GenePage for the yohD gene of Escherichia coli K-12

Primary Gene Name: yohD
EcoGene Accession Number: EG12017
K-12 Gene Accession Number: ECK2129
MG1655 Gene Identifier: b2136
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: None
Description: DedA family inner membrane protein, function unknown
  # bp Upstream # bp Downstream
MW: 21444.60 ---------192 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 2225801
Left Intergenic Region

Name: yohC_yohD

Length: 169 bp gap

Orientation: Divergent

Left_end: 2225632

Right_end: 2225800

Centisome: 47.95

Genomic Address
Clockwise
Minute or Centisome (%) = 47.95
Right End: 2226379
Right Intergenic Region

Name: yohD_yohF

Length: 129 bp gap

Orientation: Convergent

Left_end: 2226380

Right_end: 2226508

Centisome: 47.97

DedA superfamily proteins YqjA and YghB likely have redundant functions since only a double mutant has defects; DedA superfamily members yabI or yohD can complement the yqjA yghB double mutant when overproduced, but a dedA clone cannot complement (Thompkins, 2008). The E. coli K-12 DedA superfamily (SNARE associated Golgi protein/PF09335) has eight paralogs in two families, the COG0586 DedA/YghB family (including the DedA/YabI/YohD subfamily and the general envelope maintenance protein YghB/YqjA subfamily) and the YdjX family (including the COG0398 YdjX/YdjZ subfamily and the COG1238 YqaA subfamily) (Doerrler, 2013; K.E.R.).

Go to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePageGo to GenePage

BamHI EcoRI HindIII