GenePage for the yqiG' pseudogene of Escherichia coli K-12

Primary Gene Name: yqiG'
EcoGene Accession Number: EG14228
K-12 Gene Accession Number: ECK3035
MG1655 Gene Identifier: b3046
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: None
Description: Pseudogene reconstruction, FimD family, interrupted by IS2I; fimbrial export usher protein family
  # bp Upstream # bp Downstream
MW: 92103.84 ---------822 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 3186061
Left Intergenic Region

Name: ygiL_yqiG

Length: 95 bp gap

Orientation: Codirectional+

Left_end: 3185966

Right_end: 3186060

Centisome: 68.64

Genomic Address join

The following join statement uses GenBank syntax to describe how the reconstructed IS-interrupted yqiG pseudogene protein sequence was translated from the DNA:

join(3186061..3186090,3187427..3189865)


Clockwise
Minute or Centisome (%) = 68.64
Right End: 3189865
Right Intergenic Region

Name: yqiG_insC9

Length: 96 bp gap

Orientation: Codirectional+

Left_end: 3186091

Right_end: 3186186

Centisome: 68.64

The first 21 aa of YqiG' are predicted to be a type I signal peptide. The first ten amino acids of this reconstruction come from the other side of the IS2I insertion. Probable false positive lipoprotein prediction, Cys not conserved. YqiH (putative fimbrial chaperone), and YqiG' (putative fimbrial export usher protein) are encoded in an IS2I-interrupted putative fim operon.

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BamHI EcoRI HindIII