EcoGene

GenePage for the ybiT gene of Escherichia coli K-12

APEX: 230.21

Bacteriome: ybiT

CDD-COG: COG0488

ChemGen Gene Correlations: ybiT

ChemGen Growth Data: ybiT

Gene-Profiles.org: ybiT

Genevestigator: P0A9U3

GenExpDB: b0820

GenoBaseMG: b0820

Genome3D: P0A9U3

GenomeReviews: P0A9U3

GenPept-GenBank: AAC73907

GenPept-RefSeq: NP_415341.1

Inparanoid: NP_415341.1

iProClass: P0A9U3

iRefWeb: 945440

MicrobesOnline: P0A9U3

ProteomeFolding at YRC: P0A9U3

ProtMap_COG: COG0488#NC_000913

TF Binding Sites: ybiT.html

TIGR-CMR: NT01EC1008

Transimulation: b0820

Unison: P0A9U3

wikigenes: 945440

WolframAlpha: ybiT

xbase-ColiBASE: b0820

Primary Gene Name: ybiT
EcoGene Accession Number: EG13325
K-12 Gene Accession Number: ECK0810
MG1655 Gene Identifier: b0820

Gene Name Mnemonic: Systematic nomenclature

Alternate Gene Symbols: None

Description:
ABC-F family putative regulatory ATPase, function unknown

Pre-Run BlastP UniProt

Protein Sequence ------------ MW: 59858.00------530 aa ------------ Pre-Run BlastP NR+Env

Genomic Address
Left End: 855963 ----------------- Clockwise ----------------- Right End: 857555
Left Inter Gene Info Minute or Centisome (%) = 18.45 Right Inter Gene Info

PDF EcoMap

Curator or user-submitted Comments:

YbiT is a procaryotic ABC-F family member defined by two ABC transporter-related predicted ATP-binding domains (Pfam:PF0005) joined by a linker domain (Pfam: PF12848); other ABC-F family members include eucaryotic translation-related factors and the E. coli K-12 proteins EttA, Uup, and YheS (Boël, 2014; Chen, 2014). The E. chrysanthemi YbiT ortholog plays a role in plant infective fitness. The ldtB-ybiT divergent operon promoter region binds FNR and ybiT expression is activated by FNR (Federowicz, 2014). 3/102 YbiT peptide masses from MS analysis confirm this start codon and indicate that the initial Met is not removed (Maillet, 2007).