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPYQE++R+ + + +AGE DA+L+YRKR+RRPLSEYQRNVPPHVRAAR+ADE NQ RGRP
Sbjct: 665 EPYQEFIRDYVRRTLAGEYDAQLIYRKRVRRPLSEYQRNVPPHVRAARIADEFNQARGRP 724
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ G I YV TT GPEPL+ RSP+DY Y++RQLQPVA ILPF+ D+F +++GQ
Sbjct: 725 LQYQRGGWISYVMTTAGPEPLETTRSPIDYAFYVSRQLQPVAGAILPFLRDDFERVISGQ 784
Query: 780 LGLF 783
LF
Sbjct: 785 GQLF 788
>ref|YP_776967.1| DNA polymerase B region [Burkholderia cepacia AMMD]
gb|ABI90633.1| DNA polymerase B region [Burkholderia cepacia AMMD]
Length = 788
Score = 1046 bits (2704), Expect = 0.0
Identities = 512/784 (65%), Positives = 613/784 (78%), Gaps = 3/784 (0%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GFILTRHWRDT G E+ FWLAT++GP +V L PQE+VAF+PA+Q A+ L GE+
Sbjct: 5 EQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFVPAEQQALAERTLAGERD 64
Query: 63 FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122
L PLAL+DF ++ V GLYCR +R L +KRL G+ VYEAD++PP+RY MERFIT+
Sbjct: 65 AELRPLALRDFRQRAVAGLYCRRYRNLSGLQKRLAAAGIDVYEADIQPPDRYTMERFITA 124
Query: 123 PVWVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181
PV G +GT+ + LKP YRP L+ VS+DIET+ HGELY I LEGCGQR VY L
Sbjct: 125 PVLFRGTAGRDGTLTDGELKPATGYRPTLRCVSLDIETSVHGELYSIALEGCGQRQVYRL 184
Query: 182 GPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241
GP NGDA ++DF L+Y +R ++L +LN WF +DPD +IGWNVVQFDLR+L HAE+Y
Sbjct: 185 GPPNGDAPAVDFNLDYCDNRAEMLMRLNDWFGAHDPDAVIGWNVVQFDLRILHAHAEQYG 244
Query: 242 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301
+PL+LGR S LEWR HG + FFA A GRLI+DGI+ LKSA W+F SFSLE V+Q LL
Sbjct: 245 VPLKLGRGGSVLEWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWSFPSFSLEYVSQSLL 304
Query: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361
GEGK++DNP+ RMDEI RRF DKPALA YNLKDCELVT+IF K +++ F LERA+V GL
Sbjct: 305 GEGKAVDNPYQRMDEIQRRFDHDKPALAHYNLKDCELVTRIFEKADLLSFALERASVTGL 364
Query: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421
DR GGSVAAF HLY PRMHR GYVAPNLG+V SPGG+VMDSRPGLYDSVLV DYK
Sbjct: 365 AADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLVFDYK 424
Query: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481
SLYPSIIRTFLIDPVGL+EG+A P + S GFL A FSR HCLP+IV + GRDEAK
Sbjct: 425 SLYPSIIRTFLIDPVGLIEGLAHPSDDASVPGFLGARFSRTAHCLPDIVRRVSEGRDEAK 484
Query: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541
RQ N PLSQALKIIMN+FYGVLG+T CRFFDPRLASSITMRGH+IM +T+ LIEAQGY+V
Sbjct: 485 RQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQGYEV 544
Query: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600
IYGDTDSTFVWL H ++ AA GRALV+ VN WW L+ + L SALEL+YE H+ R
Sbjct: 545 IYGDTDSTFVWLGREHDDDAAATKGRALVEQVNRWWQTHLRDRFGLESALELQYERHYRR 604
Query: 601 FLMPTIRGADTGSKKRYAGL-IQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659
FLMPT+RGA+ GSKKRYAGL + + +VFKGLETVRTDWTPLAQ FQ+ELY R+F+
Sbjct: 605 FLMPTVRGAEEGSKKRYAGLAVAANGDEDLVFKGLETVRTDWTPLAQLFQRELYRRVFKR 664
Query: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719
EPYQ+++R+ + + +AGE DA+L+YRKR+RRPLSEYQRNVPPHVRAAR+ADE NQ RGRP
Sbjct: 665 EPYQDFIRDYVRRTLAGEYDAQLIYRKRVRRPLSEYQRNVPPHVRAARIADEFNQARGRP 724
Query: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779
LQYQ G I YV TT GPEPL+ RSP+DY Y++RQLQPVA+ ILPF+ D+F +++GQ
Sbjct: 725 LQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYVSRQLQPVADAILPFLRDDFERVISGQ 784
Query: 780 LGLF 783
LF
Sbjct: 785 GQLF 788
>gb|AAG43149.1|AF063187_1 DNA polymerase II [Pseudomonas fluorescens]
Length = 774
Score = 1000 bits (2586), Expect = 0.0
Identities = 494/728 (67%), Positives = 582/728 (79%), Gaps = 4/728 (0%)
Query: 59 GEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMER 118
G + L PLAL+DF +PV GLYC+ H QLM E L V V+EADVRPPERYLMER
Sbjct: 48 GRKNVELRPLALQDFEHRPVLGLYCQQHGQLMRLETALNRHSVDVFEADVRPPERYLMER 107
Query: 119 FITSPVWVEGDMH-NGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRI 177
FIT+PVW G +G + +A LKP PDYRP L+ VS+DIETT GELY I LEGCG+R
Sbjct: 108 FITAPVWFSGTPDADGVLFDAHLKPAPDYRPQLRLVSLDIETTEQGELYSIALEGCGERQ 167
Query: 178 VYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
VYMLG NGD S +DF+LEY SR +L+KLN WFA +DPD IIGWN+VQFDLR+L KHA
Sbjct: 168 VYMLGAPNGDHSIVDFDLEYCESRTLILKKLNDWFARHDPDAIIGWNLVQFDLRILHKHA 227
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
R +PL+LGR E++WREHG + +FA A GRLIIDGIE+L+SA W+F SFSLE VA
Sbjct: 228 RRLGVPLKLGRGGEEMQWREHGSRTH-YFAAAAGRLIIDGIESLRSATWSFPSFSLENVA 286
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
Q LLGEGKSIDNP+ RMDEI+R FAEDKPALA YNLKDCELVT+IF TE++ FLLERA+
Sbjct: 287 QTLLGEGKSIDNPYQRMDEINRMFAEDKPALAKYNLKDCELVTRIFAMTELLKFLLERAS 346
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
V GLP DR GGSVAAF HLY P MHR G+VAPNLG PP ASPGG+VMDS+PGLY+SVLV
Sbjct: 347 VTGLPADRSGGSVAAFTHLYMPLMHRQGFVAPNLGTNPPQASPGGFVMDSQPGLYESVLV 406
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGR 477
LDYKSLYPSIIRTFLIDPVGL+EG+ PD S GF A FSR +HCLP IV + GR
Sbjct: 407 LDYKSLYPSIIRTFLIDPVGLIEGLQHPDDSDSVPGFRGARFSRTRHCLPSIVARVAEGR 466
Query: 478 DEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQ 537
+ AKR+ N PLSQALKIIMNAFYGVLG++ CRF D RLASSIT+RGH+IM +T+ LIEAQ
Sbjct: 467 ETAKREHNAPLSQALKIIMNAFYGVLGSSGCRFLDTRLASSITLRGHEIMLRTRQLIEAQ 526
Query: 538 GYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYET 596
G+ VIYGDTDSTFVWL+ +H +EEAA+IGRALVQHVN WW E +++Q L SALEL++ET
Sbjct: 527 GHAVIYGDTDSTFVWLRRSHGQEEAAQIGRALVQHVNDWWREHVREQYGLESALELQFET 586
Query: 597 HFCRFLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
H+ RFLMPTIRGA+ GSKKRYAGL+ D + M +KGLETVRTDW+ LA+QFQQELY R
Sbjct: 587 HYKRFLMPTIRGAEEGSKKRYAGLVTRADGSEEMFYKGLETVRTDWSLLARQFQQELYER 646
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
IF+ +PYQ+YVRE + K +AGE D RLVYRKRLRR L +Y+RNVPPHVRAARLAD+ N +
Sbjct: 647 IFQRKPYQDYVREYVRKTLAGEFDERLVYRKRLRRTLDDYERNVPPHVRAARLADDYNAQ 706
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
GRP QYQN G I YV T GPEPL+ +R+ +DY+HY+TRQLQPVA+ ILPF++D+F+TL
Sbjct: 707 HGRPRQYQNGGWISYVITLAGPEPLEVRRAAIDYDHYITRQLQPVADAILPFVDDDFSTL 766
Query: 776 MTGQLGLF 783
+ GQLGLF
Sbjct: 767 IGGQLGLF 774
>gb|AAA23684.1| DNA polymerase II
Length = 458
Score = 945 bits (2442), Expect = 0.0
Identities = 455/458 (99%), Positives = 456/458 (99%)
Query: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE
Sbjct: 1 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE 60
Query: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI
Sbjct: 61 QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
Query: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM
Sbjct: 121 TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
Query: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY
Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240
Query: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300
RLPLRLGRDNSELEWR+ GFKNGVFFAQAKG LIIDGIEALKSAFWNFSSFSLETVAQEL
Sbjct: 241 RLPLRLGRDNSELEWRDDGFKNGVFFAQAKGGLIIDGIEALKSAFWNFSSFSLETVAQEL 300
Query: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG
Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360
Query: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY
Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420
Query: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAW 458
KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAW
Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAW 458
>ref|ZP_01521594.1| DNA polymerase B region [Comamonas testosteroni KF-1]
gb|EAV13514.1| DNA polymerase B region [Comamonas testosteroni KF-1]
Length = 791
Score = 887 bits (2292), Expect = 0.0
Identities = 433/783 (55%), Positives = 572/783 (73%), Gaps = 4/783 (0%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFR 64
GFILTR+WRDTP G E +WLATD+GPL+V L Q SVAF+ + L G
Sbjct: 8 GFILTRNWRDTPAGAEFEYWLATDDGPLKVLLTAQTSVAFVESRHRAAVDAQLSTLPGVE 67
Query: 65 LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124
L L+L+ F ++PV G+Y R RQL E+ L++ G+ + EADVRP ER+LMERFIT+ V
Sbjct: 68 LRNLSLRSFQQEPVLGIYARNFRQLRRLERTLQQQGIPLLEADVRPHERHLMERFITAGV 127
Query: 125 WVEGDM-HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLG- 182
V+G N +++ RL P PD+RP LK VS+DIET++H +LY I L+G +R+V+MLG
Sbjct: 128 TVQGGRTENAALLDCRLAPAPDFRPALKVVSLDIETSQHQDLYSIALDGMAERMVFMLGQ 187
Query: 183 PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRL 242
P + + F L Y +SR +++++LN WFA DPDVI+GWNV+QFDLR+LQK A+ +
Sbjct: 188 PSSEPEPTTGFALVYCSSRQEMIKQLNDWFARNDPDVIVGWNVIQFDLRVLQKTADDCGI 247
Query: 243 PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLG 302
PL GR+ + + WR H K G FA GR +IDGIEAL++A W+FSSFSLE V+QELLG
Sbjct: 248 PLLPGRERTPIAWRTHPGKQGYLFAPMPGRAVIDGIEALRAAVWSFSSFSLENVSQELLG 307
Query: 303 EGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLP 362
EGK I + +D+M EI+RR+ +DKPALA+YNL+DCELV +IF K +++ F +ERA GLP
Sbjct: 308 EGKEIGDEYDKMAEIERRYQQDKPALASYNLRDCELVLRIFEKAKLLQFAMERAHATGLP 367
Query: 363 VDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKS 422
+D GGS+A+F H Y PRMHR GYVAPN+G++ +SPGGYV+DSRPG YDSV+VLDYKS
Sbjct: 368 LDHFGGSIASFSHHYLPRMHRLGYVAPNVGDIQGKSSPGGYVLDSRPGFYDSVVVLDYKS 427
Query: 423 LYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKR 482
LYPSIIRTFL+DPVGL EG+ D + +G L FSREKH LPEIVT +W RDEAKR
Sbjct: 428 LYPSIIRTFLVDPVGLAEGLHARDSQGLIKGPLGTLFSREKHALPEIVTRLWRARDEAKR 487
Query: 483 QGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVI 542
N+PLSQALK++MN+F GVLG + CRFF+P+L S+IT+RGH++++ T+ L+E +GY+VI
Sbjct: 488 AKNEPLSQALKLVMNSFAGVLGASECRFFNPKLISAITLRGHEMVKLTRDLVEQRGYEVI 547
Query: 543 YGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALELEYETHFCRF 601
YGDTDS F+WL+ H+ EEA + L + +NAWW +TL Q+Q L S LE+E++TH+ +F
Sbjct: 548 YGDTDSIFIWLRRTHTNEEAHAVAAELARDINAWWTQTLRQEQDLESFLEIEFDTHYKKF 607
Query: 602 LMPTIRGADTGSKKRYAGL-IQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE 660
MPTIRG+D GSKKRYAGL I K+ M+++GLE R+DWTPLA+QFQ+ L R+F+
Sbjct: 608 FMPTIRGSDVGSKKRYAGLSIDLDGKEAMIYRGLEMARSDWTPLARQFQEGLLSRVFQAA 667
Query: 661 PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL 720
PY+E+V E +AG D L+YRKRLR L Y NVPP VRAAR+ADE N + GRP
Sbjct: 668 PYREFVIEYARATLAGRKDELLIYRKRLRHRLDAYVSNVPPQVRAARIADEYNDRMGRPR 727
Query: 721 QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL 780
QYQN G I+Y+ T NGPEPL+ +RS +DYEHYL +Q++P+A+ IL + ++F TL + Q
Sbjct: 728 QYQNGGWIQYLMTQNGPEPLEVRRSRIDYEHYLAKQIKPIADSILLPLGEDFTTLTSPQR 787
Query: 781 GLF 783
LF
Sbjct: 788 ELF 790
>ref|NP_761852.1| DNA polymerase II [Vibrio vulnificus CMCP6]
gb|AAO11379.1|AE016807_98 DNA polymerase elongation subunit [Vibrio vulnificus CMCP6]
Length = 789
Score = 811 bits (2094), Expect = 0.0
Identities = 419/790 (53%), Positives = 542/790 (68%), Gaps = 17/790 (2%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG-- 62
GF+LTRH RD GT++ WL+T++GP Q+ + ++ V FI Q AQ +
Sbjct: 6 GFVLTRHARDRFSGTQIELWLSTEDGPHQLLIDGEKPVFFIDDTQREDAQRLASEHHPDV 65
Query: 63 -FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121
PL LKDF P+ YC+ +R L + +TV E+D+R +RYLMERFI
Sbjct: 66 KVEFKPLPLKDFSHTPMAACYCQTNRDAYTLSSLLTQHDITVLESDIRLADRYLMERFIR 125
Query: 122 SPVWVEGDMHNGT----IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRI 177
+ G + NA+ + DY P LK VS+D+E + G LY IGL+
Sbjct: 126 GSLAFTGTFKTQNAHVQVTNAKCR-QGDYTPTLKMVSLDLECSEKGILYSIGLDSPMDSR 184
Query: 178 VYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
V M+G + + D +++V QLL L AWF +DPDVI+GWNV+ FD R+LQK A
Sbjct: 185 VIMIG----EPEAADTPIQWVQDEKQLLLALIAWFEQFDPDVIVGWNVIDFDFRLLQKRA 240
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E ++L L LGR N +R F GR+++DGI+ LK+A ++F S+SLE+V+
Sbjct: 241 EWHQLKLTLGRGNQTSYFRSSSQSQQAFIT-IPGRVVLDGIDTLKTATYHFRSWSLESVS 299
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
+ELLGEGK+I N DRM EI+ F DKP+LA YNL+DC LV +IF T ++ +++ER+
Sbjct: 300 RELLGEGKAIHNVHDRMAEINHMFRHDKPSLAKYNLQDCVLVNRIFAHTHLLEYVIERSK 359
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
+ G+ +DR GGSVAAF +LY P++HRAGY+APNL ASPGGYVMDS PGLYDSVLV
Sbjct: 360 LTGVELDRVGGSVAAFTNLYLPQLHRAGYIAPNLQPENWVASPGGYVMDSLPGLYDSVLV 419
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPD---PEHSTEGFLDAWFSREKHCLPEIVTNIW 474
LD+KSLYPSIIR+FLIDP+GLVEG+ P + GF F R KH LPE++ +W
Sbjct: 420 LDFKSLYPSIIRSFLIDPLGLVEGLKLESGKAPHQAVPGFRGGQFHRTKHFLPEMIETLW 479
Query: 475 HGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALI 534
H RD AKR +K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM+QTK LI
Sbjct: 480 HARDVAKRNNDKAFSQAIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLI 539
Query: 535 EAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELE 593
E QGY VIYGDTDSTFV L G + EA IGR LV +N WW + L+++ L S LELE
Sbjct: 540 EQQGYQVIYGDTDSTFVSLNGRFEQPEADAIGRQLVSLINQWWKQHLEQEFNLNSILELE 599
Query: 594 YETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELY 653
YETH+ +FLMPTIRGA+TGSKKRYAGLIQ+G ++R+VFKGLE+ RTDWTPLAQ+FQ +LY
Sbjct: 600 YETHYRKFLMPTIRGAETGSKKRYAGLIQQGSEERIVFKGLESARTDWTPLAQRFQHQLY 659
Query: 654 LRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEEN 713
+ IF ++ +YVRE +++ AG D LVY+KRLRR LS+YQ+NVPP VRAAR+ADE N
Sbjct: 660 MMIFHDQDPTDYVREMVEQTRAGAFDDELVYQKRLRRKLSDYQKNVPPQVRAARMADEIN 719
Query: 714 QKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFA 773
+ GRPLQYQNR I+Y+ T NGPEP +YQ S +DY+HY+ +QL+PVA+ ILPFI +F+
Sbjct: 720 ARLGRPLQYQNRARIEYLITLNGPEPKEYQSSAIDYQHYVDKQLKPVADAILPFIGKDFS 779
Query: 774 TLMTGQLGLF 783
L QLGLF
Sbjct: 780 QLADAQLGLF 789
>ref|NP_934025.1| DNA polymerase II [Vibrio vulnificus YJ016]
dbj|BAC93996.1| DNA polymerase elongation subunit [Vibrio vulnificus YJ016]
Length = 789
Score = 807 bits (2084), Expect = 0.0
Identities = 417/790 (52%), Positives = 539/790 (68%), Gaps = 17/790 (2%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG-- 62
GF+LTRH RD GT++ WL+T++GP Q+ + ++ V FI Q AQ +
Sbjct: 6 GFVLTRHARDRFSGTQIELWLSTEDGPHQLLIDGEKPVFFIDDTQREDAQRLASEHHPDV 65
Query: 63 -FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121
PL LKDF P+ YC +R L + +TV E+D+R +RYLMERFI
Sbjct: 66 KVEFKPLPLKDFSHNPMAACYCETNRDAYTLSSLLTQHDITVLESDIRLADRYLMERFIR 125
Query: 122 SPVWVEGDMHNGT----IVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRI 177
+ G + NA+ + DY P L VS+D+E + G LY IGL+
Sbjct: 126 GSLAFTGTFKTQNAHVQVTNAKCR-QGDYTPTLNVVSLDLECSEKGILYSIGLDSPMDSR 184
Query: 178 VYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHA 237
V M+G + + D +++V QLL L AWF +DPDV++GWNV+ FD R+LQK A
Sbjct: 185 VIMIG----EPEAADTPIQWVQDEKQLLLALIAWFEQFDPDVVVGWNVIDFDFRLLQKRA 240
Query: 238 ERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVA 297
E ++L L LGR N +R F GR+++DGI+ LK+A ++F S+SLE+V+
Sbjct: 241 EWHQLKLTLGRGNQTSYFRSSSQSQQAFIT-IPGRVVLDGIDTLKTATYHFRSWSLESVS 299
Query: 298 QELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERAT 357
+ELLGEGK+I N DRM EI+ F DKP+LA YNL+DC LV +IF T ++ +++ER+
Sbjct: 300 RELLGEGKAIHNVHDRMAEINHMFRHDKPSLAKYNLQDCVLVNRIFAHTHLLEYVIERSK 359
Query: 358 VNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLV 417
+ G+ +DR GGSVAAF +LY P++HRAGY+APNL ASPGGYVMDS PGLYDSVLV
Sbjct: 360 LTGVELDRVGGSVAAFTNLYLPQLHRAGYIAPNLQPENWVASPGGYVMDSLPGLYDSVLV 419
Query: 418 LDYKSLYPSIIRTFLIDPVGLVEGMAQPD---PEHSTEGFLDAWFSREKHCLPEIVTNIW 474
LD+KSLYPSIIR+FLIDP+GLVEG+ P + GF F R KH LPE++ +W
Sbjct: 420 LDFKSLYPSIIRSFLIDPLGLVEGLKLESGKAPHQAVPGFRGGQFHRTKHFLPEMIETLW 479
Query: 475 HGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALI 534
H RD AKR +K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM+QTK LI
Sbjct: 480 HARDVAKRNNDKAFSQAIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKLLI 539
Query: 535 EAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELE 593
E QGY VIYGDTDSTFV L G + EA IGR LV +N WW L+++ L S LELE
Sbjct: 540 EQQGYQVIYGDTDSTFVSLNGRFEQPEADAIGRQLVSLINQWWKHHLEQEFNLNSILELE 599
Query: 594 YETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELY 653
YETH+ +FLMPTIRGA+TGSKKRYAGLIQ+G ++R+VFKGLE+ RTDWTPLAQ+FQ +LY
Sbjct: 600 YETHYRKFLMPTIRGAETGSKKRYAGLIQQGSEERIVFKGLESARTDWTPLAQRFQHQLY 659
Query: 654 LRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEEN 713
+ IF ++ +YVRE +++ AG D LVY+KRLRR LS+YQ+NVPP VRAAR+ADE N
Sbjct: 660 MMIFHDQDPTDYVREMVEQTRAGAFDDELVYQKRLRRKLSDYQKNVPPQVRAARMADEIN 719
Query: 714 QKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFA 773
+ GRPLQYQNR I+Y+ T NGPEP +YQ S +DY+HY+ +QL+PVA+ ILPFI +F+
Sbjct: 720 ARLGRPLQYQNRARIEYLITLNGPEPKEYQSSAIDYQHYVDKQLKPVADAILPFIGKDFS 779
Query: 774 TLMTGQLGLF 783
L QLGLF
Sbjct: 780 QLSDSQLGLF 789
>gb|EAY32799.1| DNA polymerase II [Vibrio cholerae 1587]
Length = 787
Score = 804 bits (2076), Expect = 0.0
Identities = 420/794 (52%), Positives = 550/794 (69%), Gaps = 23/794 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GF+LTRH RD T++ WLAT +GP Q+T+ + V FI + +Q +++
Sbjct: 4 EQGFVLTRHARDVAGQTQIELWLATPSGPTQLTVRGERPVFFI---EQSASQEVMRIAAE 60
Query: 63 FRLTP----LALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMER 118
+TP L+L+ F QP+ YC R ++L + + + EAD+R +R+LMER
Sbjct: 61 LSITPSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLTQADMLILEADIRLADRFLMER 120
Query: 119 FITSPVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCG 174
FI + G + H + A+ + DY P L VS+DIE + G LY IGL+
Sbjct: 121 FIQGSIEFTGQITDSGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPM 179
Query: 175 QRIVYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRML 233
V M+G PE + +++V QLL+ L AWF +DPDVIIGW+VV FD R+L
Sbjct: 180 DSRVIMVGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLL 234
Query: 234 QKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSL 293
K AE ++L L +GR +R + F GR+++DGI+ LK+A ++F S+SL
Sbjct: 235 HKRAEFHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSL 293
Query: 294 ETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLL 353
E+V+QELLGEGK+I N DRMDEI++ F DKP+LA YNL+DC LV +IF T ++ F +
Sbjct: 294 ESVSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCALVNKIFAATHLLDFAI 353
Query: 354 ERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYD 413
+R+ + G+ +DR GGSVAAF +LY P++HRAGYVAPNL ASPGGYVMDS PGLYD
Sbjct: 354 QRSRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYD 413
Query: 414 SVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIV 470
SVLVLD+KSLYPSIIR+FLIDP+GL+EG+ P +H+ GF F R KH LPE++
Sbjct: 414 SVLVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMI 473
Query: 471 TNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQT 530
+W RDEAKR K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM QT
Sbjct: 474 EKLWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQT 533
Query: 531 KALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSA 589
K LIEA+GY VIYGDTDSTFV L G +S++EA IG ALV+ +N WW E L Q+ LTS
Sbjct: 534 KRLIEARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSI 593
Query: 590 LELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQ 649
LELEYETH+ RFLMPTIRG++TGSKKRYAGL +GD ++++FKGLE+ RTDWTPLAQ+FQ
Sbjct: 594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQ 653
Query: 650 QELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 709
+LY IF + + Y+R +++ +AG+LD +LVY+KRLRR L EYQ+NVPP VRAAR+A
Sbjct: 654 HQLYQLIFHRQDPESYIRTIVEQTLAGQLDEQLVYQKRLRRRLHEYQKNVPPQVRAARMA 713
Query: 710 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIE 769
D+ N K GRPLQYQ RGTI+YV T NGPEP +Y +SP+DY+HY+ +QL+PVA+ ILPFI
Sbjct: 714 DDINAKLGRPLQYQYRGTIEYVMTVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIG 773
Query: 770 DNFATLMTGQLGLF 783
F L+ QLGLF
Sbjct: 774 KQFDELIAPQLGLF 787
>ref|NP_230857.1| DNA polymerase II [Vibrio cholerae O1 biovar eltor str. N16961]
ref|ZP_01477756.1| hypothetical protein VchoM_02003106 [Vibrio cholerae MO10]
ref|ZP_01678840.1| DNA polymerase II [Vibrio cholerae 2740-80]
ref|ZP_01682306.1| DNA polymerase II [Vibrio cholerae V52]
gb|AAF94371.1| DNA polymerase II [Vibrio cholerae O1 biovar eltor str. N16961]
gb|EAX56761.1| DNA polymerase II [Vibrio cholerae 2740-80]
gb|EAX60887.1| DNA polymerase II [Vibrio cholerae V52]
gb|EAY36355.1| DNA polymerase II [Vibrio cholerae MAK 757]
Length = 787
Score = 803 bits (2074), Expect = 0.0
Identities = 420/794 (52%), Positives = 550/794 (69%), Gaps = 23/794 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GF+LTRH RD T++ WLAT +GP Q+T+ + V FI + +Q +++
Sbjct: 4 EQGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFI---EQSASQEVMRIAAE 60
Query: 63 FRLTP----LALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMER 118
+TP L+L+ F QP+ YC R ++L + + + EAD+R +R+LMER
Sbjct: 61 LSITPSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMER 120
Query: 119 FITSPVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCG 174
FI + G + H + A+ + DY P L VS+DIE + G LY IGL+
Sbjct: 121 FIQGSIEFTGQITDFGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPM 179
Query: 175 QRIVYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRML 233
V M+G PE + +++V QLL+ L AWF +DPDVIIGW+VV FD R+L
Sbjct: 180 DSRVIMIGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLL 234
Query: 234 QKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSL 293
K AE ++L L +GR +R + F GR+++DGI+ LK+A ++F S+SL
Sbjct: 235 HKRAEFHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSL 293
Query: 294 ETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLL 353
E+V+QELLGEGK+I N DRMDEI++ F DKP+LA YNL+DC LV +IF T ++ F +
Sbjct: 294 ESVSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAI 353
Query: 354 ERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYD 413
+R+ + G+ +DR GGSVAAF +LY P++HRAGYVAPNL ASPGGYVMDS PGLYD
Sbjct: 354 QRSRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYD 413
Query: 414 SVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIV 470
SVLVLD+KSLYPSIIR+FLIDP+GL+EG+ P +H+ GF F R KH LPE++
Sbjct: 414 SVLVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMI 473
Query: 471 TNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQT 530
+W RDEAKR K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM QT
Sbjct: 474 EKLWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQT 533
Query: 531 KALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSA 589
K LIEA+GY VIYGDTDSTFV L G +S++EA IG ALV+ +N WW E L Q+ LTS
Sbjct: 534 KRLIEARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSI 593
Query: 590 LELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQ 649
LELEYETH+ RFLMPTIRG++TGSKKRYAGL +GD ++++FKGLE+ RTDWTPLAQ+FQ
Sbjct: 594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQ 653
Query: 650 QELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 709
+LY IF + + Y+R +++ +AG+LD +LVY+KRLRR L EYQ+NVPP VRAAR+A
Sbjct: 654 HQLYQLIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMA 713
Query: 710 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIE 769
D+ N K GRPLQYQ RGTI+YV T NGPEP +Y +SP+DY+HY+ +QL+PVA+ ILPFI
Sbjct: 714 DDINAKLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIG 773
Query: 770 DNFATLMTGQLGLF 783
F L+ QLGLF
Sbjct: 774 KQFDELIAPQLGLF 787
>ref|NP_798325.1| DNA polymerase II [Vibrio parahaemolyticus RIMD 2210633]
dbj|BAC60209.1| DNA polymerase II [Vibrio parahaemolyticus RIMD 2210633]
Length = 787
Score = 800 bits (2065), Expect = 0.0
Identities = 416/791 (52%), Positives = 548/791 (69%), Gaps = 17/791 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHI-LQGEQ 61
Q GF+LTR RD T++ WLAT+ GP Q+ + ++ V FI + + + Q++ L
Sbjct: 4 QQGFLLTRQARDIKGQTQIELWLATEAGPTQLLINGEKPVFFIAQEYIEQTQNLALSKSI 63
Query: 62 GFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121
+ L LK F P+ Y + ++ + + L + + YE D+R +RYLMERFI
Sbjct: 64 QVEIRTLELKTFEHTPLAACYTKVTKEALVLQDLLSQQDIVTYEGDIRLADRYLMERFIK 123
Query: 122 SPVWVEGDMH--NG--TIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRI 177
V G NG I NA+ + DY P L VS+D+E + G LY IGL+
Sbjct: 124 GSVEFTGHQQSRNGFHRIQNAKCRSG-DYEPKLHVVSLDLECSEKGILYSIGLDSPHDSR 182
Query: 178 VYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKH 236
V M+G PE + + +++V + LLE L AWF ++DPDVI+GWNV+ FD R+L K
Sbjct: 183 VIMIGEPEPAETN-----IQWVQNEKALLEALIAWFKSFDPDVIVGWNVIDFDFRLLHKR 237
Query: 237 AERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETV 296
AE + + L LGR + +R ++ F GR+++DGI+ LK+A ++F S+SLE+V
Sbjct: 238 AEWHNMKLMLGRADQPSFFRSSS-QSQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESV 296
Query: 297 AQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERA 356
+QELLGEGK I N DRMDEI+R + DKP+LA YNL+DC LV +IF T ++ F +ER+
Sbjct: 297 SQELLGEGKEIHNVHDRMDEINRMYRSDKPSLAKYNLQDCVLVNKIFEHTHLLAFAIERS 356
Query: 357 TVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVL 416
+ G+ +DR GGSVAAF +LY P++HRAGYVAPNL ASPGGYVMDS P LYDSVL
Sbjct: 357 RLTGVELDRVGGSVAAFTNLYLPQIHRAGYVAPNLHPENWIASPGGYVMDSIPNLYDSVL 416
Query: 417 VLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIVTNI 473
VLD+KSLYPSIIR+FLIDP+GLVEG+ D + + GF F R KH LPE++ +
Sbjct: 417 VLDFKSLYPSIIRSFLIDPMGLVEGLLLDIGKDDDQAVPGFRGGQFHRSKHFLPEMIEKL 476
Query: 474 WHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKAL 533
W RD AK+ K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM+QTK L
Sbjct: 477 WAARDVAKKNNEKAFSQAIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVL 536
Query: 534 IEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALEL 592
IE +GY VIYGDTDSTFV L G++S+ EA ++G LV+++N+WW E L+ + LTS LE+
Sbjct: 537 IENKGYQVIYGDTDSTFVSLNGSYSQAEADEVGNHLVEYINSWWQEHLRAEYNLTSMLEI 596
Query: 593 EYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQEL 652
EYETH+ +FLMPTIRGA+TGSKKRYAGLI EG+++R+VFKGLE+ RTDWTPLAQ+FQ L
Sbjct: 597 EYETHYRKFLMPTIRGAETGSKKRYAGLIGEGEQERIVFKGLESARTDWTPLAQKFQNTL 656
Query: 653 YLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEE 712
Y +F E +YVRE ++K GE D +LVY+KRLRR L EYQ+N+PP VRAARLAD+
Sbjct: 657 YRMVFHGEDPSDYVREVVEKTNNGEFDDQLVYQKRLRRKLHEYQKNIPPQVRAARLADDI 716
Query: 713 NQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNF 772
N K GRPLQYQNRG I+Y+ T NGPEP +Y+ SP+DY+HY+ +QL+PVA+ ILPFI +F
Sbjct: 717 NAKLGRPLQYQNRGRIEYLITLNGPEPHEYRNSPIDYQHYIDKQLKPVADAILPFIGTDF 776
Query: 773 ATLMTGQLGLF 783
TL Q+GLF
Sbjct: 777 ETLSAPQMGLF 787
>gb|EAY39695.1| DNA polymerase II [Vibrio cholerae MZO-3]
Length = 787
Score = 798 bits (2061), Expect = 0.0
Identities = 419/792 (52%), Positives = 544/792 (68%), Gaps = 19/792 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GF+LTRH RD T++ WLAT +GP Q+T+ + V FI I E
Sbjct: 4 EQGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSASQEVMRIA-AELS 62
Query: 63 FR--LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
L+PL+L+ F QP+ YC R ++L + G+ + EAD+R +R+LMERFI
Sbjct: 63 ITPSLSPLSLRSFAGQPLTACYCNTIRDSQILAEKLAQAGMLILEADIRLADRFLMERFI 122
Query: 121 TSPVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQR 176
+ G + H + A+ + DY P L VS+DIE + G LY IGL+
Sbjct: 123 QGSIEFTGQITDFGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPMDS 181
Query: 177 IVYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQK 235
V M+G PE + +++V QLL+ L AWF +DPDVIIGW+VV FD R+L K
Sbjct: 182 RVIMVGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHK 236
Query: 236 HAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLET 295
AE ++L L +GR +R + F GR+++DGI+ LK+A ++F S+SLE+
Sbjct: 237 RAEFHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSLES 295
Query: 296 VAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLER 355
V+QELLGEGK+I N DRMDEI++ F DKP+LA YNL+DC LV +IF T ++ F ++R
Sbjct: 296 VSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQR 355
Query: 356 ATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSV 415
+ + G+ +DR GGSVAAF +LY P++HRAGYVAPNL ASPGGYVMDS PGLYDSV
Sbjct: 356 SRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSV 415
Query: 416 LVLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIVTN 472
LVLD+KSLYPSIIR+FLIDP+GL+EG+ P +H+ GF F R KH LPE++
Sbjct: 416 LVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEK 475
Query: 473 IWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKA 532
+W RDEAKR K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM QTK
Sbjct: 476 LWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKR 535
Query: 533 LIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALE 591
LIEA+GY VIYGDTDSTFV L G +S++EA IG ALV +N WW LQ++ LTS LE
Sbjct: 536 LIEARGYQVIYGDTDSTFVALGGQYSQQEADAIGNALVSEINQWWTAHLQQEYALTSILE 595
Query: 592 LEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQE 651
LEYETH+ RFLMPTIRG++TGSKKRYAGL + ++++FKGLE+ RTDWTPLAQ+FQ +
Sbjct: 596 LEYETHYRRFLMPTIRGSETGSKKRYAGLKGDDGNEQLIFKGLESARTDWTPLAQRFQHQ 655
Query: 652 LYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADE 711
LY IF + + Y+R +++ +AG+LD +LVY+KRLRR L EYQ+NVPP VRAAR+AD+
Sbjct: 656 LYQLIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMADD 715
Query: 712 ENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDN 771
N K GRPLQYQ RGTI+YV T NGPEP +Y +SP+DY+HY+ +QL+PVA+ ILPFI
Sbjct: 716 INAKLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQ 775
Query: 772 FATLMTGQLGLF 783
F L+ QLGLF
Sbjct: 776 FDELIAPQLGLF 787
>ref|ZP_00756048.1| COG0417: DNA polymerase elongation subunit (family B) [Vibrio
cholerae O395]
Length = 787
Score = 798 bits (2061), Expect = 0.0
Identities = 417/794 (52%), Positives = 548/794 (69%), Gaps = 23/794 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GF+LTRH RD T++ WLAT +GP Q+T+ + V FI + +Q +++
Sbjct: 4 EQGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFI---EQSASQEVMRIAAE 60
Query: 63 FRLTP----LALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMER 118
+TP L+L+ F QP+ YC R ++L + + + EAD+R +R+LMER
Sbjct: 61 LSITPSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMER 120
Query: 119 FITSPVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCG 174
FI + G + H + A+ + DY P L VS+DIE + G LY IGL+
Sbjct: 121 FIQGSIEFTGQITDFGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPM 179
Query: 175 QRIVYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRML 233
V M+G PE + +++V QLL+ L AWF +DPDVIIGW+VV FD R+L
Sbjct: 180 DSRVIMIGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLL 234
Query: 234 QKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSL 293
K AE ++L L +GR +R + F GR+++DGI+ LK+A ++F S+SL
Sbjct: 235 HKRAEFHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSL 293
Query: 294 ETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLL 353
E+V+QELLGEGK+I N DRMDEI++ F DKP+LA YNL+DC LV +IF T ++ F +
Sbjct: 294 ESVSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAI 353
Query: 354 ERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYD 413
+R+ + G+ +DR GGSVAAF +LY P++HRAGYVAPNL ASPGGYVMDS PGLYD
Sbjct: 354 QRSRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYD 413
Query: 414 SVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIV 470
SVLVLD+KSLYPSIIR+FLIDP+GL+EG+ P +H+ GF F R KH LPE++
Sbjct: 414 SVLVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMI 473
Query: 471 TNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQT 530
+W RDEAKR K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM QT
Sbjct: 474 EKLWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQT 533
Query: 531 KALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSA 589
K LIEA+GY VIYGDTDSTFV L G +S++EA IG ALV +N WW E L Q+ L S
Sbjct: 534 KRLIEARGYQVIYGDTDSTFVALGGQYSQQEADAIGNALVSEINQWWTEHLKQEYALASI 593
Query: 590 LELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQ 649
LELEYETH+ RFLMPTIRG++TGSKKRYAGL +GD ++++FKGLE+ RTDWTPLAQ+FQ
Sbjct: 594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQ 653
Query: 650 QELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 709
+LY IF + + Y+R +++ +AG+LD +LVY+KRLRR L EYQ+NVPP VRAAR+A
Sbjct: 654 HQLYQLIFHGQDPESYIRTIVEQTLAGQLDEQLVYQKRLRRRLHEYQKNVPPQVRAARMA 713
Query: 710 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIE 769
D+ N K GRPLQYQ RG+I+Y+ T NGPEP +Y +SP+DY+HY+ +QL+PVA+ ILPFI
Sbjct: 714 DDINAKLGRPLQYQYRGSIEYLITVNGPEPKEYSKSPMDYQHYIDKQLKPVADAILPFIG 773
Query: 770 DNFATLMTGQLGLF 783
F L+ QLGLF
Sbjct: 774 KQFDELIAPQLGLF 787
>ref|ZP_01481657.1| hypothetical protein VchoR_02002443 [Vibrio cholerae RC385]
Length = 787
Score = 798 bits (2060), Expect = 0.0
Identities = 419/792 (52%), Positives = 544/792 (68%), Gaps = 19/792 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62
+ GF+LTRH RD T++ WLAT +GP Q+ + + V FI I E
Sbjct: 4 EQGFVLTRHARDVAGQTQIELWLATPSGPTQLIIRGERPVFFIEQSASQEVMRIA-AELS 62
Query: 63 FR--LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI 120
L+PL+L+ F P+ YC R ++L + + + EAD+R +R+LMERFI
Sbjct: 63 ITPSLSPLSLRSFAGHPLTACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMERFI 122
Query: 121 TSPVWVEGDM----HNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQR 176
+ G + H + A+ + DY P L VS+DIE + G LY IGL+
Sbjct: 123 QGSIEFTGQITDFGHYRQVQQAKCR-QGDYLPTLNMVSLDIECSEKGLLYSIGLDSPMDS 181
Query: 177 IVYMLG-PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQK 235
V M+G PE + +++V QLL+ L AWF +DPDVIIGW+VV FD R+L K
Sbjct: 182 RVIMVGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHK 236
Query: 236 HAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLET 295
AE ++L L +GR +R + F GR+++DGI+ LK+A ++F S+SLE+
Sbjct: 237 RAEFHKLKLTIGRVQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSLES 295
Query: 296 VAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLER 355
V+QELLGEGK+I N DRMDEI++ F DKP+LA YNL+DC LV +IF T ++ F ++R
Sbjct: 296 VSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQR 355
Query: 356 ATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSV 415
+ + G+ +DR GGSVAAF +LY P++HRAGYVAPNL ASPGGYVMDS PGLYDSV
Sbjct: 356 SRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSV 415
Query: 416 LVLDYKSLYPSIIRTFLIDPVGLVEGMAQP---DPEHSTEGFLDAWFSREKHCLPEIVTN 472
LVLD+KSLYPSIIR+FLIDP+GL+EG+ P +H+ GF F R KH LPE++
Sbjct: 416 LVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEK 475
Query: 473 IWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKA 532
+W RDEAKR K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM QTK
Sbjct: 476 LWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKR 535
Query: 533 LIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETL-QKQRLTSALE 591
LIEA+GY VIYGDTDSTFV L G +S++EA IG ALV+ +N WW E L Q+ LTS LE
Sbjct: 536 LIEARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILE 595
Query: 592 LEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQE 651
LEYETH+ RFLMPTIRG++TGSKKRYAGL +GD ++++FKGLE+ RTDWTPLAQ+FQ +
Sbjct: 596 LEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQHQ 655
Query: 652 LYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADE 711
LY IF + + Y+R +++ +AG+LD +LVY+KRLRR L EYQ+NVPP VRAAR+AD+
Sbjct: 656 LYQLIFHRQNPESYIRTIVEQTLAGQLDEQLVYQKRLRRRLHEYQKNVPPQVRAARMADD 715
Query: 712 ENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDN 771
N K GRPLQYQ RGTI+YV T NGPEP +Y +SP+DY+HY+ +QL+PVA+ ILPFI
Sbjct: 716 INAKLGRPLQYQYRGTIEYVITINGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQ 775
Query: 772 FATLMTGQLGLF 783
F L+ QLGLF
Sbjct: 776 FDELIAPQLGLF 787
>ref|ZP_01234586.1| DNA polymerase II [Vibrio angustum S14]
gb|EAS64790.1| DNA polymerase II [Vibrio angustum S14]
Length = 794
Score = 796 bits (2056), Expect = 0.0
Identities = 415/788 (52%), Positives = 540/788 (68%), Gaps = 9/788 (1%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQ-GF 63
GF+LTR RD TE+ W+ T+NGP ++++ + V F+ +Q +AQ +L
Sbjct: 7 GFVLTRQSRDINGQTEIILWVKTENGPYRLSIIGDKPVFFVRTEQKAQAQQVLTSANITT 66
Query: 64 RLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSP 123
L LK F V YC+ R + K L + V+E+D+R +RYLMERF+
Sbjct: 67 EWKDLPLKTFQHHVVSACYCQTIRDGFSAVKALSAELIDVFESDIRLADRYLMERFVRGG 126
Query: 124 VWVEGDMH--NGTIVNARLKPHP-DYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
+ GD +G I + K P DY P L VS+DIE + G LY IGL V M
Sbjct: 127 LVFTGDQRQRSGHIEVTKTKVKPVDYVPTLNVVSLDIECSEKGVLYSIGLHSDADSRVIM 186
Query: 181 LGPE-NGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAER 239
+G +G S + +E+V + LL+ L +WF +DPDVIIGWNV+ FD R+L AE
Sbjct: 187 VGQAPDGYCDSSELFIEWVENEKALLQSLESWFMAFDPDVIIGWNVIDFDFRLLLHRAEW 246
Query: 240 YRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQE 299
++ LR+GR +R F GR+++DGI+ LK+A +NF S+SLE+V+QE
Sbjct: 247 NKVNLRIGRGRQTPHYRPSSQNPNQGFITVPGRVVMDGIDTLKTATYNFRSWSLESVSQE 306
Query: 300 LLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVN 359
LLGEGK+I N DRM EI+ F DK +LA YNL+DCELVT+IF T ++ F +ER +
Sbjct: 307 LLGEGKAIHNVHDRMAEINHMFRHDKLSLAKYNLQDCELVTRIFEHTHLLDFAIERCRLT 366
Query: 360 GLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLD 419
G+ +DR GGSVAAF +LY P++HRAGY+APNL ASPGGYVMDS+PGLYDSVLVLD
Sbjct: 367 GVELDRVGGSVAAFTNLYMPQLHRAGYIAPNLVSDNWIASPGGYVMDSKPGLYDSVLVLD 426
Query: 420 YKSLYPSIIRTFLIDPVGLVEGMAQPD--PEH-STEGFLDAWFSREKHCLPEIVTNIWHG 476
+KSLYPSIIR+F IDP+GLVEG+ Q + EH + GF F R KH LP+++ ++W
Sbjct: 427 FKSLYPSIIRSFRIDPMGLVEGLNQEEGKAEHQAINGFRGGRFHRTKHFLPKMIEDLWAA 486
Query: 477 RDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEA 536
RD+AKR G K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM+ T+ LIE
Sbjct: 487 RDQAKRDGEKAFSQAIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKLTRELIET 546
Query: 537 QGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYE 595
+GY+VIYGDTDSTFV LK HS+++A IG LV ++N WW L+ + LTSALE+EYE
Sbjct: 547 KGYEVIYGDTDSTFVSLKKGHSQDDANAIGNDLVAYINQWWTAHLRDEYGLTSALEIEYE 606
Query: 596 THFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
TH+ +FLMPTIRG +TGSKKRYAGL+ G K+ +VFKGLETVRTDWTPLAQ FQQ LY
Sbjct: 607 THYHKFLMPTIRGQETGSKKRYAGLVWRGGKEEIVFKGLETVRTDWTPLAQHFQQSLYQM 666
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+F + +YVR+ + +AGE D L+YRKRLRR L++YQ+N+PP VRAARLADE N K
Sbjct: 667 VFHGQDVDDYVRDYTQRTLAGEFDDLLIYRKRLRRNLADYQKNIPPQVRAARLADEMNLK 726
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
GRPLQYQN+GTI+YV+T +G EP +Y++SP+DY HY+ +QL+PVA+GILPFI F +
Sbjct: 727 LGRPLQYQNKGTIEYVFTVSGAEPSEYRQSPIDYNHYIDKQLKPVADGILPFIGKYFDDI 786
Query: 776 MTGQLGLF 783
QLGLF
Sbjct: 787 TAPQLGLF 794
>ref|ZP_01160150.1| DNA polymerase II [Photobacterium sp. SKA34]
gb|EAR56141.1| DNA polymerase II [Photobacterium sp. SKA34]
Length = 794
Score = 796 bits (2055), Expect = 0.0
Identities = 414/788 (52%), Positives = 538/788 (68%), Gaps = 9/788 (1%)
Query: 5 GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQ-GF 63
GF+LTR RD TE+ FW+ T+NGP ++++ + V F+ +Q +AQ +L
Sbjct: 7 GFVLTRQSRDINGQTEIIFWVKTENGPYRLSIIGDKPVFFVRTEQKAQAQQVLTNASITT 66
Query: 64 RLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSP 123
L LK F V YC+ R + K L + V+E+D+R +RYLMERF+
Sbjct: 67 EWKDLPLKTFQHHVVSACYCQTIRDGFSAVKALSAELIDVFESDIRLADRYLMERFVRGG 126
Query: 124 VWVEGDMHN--GTIVNARLKPHP-DYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180
+ GD G I + K P DY P L VS+DIE + G LY IGL V M
Sbjct: 127 LVFTGDQRQRAGHIEVTKTKVKPVDYVPTLSVVSLDIECSEKGVLYSIGLHSDADSRVIM 186
Query: 181 LGPE-NGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAER 239
+G +G + S +E+V + LL+ L +WF +DPDVIIGWNV+ FD R+L AE
Sbjct: 187 VGQAPDGYSDSNKLFIEWVENEKALLQSLESWFMAFDPDVIIGWNVIDFDFRLLLHRAEW 246
Query: 240 YRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQE 299
++ LR+GR +R F GR+++DGI+ LK+A +NF S+SLE+V+QE
Sbjct: 247 NKVNLRIGRGRQTPHYRPSSQNPNQGFITVPGRVVMDGIDTLKTATYNFRSWSLESVSQE 306
Query: 300 LLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVN 359
LLGEGK+I N DRM EI+ F DK +LA YNL+DC LVT+IF T ++ F +ER +
Sbjct: 307 LLGEGKAIHNVHDRMAEINDMFRHDKLSLAKYNLQDCALVTRIFEHTHLLDFAIERCRLT 366
Query: 360 GLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLD 419
G+ +DR GGSVAAF +LY P++HRAGY+APNL ASPGGYVMDS+PGLYDSVLVLD
Sbjct: 367 GVELDRVGGSVAAFTNLYMPQLHRAGYIAPNLVSDNWIASPGGYVMDSKPGLYDSVLVLD 426
Query: 420 YKSLYPSIIRTFLIDPVGLVEGMAQPD---PEHSTEGFLDAWFSREKHCLPEIVTNIWHG 476
+KSLYPSIIR+F IDP+GLVEG+ Q + + GF F R KH LP+++ +W
Sbjct: 427 FKSLYPSIIRSFRIDPMGLVEGLNQDEGKADHQAINGFRGGRFHRTKHFLPKMIEELWAA 486
Query: 477 RDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEA 536
RD+AKR G K SQA+KIIMN+FYGVLG++ CRFFD RLASSITMRGH+IM+ T+ LIEA
Sbjct: 487 RDQAKRDGEKAFSQAIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKLTRELIEA 546
Query: 537 QGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWW-AETLQKQRLTSALELEYE 595
+GY+VIYGDTDSTFV LK AHS+++A IG LV ++N WW A + LTSALE+EYE
Sbjct: 547 KGYEVIYGDTDSTFVSLKKAHSQDDANAIGNDLVAYINQWWTAHLCDEYGLTSALEIEYE 606
Query: 596 THFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLR 655
TH+ +FLMPTIRG +TGSKKRYAGL+ GDK+ +VFKGLETVRTDWTPLAQ FQQ LY
Sbjct: 607 THYHKFLMPTIRGQETGSKKRYAGLVWRGDKEEIVFKGLETVRTDWTPLAQHFQQSLYQM 666
Query: 656 IFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQK 715
+F ++ +YVR+ + +AGE D L+YRKRLRR L++YQ+N+PP VRAARLADE N K
Sbjct: 667 VFHDQDVDDYVRDYTQRTLAGEFDDLLIYRKRLRRNLADYQKNIPPQVRAARLADEMNLK 726
Query: 716 RGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATL 775
GRP QYQN+GTI+Y++T +G EP +Y++SP+DY HY+ +QL+PVA+GILPFI F +
Sbjct: 727 LGRPRQYQNKGTIEYIFTVSGAEPSEYRQSPIDYNHYIDKQLKPVADGILPFIGKYFDDI 786
Query: 776 MTGQLGLF 783
QLGLF
Sbjct: 787 TAPQLGLF 794
>ref|ZP_01067097.1| DNA polymerase II [Vibrio sp. MED222]
gb|EAQ51576.1| DNA polymerase II [Vibrio sp. MED222]
Length = 787
Score = 778 bits (2008), Expect = 0.0
Identities = 405/791 (51%), Positives = 541/791 (68%), Gaps = 17/791 (2%)
Query: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQ- 61
Q GF+LTR RD T++ WL+T GP +T+ ++ V F+ V Q I E
Sbjct: 4 QQGFVLTRQARDFSGRTQIDLWLSTPQGPTLLTIQNEKPVFFVAQTDVEACQAIAAKESI 63
Query: 62 GFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121
+L PL L F + P+ Y R + + +E+D+R +R+LMERFI
Sbjct: 64 NCQLKPLELATFDQTPLAACYTS
