BLAST Search Results

Blast performed on February-13-2007
BLASTP 2.2.13 [Nov-27-2005]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: nr_env 
           5,549,519 sequences; 1,762,256,069 total letters



Query= EG13451 caiF 
         (131 letters)

Distribution of 15 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_687621.1|  transcriptional regulator of cai operon [S...   266   2e-70 
ref|NP_285729.1|  transcriptional regulator of cai operon [E...   266   2e-70 
ref|ZP_00737779.1|  hypothetical protein Ecol5_01000727 [Esc...   266   2e-70 
ref|ZP_00702405.1|  hypothetical protein EcolE_01002419 [Esc...   263   2e-69 
ref|NP_751997.1|  Transcriptional activatory protein caiF [E...   261   6e-69 
ref|ZP_00721221.1|  hypothetical protein EcolF_01003976 [Esc...   261   6e-69 
ref|YP_309072.1|  transcriptional regulator of cai operon [S...   261   1e-68 
ref|YP_401783.1|  transcriptional regulator of cai operon [S...   238   6e-62 
ref|NP_454678.1|  transcriptional activator CaiF [Salmonella...   208   8e-53 
ref|YP_149415.1|  transcriptional activator CaiF [Salmonella...   206   2e-52 
emb|CAD48584.1|  putative transcriptional regulatory protein...   140   2e-32 
ref|NP_945169.1|  hypothetical protein STM3025.1N [Salmonell...    42   0.013 
ref|YP_217951.1|  hypothetical protein SC2964 [Salmonella en...    42   0.013 
ref|YP_152048.1|  hypothetical protein SPA2893 [Salmonella e...    42   0.013 
ref|NP_457420.1|  hypothetical protein STY3173 [Salmonella e...    42   0.013 

>ref|YP_687621.1| transcriptional regulator of cai operon [Shigella flexneri 5 str.
           8401]
 gb|ABF02316.1| transcriptional regulator of cai operon [Shigella flexneri 5 str.
           8401]
          Length = 166

 Score =  266 bits (680), Expect = 2e-70
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK
Sbjct: 36  MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 95

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK
Sbjct: 96  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 155

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 156 WQMMLSKSMRR 166



>ref|NP_285729.1| transcriptional regulator of cai operon [Escherichia coli O157:H7
           EDL933]
 ref|NP_308064.1| transcriptional regulator of cai operon [Escherichia coli O157:H7
           str. Sakai]
 ref|NP_705990.1| transcriptional regulator of cai operon [Shigella flexneri 2a str.
           301]
 ref|NP_835773.1| transcriptional regulator of cai operon [Shigella flexneri 2a str.
           2457T]
 gb|AAG54337.1|AE005180_4 transcriptional regulator of cai operon [Escherichia coli O157:H7
           EDL933]
 dbj|BAB33460.1| transcriptional regulator of cai operon [Escherichia coli O157:H7
           str. Sakai]
 gb|AAN41697.1| transcriptional regulator of cai operon [Shigella flexneri 2a str.
           301]
 gb|AAP15578.1| transcriptional regulator of cai operon [Shigella flexneri 2a str.
           2457T]
          Length = 166

 Score =  266 bits (680), Expect = 2e-70
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK
Sbjct: 36  MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 95

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK
Sbjct: 96  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 155

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 156 WQMMLSKSMRR 166



>ref|ZP_00737779.1| hypothetical protein Ecol5_01000727 [Escherichia coli 53638]
 ref|ZP_00923579.1| hypothetical protein Ecol1_01003881 [Escherichia coli 101-1]
 ref|AP_000698.1| DNA-binding transcriptional activator [Escherichia coli W3110]
 ref|NP_414576.4| DNA-binding transcriptional activator [Escherichia coli K12]
 sp|P0AE58|CAIF_ECOLI Transcriptional activatory protein caiF
 sp|P0AE59|CAIF_SHIFL Transcriptional activatory protein caiF
 emb|CAA56690.1| caiF [Escherichia coli]
 dbj|BAE76036.1| DNA-binding transcriptional activator [Escherichia coli W3110]
 gb|AAC73145.2| DNA-binding transcriptional activator [Escherichia coli K12]
 gb|EAY46139.1| transcriptional regulator of cai operon [Escherichia coli B]
 prf||2209335A transcriptional activator
          Length = 131

 Score =  266 bits (680), Expect = 2e-70
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK
Sbjct: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK
Sbjct: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 121 WQMMLSKSMRR 131



>ref|ZP_00702405.1| hypothetical protein EcolE_01002419 [Escherichia coli E24377A]
 ref|ZP_00704325.1| hypothetical protein EcolH_01000029 [Escherichia coli HS]
 ref|ZP_00709167.1| hypothetical protein EcolB_01003896 [Escherichia coli B171]
 ref|ZP_00714574.1| hypothetical protein EcolB7_01003771 [Escherichia coli B7A]
 ref|ZP_00718559.1| hypothetical protein EcolE1_01003916 [Escherichia coli E110019]
 ref|ZP_00727455.1| hypothetical protein EcolE2_01004278 [Escherichia coli E22]
          Length = 131

 Score =  263 bits (672), Expect = 2e-69
 Identities = 129/131 (98%), Positives = 130/131 (99%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEV EISCEVK
Sbjct: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCEVK 60

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSR+KLVGVRKTPRIPAVPLTELNREQK
Sbjct: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK 120

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 121 WQMMLSKSMRR 131



>ref|NP_751997.1| Transcriptional activatory protein caiF [Escherichia coli CFT073]
 ref|YP_539081.1| transcriptional activatory protein CaiF [Escherichia coli UTI89]
 ref|YP_851238.1| transcriptional regulator of cai operon [Escherichia coli APEC O1]
 gb|AAN78541.1|AE016755_41 Transcriptional activatory protein caiF [Escherichia coli CFT073]
 gb|ABE05550.1| transcriptional activatory protein CaiF [Escherichia coli UTI89]
 gb|ABI99523.1| transcriptional regulator of cai operon [Escherichia coli APEC O1]
          Length = 166

 Score =  261 bits (668), Expect = 6e-69
 Identities = 129/131 (98%), Positives = 130/131 (99%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEG VEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK
Sbjct: 36  MCEGCVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 95

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSR+KLVGVRKTPRIPAVPLTELNREQK
Sbjct: 96  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK 155

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 156 WQMMLSKSMRR 166



>ref|ZP_00721221.1| hypothetical protein EcolF_01003976 [Escherichia coli F11]
 ref|YP_667975.1| transcriptional activatory protein CaiF [Escherichia coli 536]
 gb|ABG68076.1| transcriptional activatory protein CaiF [Escherichia coli 536]
          Length = 131

 Score =  261 bits (668), Expect = 6e-69
 Identities = 129/131 (98%), Positives = 130/131 (99%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEG VEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK
Sbjct: 1   MCEGCVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSR+KLVGVRKTPRIPAVPLTELNREQK
Sbjct: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK 120

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 121 WQMMLSKSMRR 131



>ref|YP_309072.1| transcriptional regulator of cai operon [Shigella sonnei Ss046]
 gb|AAZ86837.1| transcriptional regulator of cai operon [Shigella sonnei Ss046]
          Length = 166

 Score =  261 bits (666), Expect = 1e-68
 Identities = 128/131 (97%), Positives = 129/131 (98%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEV EISC VK
Sbjct: 36  MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCAVK 95

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSR+KLVGVRKTPRIPAVPLTELNREQK
Sbjct: 96  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK 155

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 156 WQMMLSKSMRR 166



>ref|YP_401783.1| transcriptional regulator of cai operon [Shigella dysenteriae
           Sd197]
 gb|ABB60294.1| transcriptional regulator of cai operon [Shigella dysenteriae
           Sd197]
          Length = 153

 Score =  238 bits (608), Expect = 6e-62
 Identities = 117/118 (99%), Positives = 118/118 (100%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVT+ISCEVK
Sbjct: 36  MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTKISCEVK 95

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNRE 118
           MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNRE
Sbjct: 96  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNRE 153



>ref|NP_454678.1| transcriptional activator CaiF [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 ref|NP_459073.1| of cai/fix operon transcriptional regulator [Salmonella typhimurium
           LT2]
 ref|NP_803953.1| transcriptional activator CaiF [Salmonella enterica subsp. enterica
           serovar Typhi Ty2]
 ref|YP_215049.1| transcriptional regulator of cai and fix operon [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 pir||AF0510 transcription activator CaiF STY0078 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gb|AAL19032.1| transcriptional regulator of cai and fix operon [Salmonella
           typhimurium LT2]
 emb|CAD01222.1| transcriptional activator CaiF [Salmonella enterica subsp. enterica
           serovar Typhi]
 gb|AAO67802.1| transcriptional activator CaiF [Salmonella enterica subsp. enterica
           serovar Typhi Ty2]
 gb|AAX63968.1| transcriptional regulator of cai and fix operon [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
          Length = 131

 Score =  208 bits (529), Expect = 8e-53
 Identities = 100/131 (76%), Positives = 112/131 (85%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCE YVE+PLYLLIA+WMMAENRW+ AREIS  FDIEH KA+NTL+YILSEV EI CEVK
Sbjct: 1   MCEKYVERPLYLLIADWMMAENRWITAREISRQFDIEHCKAINTLSYILSEVGEIVCEVK 60

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPN++ GRGCQCQRLVKVV ID Q+Y RL +N +E+ V V K PR+ AVP TELNREQK
Sbjct: 61  MIPNQIAGRGCQCQRLVKVVSIDSQLYRRLNHNLQERKVSVAKAPRLSAVPPTELNREQK 120

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 121 WQMMLSKSMRR 131



>ref|YP_149415.1| transcriptional activator CaiF [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gb|AAV76103.1| transcriptional activator CaiF [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
          Length = 131

 Score =  206 bits (525), Expect = 2e-52
 Identities = 99/131 (75%), Positives = 112/131 (85%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCE YVE+PLYLLIA+WMMAENRW+ AREIS  FDIEH KA+NTL+YILS+V EI CEVK
Sbjct: 1   MCEKYVERPLYLLIADWMMAENRWITAREISRQFDIEHCKAINTLSYILSKVGEIVCEVK 60

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
           MIPN++ GRGCQCQRLVKVV ID Q+Y RL +N +E+ V V K PR+ AVP TELNREQK
Sbjct: 61  MIPNQIAGRGCQCQRLVKVVSIDSQLYRRLNHNLQERKVSVAKAPRLSAVPPTELNREQK 120

Query: 121 WQMMLSKSMRR 131
           WQMMLSKSMRR
Sbjct: 121 WQMMLSKSMRR 131



>emb|CAD48584.1| putative transcriptional regulatory protein [Proteus sp. LE138]
          Length = 130

 Score =  140 bits (354), Expect = 2e-32
 Identities = 67/131 (51%), Positives = 93/131 (70%), Gaps = 1/131 (0%)

Query: 1   MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60
           MCE  + KPLYLLIA+W+  + RWV A+EI+ +FDI    A+N ++YILS+V EI CE K
Sbjct: 1   MCEEDINKPLYLLIADWVQEQQRWVSAKEIAKNFDIPQCNAINIVSYILSDVKEIECETK 60

Query: 61  MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120
            +PN+LEGRGCQCQR++KV  ID  +Y+RL+ +++ K   +    ++ A+    LN +QK
Sbjct: 61  SVPNQLEGRGCQCQRMIKVSHIDPALYSRLKGHTQSK-SRLSAPEKLAAMIPHGLNHQQK 119

Query: 121 WQMMLSKSMRR 131
           WQ MLSKS RR
Sbjct: 120 WQWMLSKSQRR 130



>ref|NP_945169.1| hypothetical protein STM3025.1N [Salmonella typhimurium LT2]
          Length = 170

 Score = 41.6 bits (96), Expect = 0.013
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 5   YVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEI--SCEVKMI 62
           Y  +PLY+++A W + +  WV   +I+  F I   +A   + Y+ S+ + +   C  + +
Sbjct: 39  YAGEPLYIIVAHWCLLQQNWVQRNQIAEAFHITARRASYLIAYLRSKTSRVVSICRHQTL 98

Query: 63  PNK 65
           PNK
Sbjct: 99  PNK 101



>ref|YP_217951.1| hypothetical protein SC2964 [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
 gb|AAX66870.1| hypothetical protein SCH_2964 [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. SC-B67]
          Length = 168

 Score = 41.6 bits (96), Expect = 0.013
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 5  YVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEI--SCEVKMI 62
          Y  +PLY+++A W + +  WV   +I+  F I   +A   + Y+ S+ + +   C  + +
Sbjct: 37 YAGEPLYIIVAHWCLLQQNWVQRNQIAEAFHITARRASYLIAYLRSKTSRVVSICRHQTL 96

Query: 63 PNK 65
          PNK
Sbjct: 97 PNK 99



>ref|YP_152048.1| hypothetical protein SPA2893 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gb|AAV78736.1| hypothetical protein SPA2893 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
          Length = 170

 Score = 41.6 bits (96), Expect = 0.013
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 5   YVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEI--SCEVKMI 62
           Y  +PLY+++A W + +  WV   +I+  F I   +A   + Y+ S+ + +   C  + +
Sbjct: 39  YAGEPLYIIVAHWCLLQQNWVQRNQIAEAFHITARRASYLIAYLRSKTSRVVSICRHQTL 98

Query: 63  PNK 65
           PNK
Sbjct: 99  PNK 101



>ref|NP_457420.1| hypothetical protein STY3173 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 ref|NP_806629.1| hypothetical protein t2936 [Salmonella enterica subsp. enterica
           serovar Typhi Ty2]
 pir||AD0869 hypothetical protein STY3173 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 emb|CAD02852.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
           Typhi]
 gb|AAO70489.1| hypothetical protein t2936 [Salmonella enterica subsp. enterica
           serovar Typhi Ty2]
          Length = 170

 Score = 41.6 bits (96), Expect = 0.013
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 5   YVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEI--SCEVKMI 62
           Y  +PLY+++A W + +  WV   +I+  F I   +A   + Y+ S+ + +   C  + +
Sbjct: 39  YAGEPLYIIVAHWCLLQQNWVQRNQIAEAFHITARRASYLIAYLRSKTSRVVSICRHQTL 98

Query: 63  PNK 65
           PNK
Sbjct: 99  PNK 101




  Database: nr_env
    Posted date:  Feb 10, 2007 10:14 PM
  Number of letters in database: 997,052,372
  Number of sequences in database:  2,947,546
  
  Database: /data/DB/nr_env.01
    Posted date:  Feb 10, 2007 10:24 PM
  Number of letters in database: 765,203,697
  Number of sequences in database:  2,601,973
  
Lambda     K      H
   0.322    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,794,657
Number of Sequences: 5549519
Number of extensions: 14359737
Number of successful extensions: 31150
Number of sequences better than 1.0e-01: 15
Number of HSP's better than  0.1 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 31138
Number of HSP's gapped (non-prelim): 15
length of query: 131
length of database: 1,762,256,069
effective HSP length: 96
effective length of query: 35
effective length of database: 1,229,502,245
effective search space: 43032578575
effective search space used: 43032578575
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 89 (38.9 bits)