GenePage for the ynaE gene of Escherichia coli K-12

Primary Gene Name: ynaE
EcoGene Accession Number: EG13373
K-12 Gene Accession Number: ECK1370
MG1655 Gene Identifier: b1375
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: None
Description: Cold shock gene, function unknown, Rac prophage
  # bp Upstream # bp Downstream
MW: 8751.21 ---------77 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 1433991
Left Intergenic Region

Name: pinR_ynaE

Length: 316 bp gap

Orientation: Codirectional-

Left_end: 1433675

Right_end: 1433990

Centisome: 30.89

Genomic Address
Counterclockwise
Minute or Centisome (%) = 30.89
Right End: 1434224
Right Intergenic Region

Name: ynaE_ttcC

Length: 733 bp gap

Orientation: Codirectional-

Left_end: 1434225

Right_end: 1434957

Centisome: 30.90

YnaE differs from YdfK by one residue. ydfK expression has been shown to be regulated by a 5' UTR thermosensor (Raghavan, 2011). The 349 nt preceding ynaE is 98% identical to the ydfK 5' UTR thermosensor with only six mismatches and therefore the ynaE and ydfK 5' UTRs are probably isofunctional thermosensors.

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BamHI EcoRI HindIII