EcoGene

GenePage for the rssA gene of Escherichia coli K-12

Bacteriome: rssA

CDD-COG: COG1752

CGSC: CG37468

ChemGen Gene Correlations: rssA

ChemGen Growth Data: rssA

Gene-Profiles.org: rssA

Genevestigator: P0AFR0

GenExpDB: b1234

GenoBaseMG: b1234

Genome3D: P0AFR0

GenomeReviews: P0AFR0

GenPept-GenBank: AAC74316

GenPept-RefSeq: NP_415750.2

Inparanoid: NP_415750.2

iProClass: P0AFR0

iRefWeb: 945725

Membranome: YCHK_ECOLI

MicrobesOnline: P0AFR0

ProteomeFolding at YRC: P0AFR0

ProtMap_COG: COG1752#NC_000913

ProtoNet: P0AFR0

QUARK: E12822

QuickGO: P0AFR0

RegulonDB-TU: ECK120016653

STRING: b1234

SWISS-2D: P0AFR0

Textpresso y-syn: ychK

TF Binding Sites: ychK.html

TIGR-CMR: NT01EC1501

Transimulation: b1234

Unison: P0AFR0

wikigenes: 945725

WolframAlpha: rssA

xbase-ColiBASE: b1234

Primary Gene Name: rssA
EcoGene Accession Number: EG12120
K-12 Gene Accession Number: ECK1229
MG1655 Gene Identifier: b1234

Gene Name Mnemonic: Regulation of Sigma S

Alternate Gene Symbols: ychK

Description:
Predicted phospholipase, patatin-like family, function unknown

Pre-Run BlastP UniProt

Protein Sequence ------------ MW: 33067.07------301 aa ------------ Pre-Run BlastP NR+Env

Genomic Address
Left End: 1289245 ----------------- Clockwise ----------------- Right End: 1290150
Left Inter Gene Info Minute or Centisome (%) = 27.79 Right Inter Gene Info

PDF EcoMap

Curator or user-submitted Comments:

The patatin-like family (also known as the NTE family) pfam01734 contains proteins with a predicted phospholipase domain. YjjU and RssA(YchK) are distant homologs of the pfam01734 superfamily; RssA (COG1752 family) appears to be a core gene while YjjU (COG4667 family) appears to be a horizontal transfer. A previous report of unpublished data reporting an rssA mutant has elevated RpoS levels is due to polarity on rssB (Muffler, 1996; Ruiz, 2001).