Escherichia coli K-12 GenePage Master Page of ybiT
GenePage for the
ybiT
gene of
Escherichia coli
K-12
APEX: 230.21
Bacteriome: ybiT
CDD-COG: COG0488
ChemGen Gene Correlations: ybiT
ChemGen Growth Data: ybiT
CMR: P0A9U3
Colibri: ybiT
COMBREX: 945440
DDBJ: AAC73907
Doodle: b0820
EchoBASE: EB3109
EchoLOCATION: EB3109
ECID: P0A9U3
ECMDB: P0A9U3
EcoliWiki: ybiT
eggNOG: P0A9U3
EMBL: AAC73907
eSOL: JW0804
Gene-Profiles.org: ybiT
Genevestigator: P0A9U3
GenExpDB: b0820
GenoBaseMG: b0820
Genome3D: P0A9U3
GenomeReviews: P0A9U3
GenPept-GenBank: AAC73907
GenPept-RefSeq: NP_415341.1
GenProtEC: b0820
GORBI: 945440
GREMLIN: P0A9U3
iHOP: 945440
Inparanoid: NP_415341.1
iProClass: P0A9U3
iRefWeb: 945440
Membranome: YBIT_ECOLI
MicrobesOnline: P0A9U3
MiST: 1582095
ModBase: P0A9U3
OMA: P0A9U3
Orthology.org: 589
PairsDB: P0A9U3
PATRIC: 32116843
PDB-UniProt: P0A9U3
Pedant: 2028
PrFEct-Predict: ybiT
ProDom: P0A9U3
ProteomeFolding at YRC: P0A9U3
ProtMap_COG: COG0488#NC_000913
ProtoNet: P0A9U3
QUARK: E13362
QuickGO: P0A9U3
STRING: b0820
SWISS-2D: P0A9U3
TF Binding Sites: ybiT.html
TIGR-CMR: NT01EC1008
Transimulation: b0820
Unison: P0A9U3
wikigenes: 945440
WolframAlpha: ybiT
xbase-ColiBASE: b0820
Primary Gene Name:
ybiT
EcoGene Accession Number: EG13325
K-12 Gene Accession Number: ECK0810
MG1655 Gene Identifier:
b0820
AAA+ ATPases
ABC-F Family ATPases
APEX
Biofilm Genes
BioFilm1
Common Core
CommonCore-5
GUG Start Codons
Y-genes
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: None
DNA Sequence
  # bp Upstream
# bp Downstream
Description:
ABC-F family putative regulatory ATPase, function unknown
Pre-Run BlastP UniProt
Protein Sequence
------------ MW: 59858.00------530 aa ------------
Pre-Run BlastP NR+Env
Genomic Address
Left End: 855963 ----------------- Clockwise ----------------- Right End: 857555
Left Inter Gene Info
Minute or Centisome (%) = 18.45
Right Inter Gene Info
 
gene or min(Cs)
PDF EcoMap
Curator or user-submitted Comments:
YbiT is a procaryotic ABC-F family member defined by two ABC transporter-related predicted ATP-binding domains (Pfam:PF0005) joined by a linker domain (Pfam: PF12848); other ABC-F family members include eucaryotic translation-related factors and the E. coli K-12 proteins EttA, Uup, and YheS (Boël, 2014; Chen, 2014). The E. chrysanthemi YbiT ortholog plays a role in plant infective fitness. The ldtB-ybiT divergent operon promoter region binds FNR and ybiT expression is activated by FNR (Federowicz, 2014). 3/102 YbiT peptide masses from MS analysis confirm this start codon and indicate that the initial Met is not removed (Maillet, 2007).
Copyright 2006 University of Miami.
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