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TopicPage for IMemProt Pred of Escherichia coli K-12

Inner Membrane Proteome

Description:

Inner Membrane Proteins, Predicted by TMHMM , no experimental data or verified paralogs, >100 aa

Details:

Daley (2005) listed 124 Inner Membrane proteins that were predicted using TMHMM , but without direct experimental data or verified paralogs, if they were >100 amino acids long. These 124 predicted Inner Membrane proteins without predicted C-tails topologies are grouped in this subTopic and can be retrieved as a GeneSet.

Bibliography (3 total) : Review Only Up

2005

Daley DO, Rapp M, Granseth E, Melén K, Drew D, von Heijne G (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308:1321-3

2001

Möller S, Croning MD, Apweiler R (2001) Evaluation of methods for the prediction of membrane spanning regions. Bioinformatics 17:646-53

Krogh A, Larsson B, von Heijne G, Sonnhammer EL (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305:567-80

TopicPage for IMemProt Pred of Escherichia coli K-12

Description:

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document.writeln('<img id="all" src="closed.png" width=15 height=8 alt="Open list" onClick="toggleall();">');Bibliography (3 total) : Review Only Up

Bibliography (3 total) : Review Only Up