Escherichia coli K-12 GenePage Master Page of rssA
GenePage for the
rssA
gene of
Escherichia coli
K-12
Bacteriome: rssA
CDD-COG: COG1752
CGSC: CG37468
ChemGen Gene Correlations: rssA
ChemGen Growth Data: rssA
CMR: P0AFR0
Colibri: rssA
COMBREX: 945725
DDBJ: AAC74316
Doodle: b1234
EchoBASE: EB2041
EchoLOCATION: EB2041
ECID: P0AFR0
ECMDB: P0AFR0
EcoliWiki: rssA
eggNOG: P0AFR0
EMBL: AAC74316
eSOL: JW1222
Gene-Profiles.org: rssA
Genevestigator: P0AFR0
GenExpDB: b1234
GenoBaseMG: b1234
Genome3D: P0AFR0
GenomeReviews: P0AFR0
GenPept-GenBank: AAC74316
GenPept-RefSeq: NP_415750.2
GenProtEC: b1234
GORBI: 945725
GREMLIN: P0AFR0
iHOP: 945725
Inparanoid: NP_415750.2
iProClass: P0AFR0
iRefWeb: 945725
Membranome: YCHK_ECOLI
MicrobesOnline: P0AFR0
MiST: 1582508
ModBase: P0AFR0
OMA: P0AFR0
Orthology.org: 999
PairsDB: P0AFR0
PATRIC: 32117724
PDB-UniProt: P0AFR0
Pedant: 1827
PrFEct-Predict: rssA
ProDom: P0AFR0
ProteomeFolding at YRC: P0AFR0
ProtMap_COG: COG1752#NC_000913
ProtoNet: P0AFR0
QUARK: E12822
QuickGO: P0AFR0
RegulonDB-TU: ECK120016653
STRING: b1234
SWISS-2D: P0AFR0
Textpresso y-syn: ychK
TF Binding Sites: ychK.html
TIGR-CMR: NT01EC1501
Transimulation: b1234
Unison: P0AFR0
wikigenes: 945725
WolframAlpha: rssA
xbase-ColiBASE: b1234
Primary Gene Name:
rssA
EcoGene Accession Number: EG12120
K-12 Gene Accession Number: ECK1229
MG1655 Gene Identifier:
b1234
AUG Start Codons
Common Core
CommonCore-5
Y-synonyms
Gene Name Mnemonic: Regulation of Sigma S
Alternate Gene Symbols: ychK
DNA Sequence
  # bp Upstream
# bp Downstream
Description:
Predicted phospholipase, patatin-like family, function unknown
Pre-Run BlastP UniProt
Protein Sequence
------------ MW: 33067.07------301 aa ------------
Pre-Run BlastP NR+Env
Genomic Address
Left End: 1289245 ----------------- Clockwise ----------------- Right End: 1290150
Left Inter Gene Info
Minute or Centisome (%) = 27.79
Right Inter Gene Info
 
gene or min(Cs)
PDF EcoMap
Curator or user-submitted Comments:
The patatin-like family (also known as the NTE family) pfam01734 contains proteins with a predicted phospholipase domain. YjjU and RssA(YchK) are distant homologs of the pfam01734 superfamily; RssA (COG1752 family) appears to be a core gene while YjjU (COG4667 family) appears to be a horizontal transfer. A previous report of unpublished data reporting an rssA mutant has elevated RpoS levels is due to polarity on rssB (Muffler, 1996; Ruiz, 2001).
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