EcoGene

GenePage for the cydA gene of Escherichia coli K-12

Bacteriome: cydA

CDD-COG: COG1271

CGSC: CG10369

ChemGen Gene Correlations: cydA

ChemGen Growth Data: cydA

Gene-Profiles.org: cydA

Genevestigator: P0ABJ9

GenExpDB: b0733

GenoBaseMG: b0733

Genome3D: P0ABJ9

GenomeReviews: P0ABJ9

GenPept-GenBank: AAC73827

GenPept-RefSeq: NP_415261.2

Inparanoid: NP_415261.2

iProClass: P0ABJ9

iRefWeb: 945341

MicrobesOnline: P0ABJ9

Predicted Regulons: E594

PrFEct-Predict: cydA

ProDom: P0ABJ9

ProteinOntology: 000022361

ProteomeFolding at YRC: P0ABJ9

ProtMap_COG: COG1271#NC_000913

ProtoNet: P0ABJ9

QUARK: E11223

QuickGO: P0ABJ9

RegTransBase: 8801684

RegulonDB-TU: ECK120014458

STRING: b0733

SWISS-2D: P0ABJ9

TF Binding Sites: cydA.html

TIGR-CMR: NT01EC0904

Transimulation: b0733

Unison: P0ABJ9

wikigenes: 945341

WolframAlpha: cydA

xbase-ColiBASE: b0733

Primary Gene Name: cydA
EcoGene Accession Number: EG10173
K-12 Gene Accession Number: ECK0721
MG1655 Gene Identifier: b0733

34 Active Assayable Promoters

Predicted Regulons McCue 2002

Verified Set

Verified Translation Starts (no Met)

Verified Translation Starts Sites

Gene Name Mnemonic: Cytochrome d

Alternate Gene Symbols: None

Description:
Cytochrome d (bd-I) ubiquinol oxidase subunit 1; upregulated in biofilms and microaerobic conditions; aerobically repressed by H-NS; anaerobically repressed by FNR

Pre-Run BlastP UniProt

Protein Sequence ------------ MW: 58205.08------522 aa ------------ Pre-Run BlastP NR+Env

Genomic Address
Left End: 771458 ----------------- Clockwise ----------------- Right End: 773026
Left Inter Gene Info Minute or Centisome (%) = 16.63 Right Inter Gene Info

PDF EcoMap

Curator or user-submitted Comments:

H-NS, FNR and ArcA regulons. ArcA-P antagonizes H-NS repression of cydAB in response to limiting oxygen. Biofilm microarray result was validated with RT-PCR. HT_Cmplx29_Mem: CbdA+CydA.