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Bibliography (10 total) : Review Only   Up

• 2013


• Liang LW, Hussein R, Block DH, Lim HN (2013) Minimal effect of gene clustering on expression in Escherichia coli. Genetics 193:453-65



• 2012


• Moreno-Hagelsieb G, Jokic P (2012) The evolutionary dynamics of functional modules and the extraordinary plasticity of regulons: the Escherichia coli perspective. Nucleic Acids Res 40:7104-12



• Tsoy OV, Pyatnitskiy MA, Kazanov MD, Gelfand MS (2012) Evolution of transcriptional regulation in closely related bacteria. BMC Evol Biol 12:200



• 2011


• Rubinstein ND, Zeevi D, Oren Y, Segal G, Pupko T (2011) The operonic location of auto-transcriptional repressors is highly conserved in bacteria. Mol Biol Evol 28:3309-18



• Lim HN, Lee Y, Hussein R (2011) Fundamental relationship between operon organization and gene expression. Proc Natl Acad Sci U S A 108:10626-31



• 2010


• Yin Y, Zhang H, Olman V, Xu Y (2010) Genomic arrangement of bacterial operons is constrained by biological pathways encoded in the genome. Proc Natl Acad Sci U S A 107:6310-5



• Zhang M, Leong HW (2010) Bidirectional best hit r-window gene clusters. BMC Bioinformatics 11 Suppl 1:S63



• 2009


• Zhang M, Leong HW (2009) Gene team tree: a hierarchical representation of gene teams for all gap lengths. J Comput Biol 16:1383-98



• Kovács K, Hurst LD, Papp B (2009) Stochasticity in protein levels drives colinearity of gene order in metabolic operons of Escherichia coli. PLoS Biol 7:e1000115



• 2007


• Wang S, Wang Y, Du W, Sun F, Wang X, Zhou C, Liang Y (2007) A multi-approaches-guided genetic algorithm with application to operon prediction. Artif Intell Med 41:151-9