GenePage for the ybiT gene of Escherichia coli K-12

Primary Gene Name: ybiT
EcoGene Accession Number: EG13325
K-12 Gene Accession Number: ECK0810
MG1655 Gene Identifier: b0820
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: None
Description: ABC-F family putative regulatory ATPase, function unknown
  # bp Upstream # bp Downstream
MW: 59858.00 ---------530 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 855963
Left Intergenic Region

Name: ldtB_ybiT

Length: 218 bp gap

Orientation: Divergent

Left_end: 855745

Right_end: 855962

Centisome: 18.44

Genomic Address
Clockwise
Minute or Centisome (%) = 18.44
Right End: 857555
Right Intergenic Region

Name: ybiT_ybiU

Length: 240 bp gap

Orientation: Convergent

Left_end: 857556

Right_end: 857795

Centisome: 18.48

YbiT is a procaryotic ABC-F family member defined by two ABC transporter-related predicted ATP-binding domains (Pfam:PF0005) joined by a linker domain (Pfam: PF12848); other ABC-F family members include eucaryotic translation-related factors and the E. coli K-12 proteins EttA, Uup, and YheS (Boël, 2014; Chen, 2014). The E. chrysanthemi YbiT ortholog plays a role in plant infective fitness. The ldtB-ybiT divergent operon promoter region binds FNR and ybiT expression is activated by FNR (Federowicz, 2014). 3/102 YbiT peptide masses from MS analysis confirm this start codon and indicate that the initial Met is not removed (Maillet, 2007).

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BamHI EcoRI HindIII