GenePage for the ydgK gene of Escherichia coli K-12

Primary Gene Name: ydgK
EcoGene Accession Number: EG13932
K-12 Gene Accession Number: ECK1622
MG1655 Gene Identifier: b1626
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: rsxP
Description: DUF2569 family inner membrane protein, function unknown
  # bp Upstream # bp Downstream
MW: 16318.59 ---------146 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 1705250
Left Intergenic Region

Name: cnu_ydgK

Length: 85 bp gap

Orientation: Codirectional+

Left_end: 1705165

Right_end: 1705249

Centisome: 36.74

Genomic Address
Clockwise
Minute or Centisome (%) = 36.74
Right End: 1705690
Right Intergenic Region

Name: ydgK_rsxA

Length: 76 bp gap

Orientation: Codirectional+

Left_end: 1705691

Right_end: 1705766

Centisome: 36.75

ydgK transcripts readthrough into the rsxABCDGE-nth operon (Gifford, 2000). The rsxA promoter is more than five-fold straonger than the the ydgK promoter (Koo, 2003). ydgK is not involved in the reduction of SoxR, but was called rsxP because its promoter contributes to rsx operon expression (Koo, 2003).

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BamHI EcoRI HindIII